The gene/protein map for NC_008010 is currently unavailable.
Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is 94972034

Identifier: 94972034

GI number: 94972034

Start: 487680

End: 488114

Strand: Direct

Name: 94972034

Synonym: Dgeo_2566

Alternate gene names: NA

Gene position: 487680-488114 (Clockwise)

Preceding gene: 94972036

Following gene: 94972031

Centisome position: 84.94

GC content: 68.05

Gene sequence:

>435_bases
ATGACCAGTTCCAATACGCAGGCCGTTCAGCAGATGCTGCAAACCCACCCCCGCGGCAACCAGGTGGCTGACCCGCAGGC
GCTGCTCGAATGCATCAACGCCTGCTTCGAGTGCGCCGAGGTCTGCACCTCCTGTGCCGACGCCTGTCTGGGCGAGCAGG
GCCATCTCGCCCACCTGGTGCGCTGCATTCGCCTGAACCTCGACTGCGCGGACATCTGCGACACCACCGGCCGCACGCTG
CTCCGCCAGACCGAGCCGGACATGAACGTCCTGCGCGCCCAGGTGCAGGCGTGCCTGGTGGCCTGCCAGGCCTGCGGGGA
CGAGTGCGAACGGCACGCCCGCGAGATGAACATGCAGCACTGCGCGGTGTGCGCCGAAAGCTGCCGCCGCTGCGCGCAGG
CCTGCCAGAACCTGCTGAACAGCCTGGCGGCTTAA

Upstream 100 bases:

>100_bases
CCACCGGGCGTCTGAAGAGGCGAGCTGGCGGTCGGCCCACGTTCTGTCGGCGCGGTACCGCCCCCCCACCCAGCAGAGTT
CAGTTCTTAAGGAGGACAGA

Downstream 100 bases:

>100_bases
AGCGCGGCACGGCTGGGGGTGAGGGGGCCGTGGGCACCTCACCCTTTGCGGCGGTCAGGTCGGTTCCCCCCCAGGGGCGG
CGGGCAGCGTGAAGGCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTSSNTQAVQQMLQTHPRGNQVADPQALLECINACFECAEVCTSCADACLGEQGHLAHLVRCIRLNLDCADICDTTGRTL
LRQTEPDMNVLRAQVQACLVACQACGDECERHAREMNMQHCAVCAESCRRCAQACQNLLNSLAA

Sequences:

>Translated_144_residues
MTSSNTQAVQQMLQTHPRGNQVADPQALLECINACFECAEVCTSCADACLGEQGHLAHLVRCIRLNLDCADICDTTGRTL
LRQTEPDMNVLRAQVQACLVACQACGDECERHAREMNMQHCAVCAESCRRCAQACQNLLNSLAA
>Mature_143_residues
TSSNTQAVQQMLQTHPRGNQVADPQALLECINACFECAEVCTSCADACLGEQGHLAHLVRCIRLNLDCADICDTTGRTLL
RQTEPDMNVLRAQVQACLVACQACGDECERHAREMNMQHCAVCAESCRRCAQACQNLLNSLAA

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15672; Mature: 15541

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
16.0 %Cys+Met (Translated Protein)
12.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
15.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSNTQAVQQMLQTHPRGNQVADPQALLECINACFECAEVCTSCADACLGEQGHLAHLV
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RCIRLNLDCADICDTTGRTLLRQTEPDMNVLRAQVQACLVACQACGDECERHAREMNMQH
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAVCAESCRRCAQACQNLLNSLAA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSSNTQAVQQMLQTHPRGNQVADPQALLECINACFECAEVCTSCADACLGEQGHLAHLV
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RCIRLNLDCADICDTTGRTLLRQTEPDMNVLRAQVQACLVACQACGDECERHAREMNMQH
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAVCAESCRRCAQACQNLLNSLAA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA