| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984320
Identifier: 94984320
GI number: 94984320
Start: 197647
End: 198513
Strand: Reverse
Name: 94984320
Synonym: Dgeo_0212
Alternate gene names: NA
Gene position: 198513-197647 (Counterclockwise)
Preceding gene: 94984321
Following gene: 94984319
Centisome position: 8.05
GC content: 71.86
Gene sequence:
>867_bases GTGACCCAGTCGCCTTCCCCCCCCGACCTGCAAGCGGCCTTCCGCGCCCGCGGCTACGTGGCGGGGGACGCCCTTGTCAC CGCCTTGCGGCTGGTGGTGGCGCTGGGCAAACCGCTGCTCCTGGAAGGCCCGGCAGGCGTCGGTAAAACCGAGGCAGCCA AGACGCTGGCGGCCGCCCTTGGGACGCGCCTGATCCGCCTCCAGTGTTACGAGGGGCTGGACGCCCAGGCCGCCCTGTAC GAGTGGAACTACGCCCGCCAGCTCCTGCACCTGCGCGCCGCCGAGGTGAGCGGCCGGGCCGTCAGCGACGCCGACCTCTA CGGCCCGCAGTTCCTGATGCAGCGCCCCCTCTTGGAGGCGATTCGCCAGGAGGTGCCGCCGGTTCTGCTGATCGACGAGG TGGACCGCGCCGACGACGCCTTTGAAGCCTTCCTGCTGGAGCTGCTGGCCGAGTGGCAGGTGACGGTGCCGGAACTGGGC ACCCTGACGGCCATCGCCCGTCCCCATGTTCTCTTGACCAGCAACCGCGCCCGCGAACTCAGTGACGCCCTGCGGCGCCG CTGCCTCTACCTCTGGGTGGACTATCCCACCGAGGCGCAGGAACTGGAGATCGTGCGCGCCCGGCTGCCCGGCATCCAGG AGACGCTGGCCGCGCAGGTCACGCGGGCGGTCCACGCCCTGCGCGAGCTGCCGCTGGGCAAGCCGCCGGGCGTGGCCGAA ACGCTCGACTGGGCCGCCGCGCTGGTCGCCCTGCACCGCGACTGGCTCGACGCCGAGGCGCTCGACCTCACGCTGGGGGC GGTGCTGAAGCTGCACGAGGATCAGCAGCTGGCCCGCGCGACCCTGCACAAGCTTGCTCCCCCATGA
Upstream 100 bases:
>100_bases CAGTGGGCGGGCGCGTGCTGGACGCGCAGGCGCAGAAACTCATTCGGCAGACCTTCCAGAACCTGAGCGCGCAGGTGGAG GCTCGCGCCGACACCCTGGC
Downstream 100 bases:
>100_bases CCGCTCCCCTTCCCGCCGACCTCAGCGCCCGGGTGGTGGCCCTGGTTACACACCTGCGCGCTGCGCACGGCTTTCGGGTG GGACCGGGCGAGGCAGCGGC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase AAA Family Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTQSPSPPDLQAAFRARGYVAGDALVTALRLVVALGKPLLLEGPAGVGKTEAAKTLAAALGTRLIRLQCYEGLDAQAALY EWNYARQLLHLRAAEVSGRAVSDADLYGPQFLMQRPLLEAIRQEVPPVLLIDEVDRADDAFEAFLLELLAEWQVTVPELG TLTAIARPHVLLTSNRARELSDALRRRCLYLWVDYPTEAQELEIVRARLPGIQETLAAQVTRAVHALRELPLGKPPGVAE TLDWAAALVALHRDWLDAEALDLTLGAVLKLHEDQQLARATLHKLAPP
Sequences:
>Translated_288_residues MTQSPSPPDLQAAFRARGYVAGDALVTALRLVVALGKPLLLEGPAGVGKTEAAKTLAAALGTRLIRLQCYEGLDAQAALY EWNYARQLLHLRAAEVSGRAVSDADLYGPQFLMQRPLLEAIRQEVPPVLLIDEVDRADDAFEAFLLELLAEWQVTVPELG TLTAIARPHVLLTSNRARELSDALRRRCLYLWVDYPTEAQELEIVRARLPGIQETLAAQVTRAVHALRELPLGKPPGVAE TLDWAAALVALHRDWLDAEALDLTLGAVLKLHEDQQLARATLHKLAPP >Mature_287_residues TQSPSPPDLQAAFRARGYVAGDALVTALRLVVALGKPLLLEGPAGVGKTEAAKTLAAALGTRLIRLQCYEGLDAQAALYE WNYARQLLHLRAAEVSGRAVSDADLYGPQFLMQRPLLEAIRQEVPPVLLIDEVDRADDAFEAFLLELLAEWQVTVPELGT LTAIARPHVLLTSNRARELSDALRRRCLYLWVDYPTEAQELEIVRARLPGIQETLAAQVTRAVHALRELPLGKPPGVAET LDWAAALVALHRDWLDAEALDLTLGAVLKLHEDQQLARATLHKLAPP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31551; Mature: 31420
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSPSPPDLQAAFRARGYVAGDALVTALRLVVALGKPLLLEGPAGVGKTEAAKTLAAAL CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH GTRLIRLQCYEGLDAQAALYEWNYARQLLHLRAAEVSGRAVSDADLYGPQFLMQRPLLEA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH IRQEVPPVLLIDEVDRADDAFEAFLLELLAEWQVTVPELGTLTAIARPHVLLTSNRAREL HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCHHHHH SDALRRRCLYLWVDYPTEAQELEIVRARLPGIQETLAAQVTRAVHALRELPLGKPPGVAE HHHHHHCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLDWAAALVALHRDWLDAEALDLTLGAVLKLHEDQQLARATLHKLAPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure TQSPSPPDLQAAFRARGYVAGDALVTALRLVVALGKPLLLEGPAGVGKTEAAKTLAAAL CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH GTRLIRLQCYEGLDAQAALYEWNYARQLLHLRAAEVSGRAVSDADLYGPQFLMQRPLLEA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH IRQEVPPVLLIDEVDRADDAFEAFLLELLAEWQVTVPELGTLTAIARPHVLLTSNRAREL HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCHHHHH SDALRRRCLYLWVDYPTEAQELEIVRARLPGIQETLAAQVTRAVHALRELPLGKPPGVAE HHHHHHCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLDWAAALVALHRDWLDAEALDLTLGAVLKLHEDQQLARATLHKLAPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA