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The map label for this gene is ytfL [C]

Identifier: 94984200

GI number: 94984200

Start: 86421

End: 87728

Strand: Reverse

Name: ytfL [C]

Synonym: Dgeo_0092

Alternate gene names: 94984200

Gene position: 87728-86421 (Counterclockwise)

Preceding gene: 94984203

Following gene: 94984197

Centisome position: 3.56

GC content: 69.27

Gene sequence:

>1308_bases
GTGGGCAATCCCTGGCTGGAATTCGGCATCCTGATCCTGCTGCTGATCATCAATGGCTTCTTTTCCGGCTCGGAGCTGGG
CGTGGTGTCAGCCAAACGGTCGCGGCTGGAGGCAGCGGCAGCACGCGGGAGCCGGGGCGCAGCGGCGGCCGTGCGCCTGA
CCGAGCAGCCCGGCGCGTTTCTGGCAACGGTACAGATTGGCATCACCCTGATCGGCACCATCAGCGCGGTCTTCGCAGGG
GGCAGCCTCACGGGCTACCTCGAACCGTTGTTGCGGCCCCTGTTCGGAGCGGCGGCGGGGTCGGCCGCGAACGTTGCGGT
GGTCTTGTTGGTGACCTTCCTCTCGCTGGTGCTGGGCGAACTTGCCCCCAAGGGGATCGCGCTGCGCAACCCCGAGGCGC
TCGCCGCCCGGGTGGCCCCCTTTTTTACGGTGCTCTCGCGGGTGGCGCGGCCCCTGGTGTGGCTGCTCGACCGAACGGCC
AGCGGACTGCTGTGGCTGCTGGGCATGCGCGGAGCCGCGCAGGAGGTGGTCACCGAGGAGGACGTGCGGGCCGTCGTGCT
GCAAGCCGCCGAGAGTGGCAGCCTGGAAGAAACCGAAAGCGAGCGCATCGCCTCGGTGCTGCGCTTCAATGATCGTCGCG
TGCGCGACCTGATGACGCCCCGCACCGAGGCCGTGACCCTGGACCTGGACGCGCCGATCGAGAAGCTGGTGGAGACCGTG
CTGGAAAACGAACATGACCGGTATGCCGTACGGGACGGCCGCGGCGATGTGGTGGGGCAGGTGGCCGTGACCGACGTGCT
GCGCGCCCTGTACACCGGCGAACCCCTGGCGGATTTCGTACGGCCAGCCGTCTTCGTTCCGGAGGCTGCCTGGGCCGAGG
ACGCGCTGGCCCGCCTGGAACGCGAGGGACAGCAGCGGCTGGCTGTCGTGGTCGATGAGTACGGCGACTTCAGCGGCGTG
CTGTCGATCAGCGATCTGCTGGCGGAGCTGGCCGGCGTGGAGGATCAGGGCGACGAGGACCGGATCGTGCGCCGCGAGGA
CGGCTCCTTTCTGGTCGACGGCGGCATCGCCATGCACGAGCTGCGAGAGACGCTCCCCCTTCCGGCCCTGCCGCGCGAGG
AGTTCAGCACGCTGGCAGGCTACGTGCTGGACGTGCTGGGTGAGTTTCCCCAGGTGGGCGCCGTGGCCACGGTGGACGGC
TGGGACATCGAGGTGGTGGACGTGGACGGCCCGCGAGTCGACCGCCTGCTGATCCGCCCGCCGCGCAACGTTGGCAACGT
TGGAAGGGTGGCCGACGCGGAAGCGTAG

Upstream 100 bases:

>100_bases
CCTGGGCAGTATATCCGGTGTCTGGGGGGCACGGGTTGAGCGCGGCACATCAAGGAAAACTCAGGACGCTCCTCGCCCCA
GTGAACCCTACACTCTTTGC

Downstream 100 bases:

>100_bases
CCACCCTGCCCTGTAGGAATTCAAATGTTAGAGGGACTTGCTTCAGAGGTACTTAAGCACGTCCATCAACTCGTTGACGA
GTTCTTTCTCATCGCCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MGNPWLEFGILILLLIINGFFSGSELGVVSAKRSRLEAAAARGSRGAAAAVRLTEQPGAFLATVQIGITLIGTISAVFAG
GSLTGYLEPLLRPLFGAAAGSAANVAVVLLVTFLSLVLGELAPKGIALRNPEALAARVAPFFTVLSRVARPLVWLLDRTA
SGLLWLLGMRGAAQEVVTEEDVRAVVLQAAESGSLEETESERIASVLRFNDRRVRDLMTPRTEAVTLDLDAPIEKLVETV
LENEHDRYAVRDGRGDVVGQVAVTDVLRALYTGEPLADFVRPAVFVPEAAWAEDALARLEREGQQRLAVVVDEYGDFSGV
LSISDLLAELAGVEDQGDEDRIVRREDGSFLVDGGIAMHELRETLPLPALPREEFSTLAGYVLDVLGEFPQVGAVATVDG
WDIEVVDVDGPRVDRLLIRPPRNVGNVGRVADAEA

Sequences:

>Translated_435_residues
MGNPWLEFGILILLLIINGFFSGSELGVVSAKRSRLEAAAARGSRGAAAAVRLTEQPGAFLATVQIGITLIGTISAVFAG
GSLTGYLEPLLRPLFGAAAGSAANVAVVLLVTFLSLVLGELAPKGIALRNPEALAARVAPFFTVLSRVARPLVWLLDRTA
SGLLWLLGMRGAAQEVVTEEDVRAVVLQAAESGSLEETESERIASVLRFNDRRVRDLMTPRTEAVTLDLDAPIEKLVETV
LENEHDRYAVRDGRGDVVGQVAVTDVLRALYTGEPLADFVRPAVFVPEAAWAEDALARLEREGQQRLAVVVDEYGDFSGV
LSISDLLAELAGVEDQGDEDRIVRREDGSFLVDGGIAMHELRETLPLPALPREEFSTLAGYVLDVLGEFPQVGAVATVDG
WDIEVVDVDGPRVDRLLIRPPRNVGNVGRVADAEA
>Mature_434_residues
GNPWLEFGILILLLIINGFFSGSELGVVSAKRSRLEAAAARGSRGAAAAVRLTEQPGAFLATVQIGITLIGTISAVFAGG
SLTGYLEPLLRPLFGAAAGSAANVAVVLLVTFLSLVLGELAPKGIALRNPEALAARVAPFFTVLSRVARPLVWLLDRTAS
GLLWLLGMRGAAQEVVTEEDVRAVVLQAAESGSLEETESERIASVLRFNDRRVRDLMTPRTEAVTLDLDAPIEKLVETVL
ENEHDRYAVRDGRGDVVGQVAVTDVLRALYTGEPLADFVRPAVFVPEAAWAEDALARLEREGQQRLAVVVDEYGDFSGVL
SISDLLAELAGVEDQGDEDRIVRREDGSFLVDGGIAMHELRETLPLPALPREEFSTLAGYVLDVLGEFPQVGAVATVDGW
DIEVVDVDGPRVDRLLIRPPRNVGNVGRVADAEA

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=377, Percent_Identity=28.6472148541114, Blast_Score=184, Evalue=1e-46,
Organism=Escherichia coli, GI1790664, Length=421, Percent_Identity=27.0783847980998, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI145693175, Length=414, Percent_Identity=26.0869565217391, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI87082033, Length=282, Percent_Identity=28.3687943262411, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788119, Length=322, Percent_Identity=26.7080745341615, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786879, Length=273, Percent_Identity=22.7106227106227, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46543; Mature: 46412

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPWLEFGILILLLIINGFFSGSELGVVSAKRSRLEAAAARGSRGAAAAVRLTEQPGAF
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCE
LATVQIGITLIGTISAVFAGGSLTGYLEPLLRPLFGAAAGSAANVAVVLLVTFLSLVLGE
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAPKGIALRNPEALAARVAPFFTVLSRVARPLVWLLDRTASGLLWLLGMRGAAQEVVTEE
HCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DVRAVVLQAAESGSLEETESERIASVLRFNDRRVRDLMTPRTEAVTLDLDAPIEKLVETV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHH
LENEHDRYAVRDGRGDVVGQVAVTDVLRALYTGEPLADFVRPAVFVPEAAWAEDALARLE
HCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCHHHHHHHHHHHH
REGQQRLAVVVDEYGDFSGVLSISDLLAELAGVEDQGDEDRIVRREDGSFLVDGGIAMHE
HHCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCHHHHH
LRETLPLPALPREEFSTLAGYVLDVLGEFPQVGAVATVDGWDIEVVDVDGPRVDRLLIRP
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCEEEECC
PRNVGNVGRVADAEA
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
GNPWLEFGILILLLIINGFFSGSELGVVSAKRSRLEAAAARGSRGAAAAVRLTEQPGAF
CCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCE
LATVQIGITLIGTISAVFAGGSLTGYLEPLLRPLFGAAAGSAANVAVVLLVTFLSLVLGE
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAPKGIALRNPEALAARVAPFFTVLSRVARPLVWLLDRTASGLLWLLGMRGAAQEVVTEE
HCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DVRAVVLQAAESGSLEETESERIASVLRFNDRRVRDLMTPRTEAVTLDLDAPIEKLVETV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHH
LENEHDRYAVRDGRGDVVGQVAVTDVLRALYTGEPLADFVRPAVFVPEAAWAEDALARLE
HCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCHHHHHHHHHHHH
REGQQRLAVVVDEYGDFSGVLSISDLLAELAGVEDQGDEDRIVRREDGSFLVDGGIAMHE
HHCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCHHHHH
LRETLPLPALPREEFSTLAGYVLDVLGEFPQVGAVATVDGWDIEVVDVDGPRVDRLLIRP
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCEEEECC
PRNVGNVGRVADAEA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]