| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ackA
Identifier: 94984160
GI number: 94984160
Start: 48809
End: 49996
Strand: Reverse
Name: ackA
Synonym: Dgeo_0052
Alternate gene names: 94984160
Gene position: 49996-48809 (Counterclockwise)
Preceding gene: 94984161
Following gene: 94984159
Centisome position: 2.03
GC content: 69.44
Gene sequence:
>1188_bases ATGTGGACGCTGGTGGTGAATTGCGGGTCGAGCAGTCTCAAATTCGCGCTGCTGAATCCCGCCACGGGAGAGACGCCGCT GACCGGCCTCGCGGAGCGGCTGGGGTCCGACCTGGCCGCGGTGCGGGTCGACCGGGGGGAGGAACGGGGGACCGTCCCGC TGCCACAGGGCAGCTACTCGGAAGCCTTTGGTGTGCTGCTGGCCGAACTGGACGCGCTGGGACTGCGGCAGGAGGTCCGG GCGGTCGGACACCGGGTTGTTCACGGCGGTGACCGCTTCAACGCGCCGGTACGGATCACGCCGGAGGTACTGGAGGTGAT CCGTACCTGTATTCCCCTTGCGCCGCTGCACAACCCGGCGAACCTGGCGGGGATCGAGGCGGCGCTGGCCGCTTTTCCGG AGCTGCCGCAGGTCGCGGTCTTCGACACCGCCTTTCACCAGAGCATGCCCCCCGTCGCCTACCGCTACGCAGTCCCGACT GTCTGGTATACCTGCTACGGCGTGCGGCGCTACGGCTTTCATGGCATCAGCCATGCCTATGTGGCCGAGGAGGCCGCGCG GCTCCTAGCGCGCGACCTCACAGACCTGAGCCTGGTGACGGCACACCTGGGCAATGGCTGCAGCGTGACCGCCGTGCAAG GCGGGCGCAGCCTGGACACCAGCATGGGCCTCACGCCGCTCGAAGGGTTGGTGATGGGCACCCGCAGCGGCGACGTGGAC CCTGGCCTGCCCGACTACCTCGCGCGAGAAGCGGGCCTGACCCTCGCCGAAATCACGGCGGCCCTCAACCGGGAAAGCGG GCTGCTGGGCCTGTCGGGTCTCACGAACGACATGCGCGAGCTGGAGGCAGCGGCGGCGGGGGGCAACACCAATGCCCAGC TGGCGCTGGAGATCTTTGTATACCGCCTTGCCAAGACGATCGCGGGCATGGCGACTGTGCTCGGGCGGCTGGACGCGCTG GTCTTTACGGGCGGCATTGGGGAGAACAGCGCCACGGTGCGGGCCGCCACCCTCGCCCGGCTGGGGCTGCTGGGCTTCCA GCTGGACGCGGCGGCCAACGCACAGGCGGTGCGTGGCCAGGGGGGCGTCATCACCTCCGGCGGCGTCCCCGCACTGGTCG TGAACACGAACGAGGAACGCATGATCGCCCGTGAGACCGCGCGGGCGGTGAAAGGAGCGCCGGCATGA
Upstream 100 bases:
>100_bases CCTGAGGTGCGGCGGATCACCCGGCGCCGCTGATGCGCAGTTGTCTTGAGCGGGGCGTTTACCCCCTGTCCTGACCCGCT TGCTGGGCCAGAATGCAGCC
Downstream 100 bases:
>100_bases AAACCCTCTTCATCGCCCCCACCCGCAACGGCGTGGGCCTGACCAGCACGGCGCTGGGACTGCTGCGCGCGCTGGAGCGC CAAGGCCTCAAAGTCGCCTT
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MWTLVVNCGSSSLKFALLNPATGETPLTGLAERLGSDLAAVRVDRGEERGTVPLPQGSYSEAFGVLLAELDALGLRQEVR AVGHRVVHGGDRFNAPVRITPEVLEVIRTCIPLAPLHNPANLAGIEAALAAFPELPQVAVFDTAFHQSMPPVAYRYAVPT VWYTCYGVRRYGFHGISHAYVAEEAARLLARDLTDLSLVTAHLGNGCSVTAVQGGRSLDTSMGLTPLEGLVMGTRSGDVD PGLPDYLAREAGLTLAEITAALNRESGLLGLSGLTNDMRELEAAAAGGNTNAQLALEIFVYRLAKTIAGMATVLGRLDAL VFTGGIGENSATVRAATLARLGLLGFQLDAAANAQAVRGQGGVITSGGVPALVVNTNEERMIARETARAVKGAPA
Sequences:
>Translated_395_residues MWTLVVNCGSSSLKFALLNPATGETPLTGLAERLGSDLAAVRVDRGEERGTVPLPQGSYSEAFGVLLAELDALGLRQEVR AVGHRVVHGGDRFNAPVRITPEVLEVIRTCIPLAPLHNPANLAGIEAALAAFPELPQVAVFDTAFHQSMPPVAYRYAVPT VWYTCYGVRRYGFHGISHAYVAEEAARLLARDLTDLSLVTAHLGNGCSVTAVQGGRSLDTSMGLTPLEGLVMGTRSGDVD PGLPDYLAREAGLTLAEITAALNRESGLLGLSGLTNDMRELEAAAAGGNTNAQLALEIFVYRLAKTIAGMATVLGRLDAL VFTGGIGENSATVRAATLARLGLLGFQLDAAANAQAVRGQGGVITSGGVPALVVNTNEERMIARETARAVKGAPA >Mature_395_residues MWTLVVNCGSSSLKFALLNPATGETPLTGLAERLGSDLAAVRVDRGEERGTVPLPQGSYSEAFGVLLAELDALGLRQEVR AVGHRVVHGGDRFNAPVRITPEVLEVIRTCIPLAPLHNPANLAGIEAALAAFPELPQVAVFDTAFHQSMPPVAYRYAVPT VWYTCYGVRRYGFHGISHAYVAEEAARLLARDLTDLSLVTAHLGNGCSVTAVQGGRSLDTSMGLTPLEGLVMGTRSGDVD PGLPDYLAREAGLTLAEITAALNRESGLLGLSGLTNDMRELEAAAAGGNTNAQLALEIFVYRLAKTIAGMATVLGRLDAL VFTGGIGENSATVRAATLARLGLLGFQLDAAANAQAVRGQGGVITSGGVPALVVNTNEERMIARETARAVKGAPA
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI145693184, Length=395, Percent_Identity=47.5949367088608, Blast_Score=352, Evalue=3e-98, Organism=Escherichia coli, GI1788633, Length=392, Percent_Identity=46.6836734693878, Blast_Score=344, Evalue=6e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACKA_DEIGD (Q1J2C9)
Other databases:
- EMBL: CP000359 - RefSeq: YP_603524.1 - ProteinModelPortal: Q1J2C9 - SMR: Q1J2C9 - STRING: Q1J2C9 - GeneID: 4058493 - GenomeReviews: CP000359_GR - KEGG: dge:Dgeo_0052 - NMPDR: fig|68909.1.peg.1505 - eggNOG: COG0282 - HOGENOM: HBG285863 - OMA: HGGDLFT - PhylomeDB: Q1J2C9 - ProtClustDB: PRK00180 - BioCyc: DGEO319795:DGEO_0052-MONOMER - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 41229; Mature: 41229
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTLVVNCGSSSLKFALLNPATGETPLTGLAERLGSDLAAVRVDRGEERGTVPLPQGSYS CEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHH EAFGVLLAELDALGLRQEVRAVGHRVVHGGDRFNAPVRITPEVLEVIRTCIPLAPLHNPA HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECHHHHHHHHHHCCCCCCCCCC NLAGIEAALAAFPELPQVAVFDTAFHQSMPPVAYRYAVPTVWYTCYGVRRYGFHGISHAY HHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHH VAEEAARLLARDLTDLSLVTAHLGNGCSVTAVQGGRSLDTSMGLTPLEGLVMGTRSGDVD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCC PGLPDYLAREAGLTLAEITAALNRESGLLGLSGLTNDMRELEAAAAGGNTNAQLALEIFV CCCHHHHHHHHCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YRLAKTIAGMATVLGRLDALVFTGGIGENSATVRAATLARLGLLGFQLDAAANAQAVRGQ HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCC GGVITSGGVPALVVNTNEERMIARETARAVKGAPA CCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWTLVVNCGSSSLKFALLNPATGETPLTGLAERLGSDLAAVRVDRGEERGTVPLPQGSYS CEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHH EAFGVLLAELDALGLRQEVRAVGHRVVHGGDRFNAPVRITPEVLEVIRTCIPLAPLHNPA HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECHHHHHHHHHHCCCCCCCCCC NLAGIEAALAAFPELPQVAVFDTAFHQSMPPVAYRYAVPTVWYTCYGVRRYGFHGISHAY HHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHH VAEEAARLLARDLTDLSLVTAHLGNGCSVTAVQGGRSLDTSMGLTPLEGLVMGTRSGDVD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCC PGLPDYLAREAGLTLAEITAALNRESGLLGLSGLTNDMRELEAAAAGGNTNAQLALEIFV CCCHHHHHHHHCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YRLAKTIAGMATVLGRLDALVFTGGIGENSATVRAATLARLGLLGFQLDAAANAQAVRGQ HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCC GGVITSGGVPALVVNTNEERMIARETARAVKGAPA CCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA