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The map label for this gene is apl [H]

Identifier: 94984203

GI number: 94984203

Start: 89945

End: 90562

Strand: Reverse

Name: apl [H]

Synonym: Dgeo_0095

Alternate gene names: 94984203

Gene position: 90562-89945 (Counterclockwise)

Preceding gene: 94984205

Following gene: 94984200

Centisome position: 3.67

GC content: 65.21

Gene sequence:

>618_bases
ATGGCCGACTGGGTGCAGAACCTGATGGACAGCCTGGGGTACCTGGGCATCCTGCTGCTGATGATTGTGGAAAATCTCTT
CCCACCGATCCCCAGCGAGCTGATCATGCCGTCGGCAGGCTTTGCCGCGTCACGTGGGGACCTAAATCTGCTCCTGGTCA
TCGCGGTCGGGACGTTGGGGAGCGTGCTGGGAACCCTCCCGCTCTACTACCTGGGGCGGGCCTTTGGCGAGGAGCGGCTG
GTTCAGTGGGCCGATCGCTACGGCCACTGGCTCACCCTCAGGGGCGAGGACATCCGCCGAGCCGACGACTGGTTCGACCG
CTACGGCGCTGGAGCCGTGCTGTTTGGCCGCCTGGTCCCCGGCATCCGCAGCCTGCTGAGCCTCCCGGCAGGCATGAGCG
AAATGCCGCTCCCCACATTCCTGCTCTACAGCACCATCGGCTCGGGGCTGTGGGCCAGCGCCCTGGCCGGGGCGGGGTAT
CTGCTGGGCGAAAACTACGACCAGGTCGAGCAGTACCTCGGGCCGGCTTCGAAGGTAATCCTGGCGGTGGTGGTCCTGGC
GGTGGTGGTGTGGTTCGTGAGGCGGAAGAAGACGTTGGGTGTCAGGAAAGAGAGCTAA

Upstream 100 bases:

>100_bases
CACGTCATACGGGCAGTGTAGGGCGCGGCGCTCACCCCCTCTTGCAGCTGGCCAACTTTGGGGGGACGCCCAGCCCCTCC
TGAGCCTTTAGTCTGGGACA

Downstream 100 bases:

>100_bases
GAAAAGGGCCTGCCGCTTTCCTGGCGTCTCAAAACGCTCCCGCCTCGAACACCCGCCGGATCTCCCCCAGGTCGCGGCCC
AGGCTCAGCAGCACCAACAG

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MADWVQNLMDSLGYLGILLLMIVENLFPPIPSELIMPSAGFAASRGDLNLLLVIAVGTLGSVLGTLPLYYLGRAFGEERL
VQWADRYGHWLTLRGEDIRRADDWFDRYGAGAVLFGRLVPGIRSLLSLPAGMSEMPLPTFLLYSTIGSGLWASALAGAGY
LLGENYDQVEQYLGPASKVILAVVVLAVVVWFVRRKKTLGVRKES

Sequences:

>Translated_205_residues
MADWVQNLMDSLGYLGILLLMIVENLFPPIPSELIMPSAGFAASRGDLNLLLVIAVGTLGSVLGTLPLYYLGRAFGEERL
VQWADRYGHWLTLRGEDIRRADDWFDRYGAGAVLFGRLVPGIRSLLSLPAGMSEMPLPTFLLYSTIGSGLWASALAGAGY
LLGENYDQVEQYLGPASKVILAVVVLAVVVWFVRRKKTLGVRKES
>Mature_204_residues
ADWVQNLMDSLGYLGILLLMIVENLFPPIPSELIMPSAGFAASRGDLNLLLVIAVGTLGSVLGTLPLYYLGRAFGEERLV
QWADRYGHWLTLRGEDIRRADDWFDRYGAGAVLFGRLVPGIRSLLSLPAGMSEMPLPTFLLYSTIGSGLWASALAGAGYL
LGENYDQVEQYLGPASKVILAVVVLAVVVWFVRRKKTLGVRKES

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=138, Percent_Identity=26.0869565217391, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22447; Mature: 22315

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADWVQNLMDSLGYLGILLLMIVENLFPPIPSELIMPSAGFAASRGDLNLLLVIAVGTLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SVLGTLPLYYLGRAFGEERLVQWADRYGHWLTLRGEDIRRADDWFDRYGAGAVLFGRLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH
GIRSLLSLPAGMSEMPLPTFLLYSTIGSGLWASALAGAGYLLGENYDQVEQYLGPASKVI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHCCCHHHHHHHHCHHHHHH
LAVVVLAVVVWFVRRKKTLGVRKES
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADWVQNLMDSLGYLGILLLMIVENLFPPIPSELIMPSAGFAASRGDLNLLLVIAVGTLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SVLGTLPLYYLGRAFGEERLVQWADRYGHWLTLRGEDIRRADDWFDRYGAGAVLFGRLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH
GIRSLLSLPAGMSEMPLPTFLLYSTIGSGLWASALAGAGYLLGENYDQVEQYLGPASKVI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHCCCHHHHHHHHCHHHHHH
LAVVVLAVVVWFVRRKKTLGVRKES
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]