Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is 94971880

Identifier: 94971880

GI number: 94971880

Start: 74623

End: 75783

Strand: Direct

Name: 94971880

Synonym: Dgeo_2412

Alternate gene names: NA

Gene position: 74623-75783 (Clockwise)

Preceding gene: 94971890

Following gene: 94971879

Centisome position: 13.0

GC content: 73.39

Gene sequence:

>1161_bases
ATGCCTGATCTCCCCAATCTCCCGTCTCCCGAGACGCTGGCCCTGCCGGGGGTTGCCGCCCTGCTCACGGCGCTGCGCAA
AGCGGTGGCCAGTGCTCAGCCCGAGCGCGAACTCACGGCGCTGCTTGCCCGGCTGACGGGTGGCTTCGCAGAGATCCGTG
CGAGCTGGGGCGATGTGGTGGCGTCGGCGGGGCGCCCGGCGGGACCGCCCATCACGGTGCGTCTCTCCCACGGGGACGCG
AGTGGCGAGCGGCATGTCGGCACGCTCACGCTGGCAGTGCCGGAGGCGTGGGCCGCGCTTGTTCCGGTGGCGGCGGAGTA
CGCGCTGCTCGCCCGCCTGCAGGCGGCGGCGGCGGGCGCGGCGCGGCGGCGGGTGGGGGAAAGAACGCTGGACGCGCTGC
TTTCCGGGGCCAGACCGGAGGGCGGGACGGCCGACAGCGAACCGGTTGTGGTGGCGGTCGCCGCCTTCGCTCGTCCCCCT
GCGCCGGGCAGCGCTGGCCGCACCGCACACGCGCACGCGCTCGACGTGCTGGCCGCCGTGGGCGAGGGCTACTTTCTGGA
ACGGGGCCTCACCGCGCATTCGACCGTTCGGGCTGGGCGGGCCGTGTGGCTGTGGCATCCCCTCCAGCCCGAACGCGAGG
CGCGCGACCTCCACGCAGCCCTGACCGCCAGCACCGCGCAAGACGTGCGCCTGGGGGTCAGCGGGACCCATGTGGGGCTG
CTTTCCGTCCGGGACGCCGAACGCGAGGCCCGTCACGCCCTGGCTGCGACGCGCGAGGAGCGGGCCTTCACCACCTACCA
CACGATGGATCCGCTCTACGCGCTGCTCGCGGGCGGCGCTCTCTCGACCCTGCGCGATCAGGTGCAGGCCCGCCTCGCCG
TGCTGGAGGACGGAGGCCGGGTGGAGGCGACCCTGCGCGCCTATCTGGCTTTCTCGGGTCCGCTGCCCGATCTGGCCCGG
CGCCTGAATATCCACGTCAACACGCTGCGCTATCGCCTGCGCCGCGCGGAGGAGGTGCTGGGCGGCAGCCTGCGCGACCC
GGCGCTCGTGGCGCGGCTGTACCTGGCGTTTGAGGCAGAGGGGGAGAGCGGTCTGGACACCGCTGCGGCGGATCAAGTGA
GTGCGTCTGTCTGGGATCCCTGCACTGGCTGTGCAGGCTGA

Upstream 100 bases:

>100_bases
CCTGGTTGCGGGTTGTCGGTCCCTCAGCATAAGTCCGGCAGTTGCTCCGCGAAATGGTGCAAAAGGTGAATCTGAAGAGG
GCCTCTTGTACTTTTGAACC

Downstream 100 bases:

>100_bases
GCGGCGGGCTCCGGCCCAAACGCCCGTTTGCTCCCCCCGGACTTTGCTGCTACCATCCCCGCAAGCACAATGCGACGCCC
TACGCCGTCCGGGTCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDA
SGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPP
APGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL
LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLAR
RLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG

Sequences:

>Translated_386_residues
MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDA
SGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPP
APGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL
LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLAR
RLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG
>Mature_385_residues
PDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVVASAGRPAGPPITVRLSHGDAS
GERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGAARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPA
PGSAGRTAHAHALDVLAAVGEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGLL
SVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGRVEATLRAYLAFSGPLPDLARR
LNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAEGESGLDTAAADQVSASVWDPCTGCAG

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40406; Mature: 40275

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVV
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
ASAGRPAGPPITVRLSHGDASGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGA
HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPAPGSAGRTAHAHALDVLAAV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHH
GEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL
CCCCEECCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEECCCCCEEEE
LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGR
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
VEATLRAYLAFSGPLPDLARRLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAE
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECC
GESGLDTAAADQVSASVWDPCTGCAG
CCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PDLPNLPSPETLALPGVAALLTALRKAVASAQPERELTALLARLTGGFAEIRASWGDVV
CCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
ASAGRPAGPPITVRLSHGDASGERHVGTLTLAVPEAWAALVPVAAEYALLARLQAAAAGA
HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRVGERTLDALLSGARPEGGTADSEPVVVAVAAFARPPAPGSAGRTAHAHALDVLAAV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHH
GEGYFLERGLTAHSTVRAGRAVWLWHPLQPEREARDLHAALTASTAQDVRLGVSGTHVGL
CCCCEECCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEECCCCCEEEE
LSVRDAEREARHALAATREERAFTTYHTMDPLYALLAGGALSTLRDQVQARLAVLEDGGR
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
VEATLRAYLAFSGPLPDLARRLNIHVNTLRYRLRRAEEVLGGSLRDPALVARLYLAFEAE
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECC
GESGLDTAAADQVSASVWDPCTGCAG
CCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA