| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yjeE [C]
Identifier: 94984161
GI number: 94984161
Start: 50064
End: 50513
Strand: Reverse
Name: yjeE [C]
Synonym: Dgeo_0053
Alternate gene names: 94984161
Gene position: 50513-50064 (Counterclockwise)
Preceding gene: 94984162
Following gene: 94984160
Centisome position: 2.05
GC content: 69.78
Gene sequence:
>450_bases GTGACCGCTCCTGATCTGCCCCTCCACGCCGGTGAGACACGCCTGCTCCACGGTCCAGACGAGCAGCGCGCCTTGGGGGC CGCCCTTGCCCAGACCCTGCCACCGGGCACCGTGCTGTTCTTAGAAGGCGAGCTGGGCGCTGGCAAAACCACGTTGACGA GCGGCTTGGTGACCGCGCTCGGCTTCGCAGACGCCGTCACCAGCCCGACCTACGCGCTCATGCACGTCTATCCTGCGGCG GCGGGCCGCGTTCTGCATGTGGACGCCTACCGCGTGCGCGACGTGGCGGAGCTGTATGAGATGGACCTGGAGGCGCTGGT CGCCGGGAGCCGCCTGACCGTGATCGAGTGGGGCGAAGGCCTCTACGCCGACTATCCCGACGCCCCGATCCTGCTGCTGG AGCATGTGCCGGGCGACCCTGAGGTGCGGCGGATCACCCGGCGCCGCTGA
Upstream 100 bases:
>100_bases GGCGGCTGGCGGCTGGCCCGCGGCCCCAACGCCGCCTCCCTAGAAGACCGAGTGGGCGACTGGCTGGCGAGCGGCGAGCT CCGGCGTTAGCCTGCGGAGC
Downstream 100 bases:
>100_bases TGCGCAGTTGTCTTGAGCGGGGCGTTTACCCCCTGTCCTGACCCGCTTGCTGGGCCAGAATGCAGCCATGTGGACGCTGG TGGTGAATTGCGGGTCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTAPDLPLHAGETRLLHGPDEQRALGAALAQTLPPGTVLFLEGELGAGKTTLTSGLVTALGFADAVTSPTYALMHVYPAA AGRVLHVDAYRVRDVAELYEMDLEALVAGSRLTVIEWGEGLYADYPDAPILLLEHVPGDPEVRRITRRR
Sequences:
>Translated_149_residues MTAPDLPLHAGETRLLHGPDEQRALGAALAQTLPPGTVLFLEGELGAGKTTLTSGLVTALGFADAVTSPTYALMHVYPAA AGRVLHVDAYRVRDVAELYEMDLEALVAGSRLTVIEWGEGLYADYPDAPILLLEHVPGDPEVRRITRRR >Mature_148_residues TAPDLPLHAGETRLLHGPDEQRALGAALAQTLPPGTVLFLEGELGAGKTTLTSGLVTALGFADAVTSPTYALMHVYPAAA GRVLHVDAYRVRDVAELYEMDLEALVAGSRLTVIEWGEGLYADYPDAPILLLEHVPGDPEVRRITRRR
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=123, Percent_Identity=39.0243902439024, Blast_Score=74, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16011; Mature: 15879
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPDLPLHAGETRLLHGPDEQRALGAALAQTLPPGTVLFLEGELGAGKTTLTSGLVTAL CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH GFADAVTSPTYALMHVYPAAAGRVLHVDAYRVRDVAELYEMDLEALVAGSRLTVIEWGEG HHHHHHCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC LYADYPDAPILLLEHVPGDPEVRRITRRR CCCCCCCCCEEEEECCCCCHHHHHHHCCC >Mature Secondary Structure TAPDLPLHAGETRLLHGPDEQRALGAALAQTLPPGTVLFLEGELGAGKTTLTSGLVTAL CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH GFADAVTSPTYALMHVYPAAAGRVLHVDAYRVRDVAELYEMDLEALVAGSRLTVIEWGEG HHHHHHCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC LYADYPDAPILLLEHVPGDPEVRRITRRR CCCCCCCCCEEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]