Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94984319

Identifier: 94984319

GI number: 94984319

Start: 196406

End: 197650

Strand: Reverse

Name: 94984319

Synonym: Dgeo_0211

Alternate gene names: NA

Gene position: 197650-196406 (Counterclockwise)

Preceding gene: 94984320

Following gene: 94984316

Centisome position: 8.01

GC content: 75.42

Gene sequence:

>1245_bases
ATGACCGCTCCCCTTCCCGCCGACCTCAGCGCCCGGGTGGTGGCCCTGGTTACACACCTGCGCGCTGCGCACGGCTTTCG
GGTGGGACCGGGCGAGGCAGCGGCGGCCCTGCAAGCCCTGAACGCGGTGGACCTGGGGCGCCCCGGCGAGGTCCGCGACG
CCCTGCGCGCTGTGCTGACCGCCAGCCGGGAAGAGGGCCTGATCTTCGACGCGGCCTTCGATGCCTTTTTCCGCCTACCC
GGGGCGCCACCCCCGCCCCGGTTGCCTCCCCTGCTCCCGCGGACGGACGCCCCCCTGCCCCCTCCCTCACCTGCGCGGCA
GGGCGCGGCGGGCCAGGAGCGGCGCGTTCCCGGTCAGGCCCGCGCGGAAGAGGCAGAGACGGACGCCCCTTCCCCGACCA
CTCGCCCCGGCCCGGAGCGCCAGACGGAAGGCGCGCCGGAAGGAGCCGCCCGGCCGCTCAGTGCCCGCCTGAGTCCGAAC
GCGGGAGCCGGGGGCCAGGTGGAGGCGCCAGGGGGTGACCTGCCGGACTTGTTGCGCGCGGCGGGGGTGCTGGTGCGAGC
GGTGGAACTGGGGCGCTCAAGGCGGCTGACGCCTCAGGCCCGTGGCTCGCGCCTGGACGCGCGGCGGACCTTGCGAGCGG
CGGCGCGGACGGCGGGTGACCCTGTCCGGCTGCGCTGGCTGGGCCGACCCCGGCGCGCGCCCCACTTCCTGCTGGTGCTG
GACGGCAGCCGCAGCATGGGTCCCAGTGCGACCTTGCTGCTGCGCTTCGCCTTTGCCCTGCACCTGCGCGCGCGGCGGGT
GGAGGTGTACGCCTTCAGCACCGGCCTCACCCGCCTGACCCCCCGGCTGCGGGCCGCGCGCCCCGGCGAGGCGCTGCATC
TCCCCGACCTGGGCGACGCCTGGGGCGGTGGCACCCGCATCGGGGAGAACCTGCTGCGGCTGACCCGGGAGGAACGCGCT
CGGGTGAACCGCGACACGGTGGTCTTGATCCTCAGTGACGGTCTGGACACCGGCGACCCAGAGGTGCTGACTCGCGCCCT
GCGTGACCTGCGGGCCAGGGCAGGCCTGCTGGTGTGGCTCTCGCCGCTGGCCGCCCTGCCCGGCTATCAGCCCATCCAGC
GGGCGGTGCGGGCGGCCCTGCCGTATCTGGACGCCTTTTTGCCCGCCGGGGGGGTGGCCGACCTCGCCGTATTGGGGTGG
CGGCTGCGCACGTCAGGGAGCCCAAGACACACCCAGACGGACTGA

Upstream 100 bases:

>100_bases
GGCTCGACGCCGAGGCGCTCGACCTCACGCTGGGGGCGGTGCTGAAGCTGCACGAGGATCAGCAGCTGGCCCGCGCGACC
CTGCACAAGCTTGCTCCCCC

Downstream 100 bases:

>100_bases
CTCACCAGGTGGCTGAGGATCAAGTGACAAAGCCACACGCGCAGAGAAAGGCGCCGGCAAGCAGTGCTGGGCCGCTGAGG
GGGTCTGCCTGCTTCCTCAG

Product: VWA containing CoxE-like protein

Products: NA

Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase CoxE Subunit

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTAPLPADLSARVVALVTHLRAAHGFRVGPGEAAAALQALNAVDLGRPGEVRDALRAVLTASREEGLIFDAAFDAFFRLP
GAPPPPRLPPLLPRTDAPLPPPSPARQGAAGQERRVPGQARAEEAETDAPSPTTRPGPERQTEGAPEGAARPLSARLSPN
AGAGGQVEAPGGDLPDLLRAAGVLVRAVELGRSRRLTPQARGSRLDARRTLRAAARTAGDPVRLRWLGRPRRAPHFLLVL
DGSRSMGPSATLLLRFAFALHLRARRVEVYAFSTGLTRLTPRLRAARPGEALHLPDLGDAWGGGTRIGENLLRLTREERA
RVNRDTVVLILSDGLDTGDPEVLTRALRDLRARAGLLVWLSPLAALPGYQPIQRAVRAALPYLDAFLPAGGVADLAVLGW
RLRTSGSPRHTQTD

