| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971880
Identifier: 94971880
GI number: 94971880
Start: 74623
End: 75783
Strand: Direct
Name: 94971880
Synonym: Dgeo_2412
Alternate gene names: NA
Gene position: 74623-75783 (Clockwise)
Preceding gene: 94971890
Following gene: 94971879
Centisome position: 13.0
GC content: 73.39
Gene sequence:
>1161_bases ATGCCTGATCTCCCCAATCTCCCGTCTCCCGAGACGCTGGCCCTGCCGGGGGTTGCCGCCCTGCTCACGGCGCTGCGCAA AGCGGTGGCCAGTGCTCAGCCCGAGCGCGAACTCACGGCGCTGCTTGCCCGGCTGACGGGTGGCTTCGCAGAGATCCGTG CGAGCTGGGGCGATGTGGTGGCGTCGGCGGGGCGCCCGGCGGGACCGCCCATCACGGTGCGTCTCTCCCACGGGGACGCG AGTGGCGAGCGGCATGTCGGCACGCTCACGCTGGCAGTGCCGGAGGCGTGGGCCGCGCTTGTTCCGGTGGCGGCGGAGTA CGCGCTGCTCGCCCGCCTGCAGGCGGCGGCGGCGGGCGCGGCGCGGCGGCGGGTGGGGGAAAGAACGCTGGACGCGCTGC TTTCCGGGGCCAGACCGGAGGGCGGGACGGCCGACAGCGAACCGGTTGTGGTGGCGGTCGCCGCCTTCGCTCGTCCCCCT GCGCCGGGCAGCGCTGGCCGCACCGCACACGCGCACGCGCTCGACGTGCTGGCCGCCGTGGGCGAGGGCTACTTTCTGGA ACGGGGCCTCACCGCGCATTCGACCGTTCGGGCTGGGCGGGCCGTGTGGCTGTGGCATCCCCTCCAGCCCGAACGCGAGG CGCGCGACCTCCACGCAGCCCTGACCGCCAGCACCGCGCAAGACGTGCGCCTGGGGGTCAGCGGGACCCATGTGGGGCTG CTTTCCGTCCGGGACGCCGAACGCGAGGCCCGTCACGCCCTGGCTGCGACGCGCGAGGAGCGGGCCTTCACCACCTACCA CACGATGGATCCGCTCTACGCGCTGCTCGCGGGCGGCGCTCTCTCGACCCTGCGCGATCAGGTGCAGGCCCGCCTCGCCG TGCTGGAGGACGGAGGCCGGGTGGAGGCGACCCTGCGCGCCTATCTGGCTTTCTCGGGTCCGCTGCCCGATCTGGCCCGG CGCCTGAATATCCACGTCAACACGCTGCGCTATCGCCTGCGCCGCGCGGAGGAGGTGCTGGGCGGCAGCCTGCGCGACCC GGCGCTCGTGGCGCGGCTGTACCTGGCGTTTGAGGCAGAGGGGGAGAGCGGTCTGGACACCGCTGCGGCGGATCAAGTGA GTGCGTCTGTCTGGGATCCCTGCACTGGCTGTGCAGGCTGA
Upstream 100 bases:
>100_bases CCTGGTTGCGGGTTGTCGGTCCCTCAGCATAAGTCCGGCAGTTGCTCCGCGAAATGGTGCAAAAGGTGAATCTGAAGAGG GCCTCTTGTACTTTTGAACC
Downstream 100 bases:
>100_bases GCGGCGGGCTCCGGCCCAAACGCCCGTTTGCTCCCCCCGGACTTTGCTGCTACCATCCCCGCAAGCACAATGCGACGCCC TACGCCGTCCGGGTCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDA SGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPP APGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLAR RLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG
Sequences:
>Translated_386_residues MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDA SGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPP APGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLAR RLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG >Mature_385_residues PDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDAS GERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPA PGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGLL SVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLARR LNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40406; Mature: 40275
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVV CCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH ASAGRPAGPPITVRLSHGDASGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGA HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPAPGSAGRTAHAHALDVLAAV HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHH GEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL CCCCEECCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEECCCCCEEEE LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGR EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC VEATLRAYLAFSGPLPDLARRLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAE CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECC GESGLDTAAADQVSASVWDPCTGCAG CCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVV CCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH ASAGRPAGPPITVRLSHGDASGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGA HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPAPGSAGRTAHAHALDVLAAV HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHH GEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL CCCCEECCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEECCCCCEEEE LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGR EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC VEATLRAYLAFSGPLPDLARRLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAE CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECC GESGLDTAAADQVSASVWDPCTGCAG CCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA