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The map label for this gene is ddrC [H]

Identifier: 94984155

GI number: 94984155

Start: 42215

End: 42886

Strand: Reverse

Name: ddrC [H]

Synonym: Dgeo_0047

Alternate gene names: 94984155

Gene position: 42886-42215 (Counterclockwise)

Preceding gene: 94984159

Following gene: 94984153

Centisome position: 1.74

GC content: 68.6

Gene sequence:

>672_bases
GTGCAGCCTCAGGATCGCGGCATTGCCGTGCACCCCCTGCTCGCTGATGGCGCGGGCGGTGGCGGTATCCAGATAGGCCA
GGCGCAGCAGTTCATCGGTCCGCAGGCCGTCGCGGGTCTGCCGCACAGCGCGCTCGCGCCGAATGGTGGCGGAGTCGGTG
CCCAGCACGCTGCGGTTGCTGATGCTGCCCAGTTGTCCGTACACCGGCCCCTCGCCGCCGTGCCGCGCAACGGTACTTAT
CAGCTCGCGGCGGGCGCCGGTGCTTTCCAAACGGGCGGCCAGCCAGCGCCGCGCTTCCGGATCCGCGTTGCGTTCTGCGA
TCTGTGCGGCCAGGCGCACATCACCGGTCAGCGCACGCGCCAGCAGCGTCTGCGCTCGCCGGCGCCAGCGCCGGGCTTCG
GGCGTGTCGACCACAAAGGCGAGCCGCGCGAACTCATCCGGAGAGAGCGTCGCTTCTGGCCCCACGCCAAAGTCGCGCTC
GGGGCTGCGCAGGTCGTACGCTGCGGCAAAGGCGGCCCAGTCCTCCGGCAGGGGCACGCCCAGAGTCTTCAGGGCAGTCG
CGGCATGCAGCAAACCATCCGCGCTGGCGGGCAGCCGCTGCGTGCCGAATTCAAGCGTGATGGGCGCGGTCTTCATGCGT
ATATCTTAGCGTATTTTACGCTAAAAACATAA

Upstream 100 bases:

>100_bases
CCGAGCCGCTCACCGCAGCGGATGGATCCTTGCGTCTGATCGGTCCTTAGCTCGCCTGCGAGCCACCCCACAGCGAACGC
TCGCGCCGCGCTACCTCCTC

Downstream 100 bases:

>100_bases
TCAGTCACTTCTGTCGCTCCGCTCCTGGCCGCAGAAAGGGCGAGCCTCCAGCTTGACGTGCCCTCAATGCCCCAGCAGGT
GCTGCACCGTCACGAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQPQDRGIAVHPLLADGAGGGGIQIGQAQQFIGPQAVAGLPHSALAPNGGGVGAQHAAVADAAQLSVHRPLAAVPRNGTY
QLAAGAGAFQTGGQPAPRFRIRVAFCDLCGQAHITGQRTRQQRLRSPAPAPGFGRVDHKGEPRELIRRERRFWPHAKVAL
GAAQVVRCGKGGPVLRQGHAQSLQGSRGMQQTIRAGGQPLRAEFKRDGRGLHAYILAYFTLKT

Sequences:

>Translated_223_residues
MQPQDRGIAVHPLLADGAGGGGIQIGQAQQFIGPQAVAGLPHSALAPNGGGVGAQHAAVADAAQLSVHRPLAAVPRNGTY
QLAAGAGAFQTGGQPAPRFRIRVAFCDLCGQAHITGQRTRQQRLRSPAPAPGFGRVDHKGEPRELIRRERRFWPHAKVAL
GAAQVVRCGKGGPVLRQGHAQSLQGSRGMQQTIRAGGQPLRAEFKRDGRGLHAYILAYFTLKT
>Mature_223_residues
MQPQDRGIAVHPLLADGAGGGGIQIGQAQQFIGPQAVAGLPHSALAPNGGGVGAQHAAVADAAQLSVHRPLAAVPRNGTY
QLAAGAGAFQTGGQPAPRFRIRVAFCDLCGQAHITGQRTRQQRLRSPAPAPGFGRVDHKGEPRELIRRERRFWPHAKVAL
GAAQVVRCGKGGPVLRQGHAQSLQGSRGMQQTIRAGGQPLRAEFKRDGRGLHAYILAYFTLKT

Specific function: Appears to contribute to D.radiodurans capacity to survive exposure to ionizing radiation. May play a role in DNA repair and genome reconstitution [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23478; Mature: 23478

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQDRGIAVHPLLADGAGGGGIQIGQAQQFIGPQAVAGLPHSALAPNGGGVGAQHAAVA
CCCCCCCEEEEEEEECCCCCCCEEECCHHHHCCCHHHHCCCCHHCCCCCCCCCCHHHHHH
DAAQLSVHRPLAAVPRNGTYQLAAGAGAFQTGGQPAPRFRIRVAFCDLCGQAHITGQRTR
HHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCHHHHH
QQRLRSPAPAPGFGRVDHKGEPRELIRRERRFWPHAKVALGAAQVVRCGKGGPVLRQGHA
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
QSLQGSRGMQQTIRAGGQPLRAEFKRDGRGLHAYILAYFTLKT
HHCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQPQDRGIAVHPLLADGAGGGGIQIGQAQQFIGPQAVAGLPHSALAPNGGGVGAQHAAVA
CCCCCCCEEEEEEEECCCCCCCEEECCHHHHCCCHHHHCCCCHHCCCCCCCCCCHHHHHH
DAAQLSVHRPLAAVPRNGTYQLAAGAGAFQTGGQPAPRFRIRVAFCDLCGQAHITGQRTR
HHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCHHHHH
QQRLRSPAPAPGFGRVDHKGEPRELIRRERRFWPHAKVALGAAQVVRCGKGGPVLRQGHA
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
QSLQGSRGMQQTIRAGGQPLRAEFKRDGRGLHAYILAYFTLKT
HHCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]