Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94972011

Identifier: 94972011

GI number: 94972011

Start: 505269

End: 505496

Strand: Direct

Name: 94972011

Synonym: Dgeo_2543

Alternate gene names: NA

Gene position: 505269-505496 (Clockwise)

Preceding gene: 94972012

Following gene: 94972010

Centisome position: 88.01

GC content: 66.67

Gene sequence:

>228_bases
GTGATTCAAGCTCTTAAGGCCTGGGCGCGCGGCATCAAGCGCCAGCTTTTGGCGCTCTACCTCGCCTACCGCGATCCGCG
CACGCCCTGGTACGCCCGTGCCTGGGCGGCCCTCGTGCTCGCCTATGCCTTCAGCCCCATCGACCTGATCCCCGACTTCA
TCCCCGTGCTGGGTCTGCTGGATGATGCCATCCTGCTGCCCCTGGGTACACGCTGGCCCTGCGCCTGA

Upstream 100 bases:

>100_bases
GCTGAAGCCTTGGCATCGCCCCCAGAGAAGTGATGCGTCTCGTTTCGCTCGGCCATCCCCTGCCACCCCTTCGACGACTT
CCTCTCTCGCAGGTGACTTC

Downstream 100 bases:

>100_bases
TTCCCCCGCCCATCATGGCCGAGGCGCAGGAGCGCGCCGAGGCACTGGACCGGCAGGACCGCCCCACCAGCGTCGTTGGG
GCCGTGGTGATCGTCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MIQALKAWARGIKRQLLALYLAYRDPRTPWYARAWAALVLAYAFSPIDLIPDFIPVLGLLDDAILLPLGTRWPCA

Sequences:

>Translated_75_residues
MIQALKAWARGIKRQLLALYLAYRDPRTPWYARAWAALVLAYAFSPIDLIPDFIPVLGLLDDAILLPLGTRWPCA
>Mature_75_residues
MIQALKAWARGIKRQLLALYLAYRDPRTPWYARAWAALVLAYAFSPIDLIPDFIPVLGLLDDAILLPLGTRWPCA

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8495; Mature: 8495

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQALKAWARGIKRQLLALYLAYRDPRTPWYARAWAALVLAYAFSPIDLIPDFIPVLGLL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DDAILLPLGTRWPCA
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MIQALKAWARGIKRQLLALYLAYRDPRTPWYARAWAALVLAYAFSPIDLIPDFIPVLGLL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DDAILLPLGTRWPCA
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA