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The map label for this gene is 94971923

Identifier: 94971923

GI number: 94971923

Start: 28766

End: 29956

Strand: Direct

Name: 94971923

Synonym: Dgeo_2455

Alternate gene names: NA

Gene position: 28766-29956 (Clockwise)

Preceding gene: 94971924

Following gene: 94971922

Centisome position: 5.01

GC content: 64.4

Gene sequence:

>1191_bases
ATGAATCCAGACACCCTGTTCCAGGCCCTCGACCGGCAGCGCATTGAGACGCCCTCGTGGGGCTACGGTAACTCGGGGAC
CCGCTTCAAGACGTTTGCCGCGCCGGGTGCGGCGCGCACCATCTGGGAGAAGCTTGAGGACGCCGCCGAAGTGCACCGTC
TCAGCGGCATCGCGCCCACTGTCGCCCTGCATCTGCCGTGGGATGAGGTTGAAGACTACGCCGCACTGCGCCGCTTTGCC
GAGGAACGCGGTCTCACCCTCGGGGCAATCAATCCCAATGTGTTTCAGGCCGACACCTACCGGCTTGGGAGCATCGCCAA
TCCGGATCCGAAGGTGCGGGAGCAGGCCCTCGCGCATGTGCTGGACTGCGTAGCGGTGATGTCGCAGACCGGTGCCCGTG
ACCTCTCCCTGTGGGTGGCGGACGGCACGAACTACGCCGGGCAAGATGACCTGCGGGCCAGGAAACGCCGCGTGCGGGAG
GCGTTGCAGCGGGTGCATGACGCGCTTCCCGACGGCACGCGTTTGCTGGTTGAATACAAGCTGTTTGAACCCGCCTTCTA
TGCCACCGATCTCTTTGATTGGGGGGCTGCCTACGCCCACTGTCTCGCGGTGGGGGAAAAGGCCCAGGTGCTGGTGGACC
TAGGGCACCACGCGCAGAGTGTGAATATCGAGCAGATCGTTGCCTTTCTCCTCGATGAGGGACGGCTGGGCGGTTTTCAC
TTCAATGCCCGCCGCTATGCCGATGACGATCTGATCGTGGGCACCACCAATCCCTTTGAGCTGTTTTGCATCTACGCAGA
ACTTGTGGCGGCGGAGGAAGCCGCAGACGACCTCACCCGTGCCACCGCGCGCAACGTTGCCTACATGATCGACCAGAGTC
ACAACATTGAGCCGAAAGTAGAAGCGATGCTCCAGAGCGTTTTGAATTGCCAAGAAGCATATGCCAAAGCGCTGCTGATT
GACCGTGAACGCCTGCAGGCCGCGCAGCAGGGCGGGGATGTGCTGGAGGCGCACCGGGTGTTGCTCGAGGCTTTCCGCAC
CGATGTTCGCCCCCTCCTCGCCGACTGGCGCCGCCGGCGCGGTCTGCCGGAAGACCCCATCGCCGCCCACCGCGCGAGTG
GCTACCAGGCGAGGGTGGCCGCAGAGCGCGGGACCGTCGCCGCGGCTGGAGGGTTCCCGGTGGGGAGTTGA

Upstream 100 bases:

>100_bases
AGGTGGATGTCCTGATCACCAACCGCCCGCCATCGGCAGAAACGCGCGCTGCGCTGGATGCTGCTGATATCAGACTCATC
GTAACCGCACAGGAGGAGAC

Downstream 100 bases:

>100_bases
CGCTCCTTGGCTGCGCGGCGCCGCTCCCTCGTCCTTTCTTCCCCGCTCTGGAGGATTCTATGACCACCACCCACCCGCAG
ACCGTCATCCCCAACCGTTG

Product: rhamnose isomerase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNPDTLFQALDRQRIETPSWGYGNSGTRFKTFAAPGAARTIWEKLEDAAEVHRLSGIAPTVALHLPWDEVEDYAALRRFA
EERGLTLGAINPNVFQADTYRLGSIANPDPKVREQALAHVLDCVAVMSQTGARDLSLWVADGTNYAGQDDLRARKRRVRE
ALQRVHDALPDGTRLLVEYKLFEPAFYATDLFDWGAAYAHCLAVGEKAQVLVDLGHHAQSVNIEQIVAFLLDEGRLGGFH
FNARRYADDDLIVGTTNPFELFCIYAELVAAEEAADDLTRATARNVAYMIDQSHNIEPKVEAMLQSVLNCQEAYAKALLI
DRERLQAAQQGGDVLEAHRVLLEAFRTDVRPLLADWRRRRGLPEDPIAAHRASGYQARVAAERGTVAAAGGFPVGS

