| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 94971879
GI number: 94971879
Start: 75909
End: 77054
Strand: Direct
Name: livK [C]
Synonym: Dgeo_2411
Alternate gene names: 94971879
Gene position: 75909-77054 (Clockwise)
Preceding gene: 94971880
Following gene: 94971878
Centisome position: 13.22
GC content: 64.57
Gene sequence:
>1146_bases ATGATGAGGCCCGTCCGCCTGCTCCTGACCGCTCTGCTCGCCGCCTCGTCCCTTGCGCTCGCAGAGGTACGGGTGGGCGT GATCGTCTCCTCGACCGGGCCGGCGGCCAGCCTGGGCATCCCCGAGAAAAACACGGTTTCGCTGCTGCCGCAAACCATCG GCGGCCAGAAGATCGTCTACACTGTCCTCGACGACGCCTCCGACACGACCGCTGCCGTCACCGCCGCGCGCAAGCTGATT CAGGACAACAAGGTAGACCTGATCATCGGCACGACGACCACGCCTGCGTCTCTGGCGATGATTGACGTGGTGTCGGAGGC GAAGGTACCCATGATCAGCCTGGCGGCCTCCGAGGCGATCATCAAGCCGGTAGACGACAAACGCCGCTGGGTGTTTAAGA CCCCGCAGACCGACGCGATCATGGCCGCCGCCATCGCGCAGCACATGCAGCAAAACGGCGTGAAAACCGTCGGCTACATC GGTTTCAACGACGCCTACGGCGAGGGCTGGCTGAACGAGCTTCAGAAAAACGCGGCGGCCCGCGGCATCAAGGTGGTCGC GACCGAACGCTACGGGCGCAGCGATACCAGCGTGACCGGCCAGATCCTCAAGATCCTGGCCGCCAAACCCGACGCGGTGC TGATCGGGGCATCTGGTGTGCCTGCCGTCCTGCCGCAAAAGACCCTCAAGGACCGCGGTTTTGCGGGCAAGATCTACCAG ACGCACGGGGTCGCCAACGCCGACTTCCTGCGGGTGGGCGGCAAGGATGTGGAAGGCGCGATCCTGCCCGCTGGGCCGGT GCTGGTGGCCGACCAGCTTCCCGCCACCAACCCGCTGAAGAAGGTGGGCCTGGATTACACCAGCCGCTACGAGGCCAAGT ACGGCCAGAACTCCGTCAGCACTTTTGGTGCGCACCTGTGGGATGCGGGCCTGATTCTGCAAAAGGCGATCCCGGTCGCC CTGAAAAAGACCAAACCCGGTACGCCTGAGTTCCGCGCGGCCCTGCGGGACGCCCTGGAGAACACCAAGAACGTGATCGG CGCCCACGGCATCTTCAATTTCGGTCCCCAGGATCACCTGGGTCTGGACGCCCGGAGCCGCGTGATGGTGCAGGTCGCGG ACGGCACCTGGAAACTGATCAAGTAA
Upstream 100 bases:
>100_bases GTTTGCTCCCCCCGGACTTTGCTGCTACCATCCCCGCAAGCACAATGCGACGCCCTACGCCGTCCGGGTCACCCGGAGTG GCTCCCTGTGGAGGTTCACC
Downstream 100 bases:
>100_bases GGCCCGAACGAGGCGGGGCGTTGACAGAGGGAAGAGGGAACTGGCTCACGGCCCTGCGCGAGCGGCTGGGGGGACGGGTC AGCGTGCAGTCCGGCGACCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK
Sequences:
>Translated_381_residues MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK >Mature_381_residues MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVYTVLDDASDTTAAVTAARKLI QDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAIIKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYI GFNDAYGEGWLNELQKNAAARGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVSTFGAHLWDAGLILQKAIPVA LKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHLGLDARSRVMVQVADGTWKLIK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40317; Mature: 40317
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVY CCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHEECHHHCCCCEEEE TVLDDASDTTAAVTAARKLIQDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAI EEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCHHH IKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYIGFNDAYGEGWLNELQKNAAA CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH RGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEE THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVS ECCCCCCCEEEECCCCCCCEEECCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCHHH TFGAHLWDAGLILQKAIPVALKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHL HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC GLDARSRVMVQVADGTWKLIK CCCCCCEEEEEEECCEEEECC >Mature Secondary Structure MMRPVRLLLTALLAASSLALAEVRVGVIVSSTGPAASLGIPEKNTVSLLPQTIGGQKIVY CCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHEECHHHCCCCEEEE TVLDDASDTTAAVTAARKLIQDNKVDLIIGTTTTPASLAMIDVVSEAKVPMISLAASEAI EEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCHHH IKPVDDKRRWVFKTPQTDAIMAAAIAQHMQQNGVKTVGYIGFNDAYGEGWLNELQKNAAA CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH RGIKVVATERYGRSDTSVTGQILKILAAKPDAVLIGASGVPAVLPQKTLKDRGFAGKIYQ CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEE THGVANADFLRVGGKDVEGAILPAGPVLVADQLPATNPLKKVGLDYTSRYEAKYGQNSVS ECCCCCCCEEEECCCCCCCEEECCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCHHH TFGAHLWDAGLILQKAIPVALKKTKPGTPEFRAALRDALENTKNVIGAHGIFNFGPQDHL HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC GLDARSRVMVQVADGTWKLIK CCCCCCEEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]