Click here to switch to the map view.

The map label for this gene is pepD [H]

Identifier: 94994019

GI number: 94994019

Start: 589799

End: 591217

Strand: Direct

Name: pepD [H]

Synonym: MGAS10750_Spy0623

Alternate gene names: 94994019

Gene position: 589799-591217 (Clockwise)

Preceding gene: 94994016

Following gene: 94994020

Centisome position: 30.45

GC content: 42.35

Gene sequence:

>1419_bases
ATGGATAAAAAAATACAGCGTTTTTCATGTACAACTATACTCGTCGGTAAAAAGGCATCTTATGATGGCTCAACCATGGT
TGCTCGAACAGAAGATTCTCAAAATGGAGATTTCACGCCTAAAAAAATGATTGTGGTGAAACCAGAAGATCAACCGAGAC
ATTACCGTTCGGTGCAATCTTCCTTTGAAATGGACTTACCGGACAATCCCATGACTTACACGTCTGTTCCCGATGCGCTT
GGTGAAGATGGTATCTGGGCAGAAGCAGGCGTGAACGAGGCTAATGTGGCCATGTCAGCAACTGAAACCATCACTACCAA
TTCTCGTGTTTTAGGGGCAGATCCTCTAGTAGCTTCTGGTATTGGTGAGGAGGACATGGTAACCTTAGTGCTTCCTTATA
TCCGTTCTGCGCGTGAAGGGGTTTTGCGCCTTGGTGCCATTTTAGAAGACTATGGCACTTACGAGTCAAATGGTGTGGCT
TTTTCAGATAAACATGACATTTGGTGGCTGGAAACGATTGGTGGTCATCATTGGATTGCAAGACGGGTGCCAGATGATGC
TTATGTCACCAATCCCAATCAATTTGGCATTGATCATTTTGAATTTAACAATCCTGAAGATTACCTTTGCTCAGCTGATT
TAAAGGACTTTATTGACACGTATCACTTAGATTTAACCTATAGCCATGAGCATTTTAATCCGCGTTATGCCTTTGGTAGT
CAACGTGACAAAGACCGTCACTATAATACGCCACGTGCTTGGATCATGCAAAAATTCTTAAACCCAGAAATTGTGCAAGA
CCCGCGCAGCTTTGCCCTTGCTTGGTGTCAAAAACCTTACCGTAAAATAACAGTAGAAGATGTCAAATATGTATTGAGTA
GTCACTATCAGGACACGGTTTATGACCCTTACGGTTCAGAAGGAACTCCTGTTAGTAAGAAAATCTTTCGCCCTATTGGC
ATTAACCGTACCAGCCAAACCGCTATCTTACATATTCGTCCTAATAAACCTCAAGAAATTGCGGCTATCCAGTGGATGGC
TTATGGGTCAATGCCTTTTAATACCATGGTGCCTTTTTTCACACAGGTGAAGACTATTCCAGATTATTTTGCCAACACTT
ACGAAAATGTGTCTACCGACAATTTCTATTGGACCAACCGTCTGATTGCGGCTTTGGCAGATCCTCACTACAATCATCAT
GAAACTGATTTGGACAATTACTTGGAAGAAACCATGGCAAAAGGTCATGCCATGTTACATGCTGTGGAAGCACAGTTATT
GGCTGGTGAAACAGTCGATTTGGAAGAGGAAAATCAAAAGATGAGTGACTATGTGCAAGGAGAAACGCAGACGCTGTTGA
ACAAGATTCTCTTTGACGCTAGCAATCTAATGACCAATCGTTTCAGTTTGAGCGATTAA

Upstream 100 bases:

>100_bases
TACGAATAATAAGATAAGGAGGTGCTGCTGGAATTATGAAAATTTTTGTATCCAGTTCAATGGATATTTGATATAATCGT
CTTAAAAAGGAGGTCGTGAA

Downstream 100 bases:

>100_bases
TAGTGAAGCTAAGGCTGAGCAACTGCTTAGCCTTTTTTACGATAACTTTTTAGGAAAAGTAATCGCAAAAAGACAAAAAC
TTGGAAAAAAAATCAAAGTA

Product: Dipeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MDKKIQRFSCTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDAL
GEDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVA
FSDKHDIWWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGS
QRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKIFRPIG
INRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHH
ETDLDNYLEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Sequences:

>Translated_472_residues
MDKKIQRFSCTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDAL
GEDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVA
FSDKHDIWWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGS
QRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKIFRPIG
INRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHH
ETDLDNYLEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
>Mature_472_residues
MDKKIQRFSCTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDAL
GEDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVA
FSDKHDIWWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGS
QRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKIFRPIG
INRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHH
ETDLDNYLEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 53833; Mature: 53833

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKIQRFSCTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQS
CCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
SFEMDLPDNPMTYTSVPDALGEDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASG
HCCCCCCCCCCEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCC
IGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDKHDIWWLETIGGHHWIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEE
RRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGS
ECCCCCCEEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCC
QRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTV
CCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHCCCCCCC
YDPYGSEGTPVSKKIFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFF
CCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHH
TQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLH
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
HHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKKIQRFSCTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQS
CCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
SFEMDLPDNPMTYTSVPDALGEDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASG
HCCCCCCCCCCEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCC
IGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDKHDIWWLETIGGHHWIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEE
RRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGS
ECCCCCCEEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCC
QRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTV
CCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHCCCCCCC
YDPYGSEGTPVSKKIFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFF
CCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHH
TQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLH
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
HHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]