Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is livK [C]

Identifier: 94971879

GI number: 94971879

Start: 75909

End: 77054

Strand: Direct

Name: livK [C]

Synonym: Dgeo_2411

Alternate gene names: 94971879

Gene position: 75909-77054 (Clockwise)

Preceding gene: 94971880

Following gene: 94971878

Centisome position: 13.22

GC content: 64.57

Gene sequence:

>1146_bases
ATGATGAGGCCCGTCCGCCTGCTCCTGACCGCTCTGCTCGCCGCCTCGTCCCTTGCGCTCGCAGAGGTACGGGTGGGCGT
GATCGTCTCCTCGACCGGGCCGGCGGCCAGCCTGGGCATCCCCGAGAAAAACACGGTTTCGCTGCTGCCGCAAACCATCG
GCGGCCAGAAGATCGTCTACACTGTCCTCGACGACGCCTCCGACACGACCGCTGCCGTCACCGCCGCGCGCAAGCTGATT
CAGGACAACAAGGTAGACCTGATCATCGGCACGACGACCACGCCTGCGTCTCTGGCGATGATTGACGTGGTGTCGGAGGC
GAAGGTACCCATGATCAGCCTGGCGGCCTCCGAGGCGATCATCAAGCCGGTAGACGACAAACGCCGCTGGGTGTTTAAGA
CCCCGCAGACCGACGCGATCATGGCCGCCGCCATCGCGCAGCACATGCAGCAAAACGGCGTGAAAACCGTCGGCTACATC
GGTTTCAACGACGCCTACGGCGAGGGCTGGCTGAACGAGCTTCAGAAAAACGCGGCGGCCCGCGGCATCAAGGTGGTCGC
GACCGAACGCTACGGGCGCAGCGATACCAGCGTGACCGGCCAGATCCTCAAGATCCTGGCCGCCAAACCCGACGCGGTGC
TGATCGGGGCATCTGGTGTGCCTGCCGTCCTGCCGCAAAAGACCCTCAAGGACCGCGGTTTTGCGGGCAAGATCTACCAG
ACGCACGGGGTCGCCAACGCCGACTTCCTGCGGGTGGGCGGCAAGGATGTGGAAGGCGCGATCCTGCCCGCTGGGCCGGT
GCTGGTGGCCGACCAGCTTCCCGCCACCAACCCGCTGAAGAAGGTGGGCCTGGATTACACCAGCCGCTACGAGGCCAAGT
ACGGCCAGAACTCCGTCAGCACTTTTGGTGCGCACCTGTGGGATGCGGGCCTGATTCTGCAAAAGGCGATCCCGGTCGCC
CTGAAAAAGACCAAACCCGGTACGCCTGAGTTCCGCGCGGCCCTGCGGGACGCCCTGGAGAACACCAAGAACGTGATCGG
CGCCCACGGCATCTTCAATTTCGGTCCCCAGGATCACCTGGGTCTGGACGCCCGGAGCCGCGTGATGGTGCAGGTCGCGG
ACGGCACCTGGAAACTGATCAAGTAA

Upstream 100 bases:

>100_bases
GTTTGCTCCCCCCGGACTTTGCTGCTACCATCCCCGCAAGCACAATGCGACGCCCTACGCCGTCCGGGTCACCCGGAGTG
GCTCCCTGTGGAGGTTCACC

Downstream 100 bases:

>100_bases
GGCCCGAACGAGGCGGGGCGTTGACAGAGGGAAGAGGGAACTGGCTCACGGCCCTGCGCGAGCGGCTGGGGGGACGGGTC
AGCGTGCAGTCCGGCGACCT

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI
QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI
GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ
THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA
LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK

Sequences:

>Translated_381_residues
MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI
QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI
GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ
THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA
LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK
>Mature_381_residues
MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI
QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI
GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ
THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA
LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40317; Mature: 40317

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVY
CCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHEECHHHCCCCEEEE
TVLDDASDTTAAVTAARKLIQDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAI
EEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCHHH
IKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYIGFNDAYGEGWLNELQKNAAA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ
CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEE
THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVS
ECCCCCCCEEEECCCCCCCEEECCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCHHH
TFGAHLWDAGLILQKAIPVALKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHL
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
GLDARSRVMVQVADGTWKLIK
CCCCCCEEEEEEECCEEEECC
>Mature Secondary Structure
MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVY
CCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHEECHHHCCCCEEEE
TVLDDASDTTAAVTAARKLIQDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAI
EEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCHHH
IKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYIGFNDAYGEGWLNELQKNAAA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ
CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEE
THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVS
ECCCCCCCEEEECCCCCCCEEECCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCHHH
TFGAHLWDAGLILQKAIPVALKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHL
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
GLDARSRVMVQVADGTWKLIK
CCCCCCEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]