Sequences:

>Translated_396_residues
MNPDTLFQALDRQRIETPSWGYGNSGTRFKTFAAPGAARTIWEKLEDAAEVHRLSGIAPTVALHLPWDEVEDYAALRRFA
EERGLTLGAINPNVFQADTYRLGSIANPDPKVREQALAHVLDCVAVMSQTGARDLSLWVADGTNYAGQDDLRARKRRVRE
ALQRVHDALPDGTRLLVEYKLFEPAFYATDLFDWGAAYAHCLAVGEKAQVLVDLGHHAQSVNIEQIVAFLLDEGRLGGFH
FNARRYADDDLIVGTTNPFELFCIYAELVAAEEAADDLTRATARNVAYMIDQSHNIEPKVEAMLQSVLNCQEAYAKALLI
DRERLQAAQQGGDVLEAHRVLLEAFRTDVRPLLADWRRRRGLPEDPIAAHRASGYQARVAAERGTVAAAGGFPVGS
>Mature_396_residues
MNPDTLFQALDRQRIETPSWGYGNSGTRFKTFAAPGAARTIWEKLEDAAEVHRLSGIAPTVALHLPWDEVEDYAALRRFA
EERGLTLGAINPNVFQADTYRLGSIANPDPKVREQALAHVLDCVAVMSQTGARDLSLWVADGTNYAGQDDLRARKRRVRE
ALQRVHDALPDGTRLLVEYKLFEPAFYATDLFDWGAAYAHCLAVGEKAQVLVDLGHHAQSVNIEQIVAFLLDEGRLGGFH
FNARRYADDDLIVGTTNPFELFCIYAELVAAEEAADDLTRATARNVAYMIDQSHNIEPKVEAMLQSVLNCQEAYAKALLI
DRERLQAAQQGGDVLEAHRVLLEAFRTDVRPLLADWRRRRGLPEDPIAAHRASGYQARVAAERGTVAAAGGFPVGS

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013451
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 43818; Mature: 43818

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPDTLFQALDRQRIETPSWGYGNSGTRFKTFAAPGAARTIWEKLEDAAEVHRLSGIAPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCE
VALHLPWDEVEDYAALRRFAEERGLTLGAINPNVFQADTYRLGSIANPDPKVREQALAHV
EEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCEECCCCCCCCHHHHHHHHHHH
LDCVAVMSQTGARDLSLWVADGTNYAGQDDLRARKRRVREALQRVHDALPDGTRLLVEYK
HHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LFEPAFYATDLFDWGAAYAHCLAVGEKAQVLVDLGHHAQSVNIEQIVAFLLDEGRLGGFH
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCEE
FNARRYADDDLIVGTTNPFELFCIYAELVAAEEAADDLTRATARNVAYMIDQSHNIEPKV
ECCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
EAMLQSVLNCQEAYAKALLIDRERLQAAQQGGDVLEAHRVLLEAFRTDVRPLLADWRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPEDPIAAHRASGYQARVAAERGTVAAAGGFPVGS
CCCCCCHHHHHCCCCCEEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MNPDTLFQALDRQRIETPSWGYGNSGTRFKTFAAPGAARTIWEKLEDAAEVHRLSGIAPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCE
VALHLPWDEVEDYAALRRFAEERGLTLGAINPNVFQADTYRLGSIANPDPKVREQALAHV
EEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCEECCCCCCCCHHHHHHHHHHH
LDCVAVMSQTGARDLSLWVADGTNYAGQDDLRARKRRVREALQRVHDALPDGTRLLVEYK
HHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LFEPAFYATDLFDWGAAYAHCLAVGEKAQVLVDLGHHAQSVNIEQIVAFLLDEGRLGGFH
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCEE
FNARRYADDDLIVGTTNPFELFCIYAELVAAEEAADDLTRATARNVAYMIDQSHNIEPKV
ECCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
EAMLQSVLNCQEAYAKALLIDRERLQAAQQGGDVLEAHRVLLEAFRTDVRPLLADWRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPEDPIAAHRASGYQARVAAERGTVAAAGGFPVGS
CCCCCCHHHHHCCCCCEEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]