Sequences:

>Translated_414_residues
MTAPLPADLSARVVALVTHLRAAHGFRVGPGEAAAALQALNAVDLGRPGEVRDALRAVLTASREEGLIFDAAFDAFFRLP
GAPPPPRLPPLLPRTDAPLPPPSPARQGAAGQERRVPGQARAEEAETDAPSPTTRPGPERQTEGAPEGAARPLSARLSPN
AGAGGQVEAPGGDLPDLLRAAGVLVRAVELGRSRRLTPQARGSRLDARRTLRAAARTAGDPVRLRWLGRPRRAPHFLLVL
DGSRSMGPSATLLLRFAFALHLRARRVEVYAFSTGLTRLTPRLRAARPGEALHLPDLGDAWGGGTRIGENLLRLTREERA
RVNRDTVVLILSDGLDTGDPEVLTRALRDLRARAGLLVWLSPLAALPGYQPIQRAVRAALPYLDAFLPAGGVADLAVLGW
RLRTSGSPRHTQTD
>Mature_413_residues
TAPLPADLSARVVALVTHLRAAHGFRVGPGEAAAALQALNAVDLGRPGEVRDALRAVLTASREEGLIFDAAFDAFFRLPG
APPPPRLPPLLPRTDAPLPPPSPARQGAAGQERRVPGQARAEEAETDAPSPTTRPGPERQTEGAPEGAARPLSARLSPNA
GAGGQVEAPGGDLPDLLRAAGVLVRAVELGRSRRLTPQARGSRLDARRTLRAAARTAGDPVRLRWLGRPRRAPHFLLVLD
GSRSMGPSATLLLRFAFALHLRARRVEVYAFSTGLTRLTPRLRAARPGEALHLPDLGDAWGGGTRIGENLLRLTREERAR
VNRDTVVLILSDGLDTGDPEVLTRALRDLRARAGLLVWLSPLAALPGYQPIQRAVRAALPYLDAFLPAGGVADLAVLGWR
LRTSGSPRHTQTD

Specific function: Unknown

COG id: COG3552

COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44097; Mature: 43966

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLPADLSARVVALVTHLRAAHGFRVGPGEAAAALQALNAVDLGRPGEVRDALRAVLT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ASREEGLIFDAAFDAFFRLPGAPPPPRLPPLLPRTDAPLPPPSPARQGAAGQERRVPGQA
HCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH
RAEEAETDAPSPTTRPGPERQTEGAPEGAARPLSARLSPNAGAGGQVEAPGGDLPDLLRA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
AGVLVRAVELGRSRRLTPQARGSRLDARRTLRAAARTAGDPVRLRWLGRPRRAPHFLLVL
HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE
DGSRSMGPSATLLLRFAFALHLRARRVEVYAFSTGLTRLTPRLRAARPGEALHLPDLGDA
CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHCHHHHCCCCCCEEECCCCCCC
WGGGTRIGENLLRLTREERARVNRDTVVLILSDGLDTGDPEVLTRALRDLRARAGLLVWL
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHH
SPLAALPGYQPIQRAVRAALPYLDAFLPAGGVADLAVLGWRLRTSGSPRHTQTD
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TAPLPADLSARVVALVTHLRAAHGFRVGPGEAAAALQALNAVDLGRPGEVRDALRAVLT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ASREEGLIFDAAFDAFFRLPGAPPPPRLPPLLPRTDAPLPPPSPARQGAAGQERRVPGQA
HCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH
RAEEAETDAPSPTTRPGPERQTEGAPEGAARPLSARLSPNAGAGGQVEAPGGDLPDLLRA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
AGVLVRAVELGRSRRLTPQARGSRLDARRTLRAAARTAGDPVRLRWLGRPRRAPHFLLVL
HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE
DGSRSMGPSATLLLRFAFALHLRARRVEVYAFSTGLTRLTPRLRAARPGEALHLPDLGDA
CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHCHHHHCCCCCCEEECCCCCCC
WGGGTRIGENLLRLTREERARVNRDTVVLILSDGLDTGDPEVLTRALRDLRARAGLLVWL
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHH
SPLAALPGYQPIQRAVRAALPYLDAFLPAGGVADLAVLGWRLRTSGSPRHTQTD
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA