| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984153
Identifier: 94984153
GI number: 94984153
Start: 40596
End: 41294
Strand: Reverse
Name: 94984153
Synonym: Dgeo_0045
Alternate gene names: NA
Gene position: 41294-40596 (Counterclockwise)
Preceding gene: 94984155
Following gene: 94984150
Centisome position: 1.67
GC content: 61.66
Gene sequence:
>699_bases GTGACCCGGACCCGCTCTCAGCCTGTCAGCACGCCTTCCAAACGCGAATGGTTCAGTGAACTGATCGGGCGCACCCGCTT CGTGGTGCTGATCGCCGTGATTGCCGTGCTGCTGGTGGCCTTCAGCCTGTTCCTCCAGGGCACGGTCTTGGCGCTGCAAA CCGTCTACGAAACCTGGCGGGACATGCTGCAGCCGGGACCTGATGGAACGGTCACAGCTCTGTCGGTCGAGTTTTTGGAA GTGGTCAGCACCATGCTCAAGGCCGTGGTGTTCTACATCATCGGGGTGGGCCTGTATTCCCTCTTTATCCGGCCGCTGAA CCTCACCTCGTCGCTCGGAGTAGAGAGCCTCTCTGACCTGGAGCAAAAGGTAGTGTCCATGATTGTCGTGATTCTGGGTG TGACCTTTCTGGAACACTTCATCCGCTGGAACAATCCCCAGGAGACGCTGTACTTTGCTGGGGCTTTTGCACTGGCCGGC GGAGCGCTCGTGTTCTTCCAGCGCGTTCACCGGGGTCAAGGCAGTGACCTTCAGCATCCCGAGGCCAAGCTGCGCGCCCG GCGCGAACTGTTTGAGAACGACACCGAGCAGCGCGAGATCCGAGAGGAGGACGTGCAGCGCGCTGCCCAGGCCACCGAGG CCAAGGCCGAAGGCAGGGTCAACGCGGACAGCGGCGACGGAGCACTCAAGCGTCCGTGA
Upstream 100 bases:
>100_bases CAGCTTCACAGGAAGCTGCAGGGCGCGCCGACCGGTCCCACAGCAAGAAACCATTGGCATGACCACATCTTCCCAGCAGC TGGGGCGTCATGATGGCTGA
Downstream 100 bases:
>100_bases TGGCGAGGAGCCGCCTTTCCACGCTCTGCACGCTAGCCCGTGCTGCCTGCGCGTCCGGCATCCCGGCGGCGTGGACGTAG ATCACCCGCCGGTCAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTRTRSQPVSTPSKREWFSELIGRTRFVVLIAVIAVLLVAFSLFLQGTVLALQTVYETWRDMLQPGPDGTVTALSVEFLE VVSTMLKAVVFYIIGVGLYSLFIRPLNLTSSLGVESLSDLEQKVVSMIVVILGVTFLEHFIRWNNPQETLYFAGAFALAG GALVFFQRVHRGQGSDLQHPEAKLRARRELFENDTEQREIREEDVQRAAQATEAKAEGRVNADSGDGALKRP
Sequences:
>Translated_232_residues MTRTRSQPVSTPSKREWFSELIGRTRFVVLIAVIAVLLVAFSLFLQGTVLALQTVYETWRDMLQPGPDGTVTALSVEFLE VVSTMLKAVVFYIIGVGLYSLFIRPLNLTSSLGVESLSDLEQKVVSMIVVILGVTFLEHFIRWNNPQETLYFAGAFALAG GALVFFQRVHRGQGSDLQHPEAKLRARRELFENDTEQREIREEDVQRAAQATEAKAEGRVNADSGDGALKRP >Mature_231_residues TRTRSQPVSTPSKREWFSELIGRTRFVVLIAVIAVLLVAFSLFLQGTVLALQTVYETWRDMLQPGPDGTVTALSVEFLEV VSTMLKAVVFYIIGVGLYSLFIRPLNLTSSLGVESLSDLEQKVVSMIVVILGVTFLEHFIRWNNPQETLYFAGAFALAGG ALVFFQRVHRGQGSDLQHPEAKLRARRELFENDTEQREIREEDVQRAAQATEAKAEGRVNADSGDGALKRP
Specific function: Unknown
COG id: COG2862
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25872; Mature: 25741
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTRSQPVSTPSKREWFSELIGRTRFVVLIAVIAVLLVAFSLFLQGTVLALQTVYETWR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLQPGPDGTVTALSVEFLEVVSTMLKAVVFYIIGVGLYSLFIRPLNLTSSLGVESLSDL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHH EQKVVSMIVVILGVTFLEHFIRWNNPQETLYFAGAFALAGGALVFFQRVHRGQGSDLQHP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EAKLRARRELFENDTEQREIREEDVQRAAQATEAKAEGRVNADSGDGALKRP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TRTRSQPVSTPSKREWFSELIGRTRFVVLIAVIAVLLVAFSLFLQGTVLALQTVYETWR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLQPGPDGTVTALSVEFLEVVSTMLKAVVFYIIGVGLYSLFIRPLNLTSSLGVESLSDL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHH EQKVVSMIVVILGVTFLEHFIRWNNPQETLYFAGAFALAGGALVFFQRVHRGQGSDLQHP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EAKLRARRELFENDTEQREIREEDVQRAAQATEAKAEGRVNADSGDGALKRP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA