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The map label for this gene is 94984342

Identifier: 94984342

GI number: 94984342

Start: 219242

End: 220270

Strand: Reverse

Name: 94984342

Synonym: Dgeo_0234

Alternate gene names: NA

Gene position: 220270-219242 (Counterclockwise)

Preceding gene: 94984343

Following gene: 94984341

Centisome position: 8.93

GC content: 65.4

Gene sequence:

>1029_bases
GTGAGACAACTTCTCAACACCCTCTACATCCAGACCCAGGGCACCTACCTGCACCTTGACACCGACAACATCCGGGTCGA
GGTGGAGCGAACAAAGAAGGCGATGCTGCCCCTGCACCACATCGAGGGCGTGGTGGTGTTCGGCAACGTGCTGCTCTCGC
CCTTTCTGATTCACCGCCTCGCCCGCGAGCACAAGCCGGTCACCTGGCTGAGCGAACACGGGCGCTTCATGGCCCGCACC
GAAACGCCGATGAGCGGAAACGTCCTCCTGCGAACGGCCCAGCACGCCTGCGCAGGGAATGCCGCAAGAACGCTGGCCAT
CGCCCGCCTGATTGCCGCTGGGAAGCTCCAGAATCAGAAAGTCACCCTGCTGCGCGCGGCTCGCGAAGCAGAAGCCGACG
ACGCCGCGCTGCTGCGCCAAGCCGCCCGTGACATCAACGTCCAGATCGCCTGCCTCCCCCTGACCGAGACGGTGGACGAG
GTCCGCGGCACCGAGGGCACCGCCGCTCGCCTCTACTGGGAGGTCTTCCCGCTCATGCTGCGGCAAAACCGCGATTTCTT
CTGGCTCTCGGAGCGCCACCGCCGCCCGGCCCGCGACCCCATCAATGCCCTGCTGAACTTCGTGTACACCGTGCTGGCCA
ATGACTGTGCCTCAGCGTGTCAGGCGGTGGGTCTTGACCCGCAGCTCGGCTTCCTGCACGCCCTGCGTCCGGGCAGAAGC
AGCCTGGCCCTCGACCTCATGGAAGAACTGCGCCCCGTCATCGCCGACCGTGCCATCCTCACCCTGATTAACCGCCAGCA
GCTCACCCCTCGCGACTTTGTGCTGCATGAGGGCGGCACTGTCAGCATCACCGAAGAGGGACGCAAAACCATTCTGGCGC
ATCTGGCTGAACGCCGCCGGGAGGAAGTCATGCACCCCCTCACCGCCCGCAAAACTCCGCTGGGGCTGCTGTCACACGTT
CAGGCTCGTCTGCTTGCCCAGCACCTCCGCGGTGACCGCCCCCATTACCCCCCCTACCTGCACCGATGA

Upstream 100 bases:

>100_bases
ACCGTTGCCACTGGTGCAGTCTCCAGGAGGCGTGCGAACCCTTCACGCCCCGCGACTTTCCACACGGCTATGATCCCTTC
AGTACCTCTCTCGAGGACAT

Downstream 100 bases:

>100_bases
TCGACCTGCTGATCTGCTACGACATCGCCACCCAGACCGAAGCAGGCCGCAAGCGCCTGCGCCGAGTCGCCAAAGTCTGC
GTGGCCCACGGCCAACGGGT

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRQLLNTLYIQTQGTYLHLDTDNIRVEVERTKKAMLPLHHIEGVVVFGNVLLSPFLIHRLAREHKPVTWLSEHGRFMART
ETPMSGNVLLRTAQHACAGNAARTLAIARLIAAGKLQNQKVTLLRAAREAEADDAALLRQAARDINVQIACLPLTETVDE
VRGTEGTAARLYWEVFPLMLRQNRDFFWLSERHRRPARDPINALLNFVYTVLANDCASACQAVGLDPQLGFLHALRPGRS
SLALDLMEELRPVIADRAILTLINRQQLTPRDFVLHEGGTVSITEEGRKTILAHLAERRREEVMHPLTARKTPLGLLSHV
QARLLAQHLRGDRPHYPPYLHR

Sequences:

>Translated_342_residues
MRQLLNTLYIQTQGTYLHLDTDNIRVEVERTKKAMLPLHHIEGVVVFGNVLLSPFLIHRLAREHKPVTWLSEHGRFMART
ETPMSGNVLLRTAQHACAGNAARTLAIARLIAAGKLQNQKVTLLRAAREAEADDAALLRQAARDINVQIACLPLTETVDE
VRGTEGTAARLYWEVFPLMLRQNRDFFWLSERHRRPARDPINALLNFVYTVLANDCASACQAVGLDPQLGFLHALRPGRS
SLALDLMEELRPVIADRAILTLINRQQLTPRDFVLHEGGTVSITEEGRKTILAHLAERRREEVMHPLTARKTPLGLLSHV
QARLLAQHLRGDRPHYPPYLHR
>Mature_342_residues
MRQLLNTLYIQTQGTYLHLDTDNIRVEVERTKKAMLPLHHIEGVVVFGNVLLSPFLIHRLAREHKPVTWLSEHGRFMART
ETPMSGNVLLRTAQHACAGNAARTLAIARLIAAGKLQNQKVTLLRAAREAEADDAALLRQAARDINVQIACLPLTETVDE
VRGTEGTAARLYWEVFPLMLRQNRDFFWLSERHRRPARDPINALLNFVYTVLANDCASACQAVGLDPQLGFLHALRPGRS
SLALDLMEELRPVIADRAILTLINRQQLTPRDFVLHEGGTVSITEEGRKTILAHLAERRREEVMHPLTARKTPLGLLSHV
QARLLAQHLRGDRPHYPPYLHR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 38677; Mature: 38677

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLLNTLYIQTQGTYLHLDTDNIRVEVERTKKAMLPLHHIEGVVVFGNVLLSPFLIHRL
CHHHHHHHEEEECCCEEEEECCCEEEEEEHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH
AREHKPVTWLSEHGRFMARTETPMSGNVLLRTAQHACAGNAARTLAIARLIAAGKLQNQK
HHHCCCCEEHHHCCCEEEECCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCCH
VTLLRAAREAEADDAALLRQAARDINVQIACLPLTETVDEVRGTEGTAARLYWEVFPLML
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
RQNRDFFWLSERHRRPARDPINALLNFVYTVLANDCASACQAVGLDPQLGFLHALRPGRS
HCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
SLALDLMEELRPVIADRAILTLINRQQLTPRDFVLHEGGTVSITEEGRKTILAHLAERRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCEEEECHHHHHHHHHHHHHHHH
EEVMHPLTARKTPLGLLSHVQARLLAQHLRGDRPHYPPYLHR
HHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRQLLNTLYIQTQGTYLHLDTDNIRVEVERTKKAMLPLHHIEGVVVFGNVLLSPFLIHRL
CHHHHHHHEEEECCCEEEEECCCEEEEEEHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH
AREHKPVTWLSEHGRFMARTETPMSGNVLLRTAQHACAGNAARTLAIARLIAAGKLQNQK
HHHCCCCEEHHHCCCEEEECCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCCH
VTLLRAAREAEADDAALLRQAARDINVQIACLPLTETVDEVRGTEGTAARLYWEVFPLML
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
RQNRDFFWLSERHRRPARDPINALLNFVYTVLANDCASACQAVGLDPQLGFLHALRPGRS
HCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
SLALDLMEELRPVIADRAILTLINRQQLTPRDFVLHEGGTVSITEEGRKTILAHLAERRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCEEEECHHHHHHHHHHHHHHHH
EEVMHPLTARKTPLGLLSHVQARLLAQHLRGDRPHYPPYLHR
HHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]