Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94984164

Identifier: 94984164

GI number: 94984164

Start: 54073

End: 54783

Strand: Reverse

Name: 94984164

Synonym: Dgeo_0056

Alternate gene names: NA

Gene position: 54783-54073 (Counterclockwise)

Preceding gene: 94984171

Following gene: 94984163

Centisome position: 2.22

GC content: 66.81

Gene sequence:

>711_bases
ATGACGAATGCCGTGTACACCCTGATCGTGCGCGCTCTGTCCGGCATCGTGTCCGAACGCGCTGCTGAAACCCTGCTGCG
CGCCGCCCTGCGCGAGCAGGGCCTCACCGCCGAGGGCGTGACCGCCGGCGAGATGCAACGGGTGCTGTCTGGCCCGCTGC
TGACCCGCCTCTCGGGGGTACTGCCCCCCGAGCGCGCCCGGGCCGAGCTGGGCAACCTGGCCGCCCAGCTCCAGAAGCAC
TACCCCAAAGCTCCCACCCTCTTCTCTTCCCCAGCCGCCACCTGGGATGAGACCACCAGCACCCACTGGGAAGACATCGA
CTTCAGCGCCGATGACTTTGAGTTTGATGACCCCGAATACACGGCCACGCCACCTGAGCGGCAGTACGCGCTGGGAACCG
CAGCCGGGCAGGAGGCCCTGATTCAGGATCTGGGACGGATACCGGGCGTGCAGGGCGTGATGGTCTGCCGTGCGAGCGGC
GAGGTGCTGCGCGAACGAGCCTTGTCGGGCAGCAGGAATCTCAGCAGTGTGATCGCCGCAACCGCCCTGCTGTTTCAAAA
ACGGGCGCTCAACCTGATGTCGGCTGATATGGGCGGACAGACGGTGTGCATGCGGCCAGTGGGTGCCTACTGTGTGGCGG
TGGTGGCAGGACCGCAGGTCAACATCGGGCGGTTGCTGGCCGAACTCCAGCAGGTGCGGGAGGCTGCGTGA

Upstream 100 bases:

>100_bases
GGCGGTCAGAGAGGGAGATGGCCATGTCGTGCAGTCTAGCCCGCCCGCGTTAGTCCGATTTCTGTAAGGGGGCACCCCCT
ATACTTTCGTCAGGTTTCTC

Downstream 100 bases:

>100_bases
ACAGGGCCTCTACCCTGTTTCTGCTCGCCACGTTGGCGGTAGGAACAGCGGGGGCGCAGGACCTCAGCGCCTACCGCACC
CTCGCCGGAAGCCTGGAGGC

Product: roadblock/LC7 domain-contain protein

Products: NA

Alternate protein names: Roadblock/LC7 Domain-Containing Protein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKH
YPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASG
EVLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA

Sequences:

>Translated_236_residues
MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKH
YPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASG
EVLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA
>Mature_235_residues
TNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKHY
PKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGE
VLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25224; Mature: 25093

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHCC
LPPERARAELGNLAAQLQKHYPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGEVLRERALSGSRNLSSVIAA
CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHH
TALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA
HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHCC
LPPERARAELGNLAAQLQKHYPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGEVLRERALSGSRNLSSVIAA
CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHH
TALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA
HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA