| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is surE
Identifier: 94984148
GI number: 94984148
Start: 36626
End: 37411
Strand: Reverse
Name: surE
Synonym: Dgeo_0040
Alternate gene names: 94984148
Gene position: 37411-36626 (Counterclockwise)
Preceding gene: 94984149
Following gene: 94984145
Centisome position: 1.52
GC content: 69.34
Gene sequence:
>786_bases ATGACGGCGCTCCCCTCTCCCGATCGGCCCCGCATCCTGGTGGCCAACGACGACGGCATCTTTTCGCCCGGCATCAAAGC GCTGGCCCTCGCACTGGCTGATGTGGGGGACGTGGTGGTGGTCGCGCCCGACGTGGAGCAGTCGGCGGTGGGGCACGGGA TCACCATCCGCCGTCCGCTGCGCTTCAAGCACACCGCCTCGGCGGGTTTTGGAACCCTGCCCGCGTACCGGGTGGACGGC ACGCCCGCCGATTGCGTGGTCTTGGGCGTTCACCTGCTTGGCAGGCCCGATCTGGTGGTCAGCGGCATCAACCTGGGGTC GAATCTCGGCGACGATCTGACGCATTCTGGGACGGTAGCGGCGGCCATCGAAGGGCTGGCGCTGGGCCTCCCCTCCATTG CCTTCAGCCAGCAGGGGAACGGCGGAGGCGAGTACAGCTTCACGGCGGGAGCCGCCTATGCTGCACGGCTGGCCCGCGCC GTGCTCGCCAAGGGCCTGCCACCACGTGTGCTGCTGAACGTGAACTTTCCGGCGGGGCTGCCGCGCGGCGTGCGCATCAC CAAGGTGGGCGAGCACCGCTGGGAAGATTCCATCATCACGCGCCACGACCCAGAAGGCCGCGAGTACCACTGGGTTGCCG GGCAAAGCCGCGCCGCCGACGCCCACGACCCGGACACCGATTACGGCGCGGTGCAGGCGGGGTACGTCAGCGTGACGCCG GTGCGCCTCGACCTGACGGCCCGTGACCTGCTGGGCGAACTGGCAGGGTACGTGCCGGAGATCTGA
Upstream 100 bases:
>100_bases AGCACGCGCCGACGTCGCCTCAGCCGGAGACCTGAGCTGATCCGGCCTGCTCCATGGCTCCGTGCCCGCCCGCAGCCCGC GCCCGCGCTACGCTGCCTGC
Downstream 100 bases:
>100_bases TCAGCGGCTCTCCAGCACCTCGAACACCCACGCGCGTACGCCCGCCGGGACGGGCAGCGGCGGCACGCTCCCTTCCCAGC GACTGGCAATCAGCGCCAGC
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTALPSPDRPRILVANDDGIFSPGIKALALALADVGDVVVVAPDVEQSAVGHGITIRRPLRFKHTASAGFGTLPAYRVDG TPADCVVLGVHLLGRPDLVVSGINLGSNLGDDLTHSGTVAAAIEGLALGLPSIAFSQQGNGGGEYSFTAGAAYAARLARA VLAKGLPPRVLLNVNFPAGLPRGVRITKVGEHRWEDSIITRHDPEGREYHWVAGQSRAADAHDPDTDYGAVQAGYVSVTP VRLDLTARDLLGELAGYVPEI
Sequences:
>Translated_261_residues MTALPSPDRPRILVANDDGIFSPGIKALALALADVGDVVVVAPDVEQSAVGHGITIRRPLRFKHTASAGFGTLPAYRVDG TPADCVVLGVHLLGRPDLVVSGINLGSNLGDDLTHSGTVAAAIEGLALGLPSIAFSQQGNGGGEYSFTAGAAYAARLARA VLAKGLPPRVLLNVNFPAGLPRGVRITKVGEHRWEDSIITRHDPEGREYHWVAGQSRAADAHDPDTDYGAVQAGYVSVTP VRLDLTARDLLGELAGYVPEI >Mature_260_residues TALPSPDRPRILVANDDGIFSPGIKALALALADVGDVVVVAPDVEQSAVGHGITIRRPLRFKHTASAGFGTLPAYRVDGT PADCVVLGVHLLGRPDLVVSGINLGSNLGDDLTHSGTVAAAIEGLALGLPSIAFSQQGNGGGEYSFTAGAAYAARLARAV LAKGLPPRVLLNVNFPAGLPRGVRITKVGEHRWEDSIITRHDPEGREYHWVAGQSRAADAHDPDTDYGAVQAGYVSVTPV RLDLTARDLLGELAGYVPEI
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=243, Percent_Identity=43.2098765432099, Blast_Score=167, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_DEIGD (Q1J2E1)
Other databases:
- EMBL: CP000359 - RefSeq: YP_603512.1 - ProteinModelPortal: Q1J2E1 - SMR: Q1J2E1 - STRING: Q1J2E1 - GeneID: 4057006 - GenomeReviews: CP000359_GR - KEGG: dge:Dgeo_0040 - NMPDR: fig|68909.1.peg.1493 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: KHTASAG - PhylomeDB: Q1J2E1 - ProtClustDB: PRK00346 - BioCyc: DGEO319795:DGEO_0040-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27229; Mature: 27098
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPSPDRPRILVANDDGIFSPGIKALALALADVGDVVVVAPDVEQSAVGHGITIRRPL CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEECCC RFKHTASAGFGTLPAYRVDGTPADCVVLGVHLLGRPDLVVSGINLGSNLGDDLTHSGTVA EEEECCCCCCCCCCEEEECCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCCHHH AAIEGLALGLPSIAFSQQGNGGGEYSFTAGAAYAARLARAVLAKGLPPRVLLNVNFPAGL HHHHHHHHCCCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC PRGVRITKVGEHRWEDSIITRHDPEGREYHWVAGQSRAADAHDPDTDYGAVQAGYVSVTP CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECEEEEEE VRLDLTARDLLGELAGYVPEI EEEECHHHHHHHHHHHHCCCC >Mature Secondary Structure TALPSPDRPRILVANDDGIFSPGIKALALALADVGDVVVVAPDVEQSAVGHGITIRRPL CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEECCC RFKHTASAGFGTLPAYRVDGTPADCVVLGVHLLGRPDLVVSGINLGSNLGDDLTHSGTVA EEEECCCCCCCCCCEEEECCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCCHHH AAIEGLALGLPSIAFSQQGNGGGEYSFTAGAAYAARLARAVLAKGLPPRVLLNVNFPAGL HHHHHHHHCCCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC PRGVRITKVGEHRWEDSIITRHDPEGREYHWVAGQSRAADAHDPDTDYGAVQAGYVSVTP CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECEEEEEE VRLDLTARDLLGELAGYVPEI EEEECHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA