Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94984263

Identifier: 94984263

GI number: 94984263

Start: 144734

End: 145267

Strand: Reverse

Name: 94984263

Synonym: Dgeo_0155

Alternate gene names: NA

Gene position: 145267-144734 (Counterclockwise)

Preceding gene: 94984265

Following gene: 94984259

Centisome position: 5.89

GC content: 68.91

Gene sequence:

>534_bases
ATGCCAGACCCACTCATCTTCACTGCCGGGACAGGCACTGAGGCGAACCCCGAACCGACCGAACCGGCCCCGGATGCGGG
GAGCCGACCCTTCCAGCGCATCGCCGTCGGCATCGACTTTTCACCTGCCTCGCTGCACGCGCTGGACGTGACCCGCACGC
GTTTCCCGGGAGCGCGGCTGCGGCTGCTGCACGTTACCGACGCTCGCGTGGCCACCACGCCCGACCTGGGAGGTGGTGTG
ATTCCAACTGGACCCAGTTCAGCCTTGCTGCAGACGCTGGAGACGGCTGACGCCGACCGCCTGGCACAGCTGGCCCAAGG
CAGCGAGGAGACCGAGCTGCTGGTGGGCGATCCAGTGACCGGGATTCTGGACGCCGCCGAGCGCTGGGGCGCCGAGCTGA
TCGTGGTGGGCACCCACGCGCAAGGCGCCATTGAGCATTTCTTGCTGGGCAGCAGTGCCGAGAAGCTGATCTCCCGCAGC
TCGGTCCCGGTTCTGACGGTCCGGCTTCCCCGCGCCCAGGCAGCCCGGCGCTGA

Upstream 100 bases:

>100_bases
GACTTGCATGCACGCAGTGTGCGCCCTCCTGTTCCCGGGCAGACTTTACCCGCCCTTCAGACAGCGGGCAGAACGGCAGA
GCACGGTGTAGGTTCGGCAC

Downstream 100 bases:

>100_bases
GGATCTCCTGCTCTGCTCTCCGGCCTTCCCCGACCGCGCCGCCAGAAGACCCTGGCACCCTGGCCGCGCGGGTGAGGAGT
GCCGCGGCTAGGGTGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGV
IPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRS
SVPVLTVRLPRAQAARR

Sequences:

>Translated_177_residues
MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGV
IPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRS
SVPVLTVRLPRAQAARR
>Mature_176_residues
PDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGVI
PTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSS
VPVLTVRLPRAQAARR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18511; Mature: 18380

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARL
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE
RLLHVTDARVATTPDLGGGVIPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVT
EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCH
GILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSSVPVLTVRLPRAQAARR
HHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHCCC
>Mature Secondary Structure 
PDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARL
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE
RLLHVTDARVATTPDLGGGVIPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVT
EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCH
GILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSSVPVLTVRLPRAQAARR
HHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA