| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94984162
Identifier: 94984162
GI number: 94984162
Start: 50524
End: 52458
Strand: Reverse
Name: 94984162
Synonym: Dgeo_0054
Alternate gene names: NA
Gene position: 52458-50524 (Counterclockwise)
Preceding gene: 94984163
Following gene: 94984161
Centisome position: 2.13
GC content: 70.85
Gene sequence:
>1935_bases GTGACCGCCGCTCCTAACCCTTCTGAACCCCTCCACCGTCTCCCGGTGCGGCTGCTGGGCGATCTCATCTCGCCACGCGC GCTGGAGCGCATCTTGCAAGACGCAGCGCAGGCCCGGGGCCGGACGCCCGAGACCCTCGACGCCCCCACGCTCGAAGACA TCCTCAAGCGCGAGGTCTTTAAGCGGCTGCAACTGAGCGTGCCCGCTGCGCTCGCCAAGCGCCGGGTGTCGGACGTGATC AAAGAGGTGCTGGCCGCCACTCCAGCCCCGCAAACCCCTCGCAGCGGGGAACAATCACTGGAGGTCCTGGAGGAGGGCGC GCGGCGCTTCACCCTCTATTTTGATTGGCCGGAGACGCAGCGGCTGCGCGGCGTGCTGGGGGTGGCCCGGCAGCAACAGC AGGCCGGACAAGACATCACGGCGCTGGTGCGCGAAGGCCAGGACCTGATCAACCTGATGGAGCGCCGTCTGCAAGAAGGG TTGGTCACGCAGGCACAAGACCTGGCGGAGCTGCAGGCGGCTTACCAGCGGGTCCAGAGTATGGGCGGTAAGGATGTCCG CCGCCTGGAAGGCCTGATCGCGCAGATCAAGGAGGCGCAGAGCCAGGGCGTGCTGCTGCCCGCCGAAGTGGAGCGGGCGC GCACCATCACGTTCACCCTGCGCAAGCTGCTGGAGTCGTCGGTGGTGCAGCCGCTTGAGTCCGGCAAAGCCCCGCCCCTT CTCGATCCCGAGGCGCAGGCACGGGTGCTGGCGCTCGAACAAGAGCACGTTGCTCGGCAACTGGCCGACCTCGCCCGCGA GTTTGGGCCGTTGGTGCGCGCCCGCCCAGAGCTGGAAACGCGCCTGCAGATCATCCGCAGTCAGCATGCCAGCGGTACGC TCAAGGCCGAGACGGTCGATCTCTGGCGCGCTGAGCTGGAAGCCACCCGCGACCTGGTCCTGGCCTCCCAGCGGGAAGAA CTTGCGGGCCTGGAAGCCCGGCTGGCAGCGCTGCCGGAAAGCCCCGAACTGGCCGAGGCCCGCACCGCACTGAACGTGGC TCGGCTCACACTGGCGGGAGGCGGCCTCGCCACCGATGAGCTGCGCGACCTGGGGGGTACCCTGGCCGCGCTGGAGGCGG CCCCCGCGCTGGCTGCGCGCCTGCTCGCCGGTCAGCGCGAACTGGCCGAAGTGGAGCGGGCCGCTCGGGACGTGCCCGGA GCCAGCGCCGAACTCGCCCCGCAGCTCGCCGCCGCCCGCGAGGCGCTGGCCCGGGGTGAGGATGTGGAGATCGACGCGCT GTGGGCTGCCTTGGAGCGCCGCATGGGTCAGGCGGCCCAGCAGCGCCAAGACTTCGACGCCCGCGCCGACTTTGTCATCC GCGAATACGACACCGTGCGGCATCTGGCGGGCGAAACCATTCAGCGACTGGGGCGCCTGGCCGATACCCTGCGCGCGCAG CGCCGCCTGGGGCCGATGTCAGCGGACGCCCGCGAGCGGTACGCCCAGACCCTCGCGGACGCTGAGGCCCTGCTGACAGA GGCTCGCGCCGAGTATCAGGCGGCCCAGGAGGTGACGGCCAGCTTCGGCGCCGAGGCCCTCAGCGGCCTGCTTGATGTCT TTGATTTCGGGGGGGACCCGGCGGGCGATCTGTTTGGCGCCGCGGCCCCCACTGAACAGATGCCCGATGCCGCCGGTCTC CCCGACGACACCTGGCTGATTCGGGGGCGCACGGTGGTGGCAGGCCGCACGGACCCGGCGGTGTCCGGCATCGCCGCCCT GCTCGAACAGGCCGCGCTGCTGGACGTGCGGGTCCTGCGCTTTGAAGATCCTCAGGGGGCTTGGGCGGCACGGCAAGACG GGGGAGGCGGCTGGCGGCTGGCCCGCGGCCCCAACGCCGCCTCCCTAGAAGACCGAGTGGGCGACTGGCTGGCGAGCGGC GAGCTCCGGCGTTAG
Upstream 100 bases:
>100_bases CTGCTGGGCCGCAGCAGCGCCGGGAGCATGACCGCGCAACCCAGTCTGGACTGGGACGAGGAACCCACATGATTCAGCCC CCTGATGCCGGAGCACGCGC
Downstream 100 bases:
>100_bases CCTGCGGAGCGTGACCGCTCCTGATCTGCCCCTCCACGCCGGTGAGACACGCCTGCTCCACGGTCCAGACGAGCAGCGCG CCTTGGGGGCCGCCCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MTAAPNPSEPLHRLPVRLLGDLISPRALERILQDAAQARGRTPETLDAPTLEDILKREVFKRLQLSVPAALAKRRVSDVI KEVLAATPAPQTPRSGEQSLEVLEEGARRFTLYFDWPETQRLRGVLGVARQQQQAGQDITALVREGQDLINLMERRLQEG LVTQAQDLAELQAAYQRVQSMGGKDVRRLEGLIAQIKEAQSQGVLLPAEVERARTITFTLRKLLESSVVQPLESGKAPPL LDPEAQARVLALEQEHVARQLADLAREFGPLVRARPELETRLQIIRSQHASGTLKAETVDLWRAELEATRDLVLASQREE LAGLEARLAALPESPELAEARTALNVARLTLAGGGLATDELRDLGGTLAALEAAPALAARLLAGQRELAEVERAARDVPG ASAELAPQLAAAREALARGEDVEIDALWAALERRMGQAAQQRQDFDARADFVIREYDTVRHLAGETIQRLGRLADTLRAQ RRLGPMSADARERYAQTLADAEALLTEARAEYQAAQEVTASFGAEALSGLLDVFDFGGDPAGDLFGAAAPTEQMPDAAGL PDDTWLIRGRTVVAGRTDPAVSGIAALLEQAALLDVRVLRFEDPQGAWAARQDGGGGWRLARGPNAASLEDRVGDWLASG ELRR
Sequences:
>Translated_644_residues MTAAPNPSEPLHRLPVRLLGDLISPRALERILQDAAQARGRTPETLDAPTLEDILKREVFKRLQLSVPAALAKRRVSDVI KEVLAATPAPQTPRSGEQSLEVLEEGARRFTLYFDWPETQRLRGVLGVARQQQQAGQDITALVREGQDLINLMERRLQEG LVTQAQDLAELQAAYQRVQSMGGKDVRRLEGLIAQIKEAQSQGVLLPAEVERARTITFTLRKLLESSVVQPLESGKAPPL LDPEAQARVLALEQEHVARQLADLAREFGPLVRARPELETRLQIIRSQHASGTLKAETVDLWRAELEATRDLVLASQREE LAGLEARLAALPESPELAEARTALNVARLTLAGGGLATDELRDLGGTLAALEAAPALAARLLAGQRELAEVERAARDVPG ASAELAPQLAAAREALARGEDVEIDALWAALERRMGQAAQQRQDFDARADFVIREYDTVRHLAGETIQRLGRLADTLRAQ RRLGPMSADARERYAQTLADAEALLTEARAEYQAAQEVTASFGAEALSGLLDVFDFGGDPAGDLFGAAAPTEQMPDAAGL PDDTWLIRGRTVVAGRTDPAVSGIAALLEQAALLDVRVLRFEDPQGAWAARQDGGGGWRLARGPNAASLEDRVGDWLASG ELRR >Mature_643_residues TAAPNPSEPLHRLPVRLLGDLISPRALERILQDAAQARGRTPETLDAPTLEDILKREVFKRLQLSVPAALAKRRVSDVIK EVLAATPAPQTPRSGEQSLEVLEEGARRFTLYFDWPETQRLRGVLGVARQQQQAGQDITALVREGQDLINLMERRLQEGL VTQAQDLAELQAAYQRVQSMGGKDVRRLEGLIAQIKEAQSQGVLLPAEVERARTITFTLRKLLESSVVQPLESGKAPPLL DPEAQARVLALEQEHVARQLADLAREFGPLVRARPELETRLQIIRSQHASGTLKAETVDLWRAELEATRDLVLASQREEL AGLEARLAALPESPELAEARTALNVARLTLAGGGLATDELRDLGGTLAALEAAPALAARLLAGQRELAEVERAARDVPGA SAELAPQLAAAREALARGEDVEIDALWAALERRMGQAAQQRQDFDARADFVIREYDTVRHLAGETIQRLGRLADTLRAQR RLGPMSADARERYAQTLADAEALLTEARAEYQAAQEVTASFGAEALSGLLDVFDFGGDPAGDLFGAAAPTEQMPDAAGLP DDTWLIRGRTVVAGRTDPAVSGIAALLEQAALLDVRVLRFEDPQGAWAARQDGGGGWRLARGPNAASLEDRVGDWLASGE LRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69889; Mature: 69758
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPNPSEPLHRLPVRLLGDLISPRALERILQDAAQARGRTPETLDAPTLEDILKREVF CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH KRLQLSVPAALAKRRVSDVIKEVLAATPAPQTPRSGEQSLEVLEEGARRFTLYFDWPETQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH RLRGVLGVARQQQQAGQDITALVREGQDLINLMERRLQEGLVTQAQDLAELQAAYQRVQS HHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGGKDVRRLEGLIAQIKEAQSQGVLLPAEVERARTITFTLRKLLESSVVQPLESGKAPPL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LDPEAQARVLALEQEHVARQLADLAREFGPLVRARPELETRLQIIRSQHASGTLKAETVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH LWRAELEATRDLVLASQREELAGLEARLAALPESPELAEARTALNVARLTLAGGGLATDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LRDLGGTLAALEAAPALAARLLAGQRELAEVERAARDVPGASAELAPQLAAAREALARGE HHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC DVEIDALWAALERRMGQAAQQRQDFDARADFVIREYDTVRHLAGETIQRLGRLADTLRAQ CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLGPMSADARERYAQTLADAEALLTEARAEYQAAQEVTASFGAEALSGLLDVFDFGGDP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGDLFGAAAPTEQMPDAAGLPDDTWLIRGRTVVAGRTDPAVSGIAALLEQAALLDVRVLR CHHHCCCCCCHHHCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHEE FEDPQGAWAARQDGGGGWRLARGPNAASLEDRVGDWLASGELRR EECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TAAPNPSEPLHRLPVRLLGDLISPRALERILQDAAQARGRTPETLDAPTLEDILKREVF CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH KRLQLSVPAALAKRRVSDVIKEVLAATPAPQTPRSGEQSLEVLEEGARRFTLYFDWPETQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH RLRGVLGVARQQQQAGQDITALVREGQDLINLMERRLQEGLVTQAQDLAELQAAYQRVQS HHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGGKDVRRLEGLIAQIKEAQSQGVLLPAEVERARTITFTLRKLLESSVVQPLESGKAPPL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LDPEAQARVLALEQEHVARQLADLAREFGPLVRARPELETRLQIIRSQHASGTLKAETVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH LWRAELEATRDLVLASQREELAGLEARLAALPESPELAEARTALNVARLTLAGGGLATDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LRDLGGTLAALEAAPALAARLLAGQRELAEVERAARDVPGASAELAPQLAAAREALARGE HHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC DVEIDALWAALERRMGQAAQQRQDFDARADFVIREYDTVRHLAGETIQRLGRLADTLRAQ CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLGPMSADARERYAQTLADAEALLTEARAEYQAAQEVTASFGAEALSGLLDVFDFGGDP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGDLFGAAAPTEQMPDAAGLPDDTWLIRGRTVVAGRTDPAVSGIAALLEQAALLDVRVLR CHHHCCCCCCHHHCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHEE FEDPQGAWAARQDGGGGWRLARGPNAASLEDRVGDWLASGELRR EECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA