| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314794
Identifier: 94314794
GI number: 94314794
Start: 71186
End: 72658
Strand: Direct
Name: 94314794
Synonym: Rmet_5875
Alternate gene names: NA
Gene position: 71186-72658 (Clockwise)
Preceding gene: 94314793
Following gene: 94314795
Centisome position: 2.76
GC content: 64.36
Gene sequence:
>1473_bases ATGAAGAAGCGCTCGCTGCAGGGCATTGGTCTTGCCAGTTGCTCTACGATGTGCCTGCTTGGCGGCATGGCTCATGCGCA GACTCCGCCCGACGATGGGCCGCCGGCGGCCGCCAAGCTCGAAACGCTGCAGAAGGAACTGACCGAACAGGCGAAGCAGC TGGAGGCGATGAAACGGGCGCTGGCCGAACAGGAGGCCACGATCCGCGAACTGCGCAGCACGGTGGATAGCGAATCGCTG GCGCGCAAACGTGGTGGCCAGGCCGGGGTAGGCACCGGCGTGACGCCGAGCAACATGGCGACCAATGCCGCCGCGGCCGC CGCGGGCGCCAGCGCCACACAGATCAACAGCACGGCCCAGCAAGGCGTACAGGCCCAACAGGCGCCATCCGACGCGCCGC CGCAGGCCGTGGCGCCACAGAACGTGCAGCAGGGCCAGGCCGCGCAGGGCGACCAGCAAGGCGAGTCCGCCGCGGGTCCC GAACAACCGGTGGGCAGGCCGCCGGAGCGCGATACGCGTCCACCAGAGATCGCGCCAATCTTCGACCAGCCTGGCGTACT CACGCCCCAGGGCAAGATCGTGATCGAACCGAGCTTCCAGTACGGCTACTCGTCGAGTGACCGCGCGGTACTGGTCGGCT ACACGGTGATTCCCGCGCTGCTGATCGGCCTGATCGACGTGCGCGAGATCAAGACGTCGACGTACATCACGTCCATGGCC TTCCGCTACGGCATTACCAAGCGTCTCGAGATCGAAGCCAAGGTGCCGTACGTGCATTCGAGCAGCGATACCGTCAGCCG CGAAATCTTCACCGGCACCGCCGTCGACAACGCCTTCAATGCGAGCGGCAGCGGCCTGGGCGACGTTGAGGCGACGTTGC GCTACCAGCTCAACTACGGCAACGAGAAGATGCCGTACTTCATCGGCTGGCTGCGCTACAAGTCGAACACCGGCAAGGAT CCGTTCGAGGTGGTGACCGATTGCGTGACCCGTTGTGTCAGCAACACTACCGGCACCGGGTTGCCGCTGGGCATGCCGAC CGGCACCGGCTTCCAGGCAATCCAGCCGGGCGTCACGTGGCTGTTGCCGACCGATCCGGCGGTGTTCTTTGGTACCTTCA GCTACCTGCACAACTTCGCGCGTGACAACATCTATCGCACCGTGCTGAACGGCCAGCAGGAATTCCTCGGCAAGATCGCA CCGGGAGACATCTTCGAGTTCAACTTTGGCATGGGCCTGTCGCTCAACGAGCACGCGTCGTTCAGTATCGGCTACGACCA GAGCATCATCTGGCCGACCAAGCAGAACGGGCAGACCGTCCCAGGCTCCGTGCGCATCACGCAGGGCACGCTGCTCGTGG GCTACTCCTATCGCTTCAACAACCGGTACACACTGAACCTTTCGGTGGGCGCGGGCCTGACGCGAGACACACCGGATCTG ACGGTGACGGTGCGTCTACCGATCACATTCTGA
Upstream 100 bases:
>100_bases AGGCAGTCGCAGGAAACTTTGGTCGTGGAAAGGAAGACATCGACGAACTGGTAGCGGGCCTTAGCGTTTTTGCCCGCCGT CCTCGGGGGAGGTAGACGTC
Downstream 100 bases:
>100_bases TGGCGTTCGCACAGGCGAAGTGACGCGCGAAATTCTCCGTTTGGCACCCCACTTCCCGTCATCCATTCGGTACCTTGCGC AGGCTTCGTGGAGAGAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKKRSLQGIGLASCSTMCLLGGMAHAQTPPDDGPPAAAKLETLQKELTEQAKQLEAMKRALAEQEATIRELRSTVDSESL ARKRGGQAGVGTGVTPSNMATNAAAAAAGASATQINSTAQQGVQAQQAPSDAPPQAVAPQNVQQGQAAQGDQQGESAAGP EQPVGRPPERDTRPPEIAPIFDQPGVLTPQGKIVIEPSFQYGYSSSDRAVLVGYTVIPALLIGLIDVREIKTSTYITSMA FRYGITKRLEIEAKVPYVHSSSDTVSREIFTGTAVDNAFNASGSGLGDVEATLRYQLNYGNEKMPYFIGWLRYKSNTGKD PFEVVTDCVTRCVSNTTGTGLPLGMPTGTGFQAIQPGVTWLLPTDPAVFFGTFSYLHNFARDNIYRTVLNGQQEFLGKIA PGDIFEFNFGMGLSLNEHASFSIGYDQSIIWPTKQNGQTVPGSVRITQGTLLVGYSYRFNNRYTLNLSVGAGLTRDTPDL TVTVRLPITF
Sequences:
>Translated_490_residues MKKRSLQGIGLASCSTMCLLGGMAHAQTPPDDGPPAAAKLETLQKELTEQAKQLEAMKRALAEQEATIRELRSTVDSESL ARKRGGQAGVGTGVTPSNMATNAAAAAAGASATQINSTAQQGVQAQQAPSDAPPQAVAPQNVQQGQAAQGDQQGESAAGP EQPVGRPPERDTRPPEIAPIFDQPGVLTPQGKIVIEPSFQYGYSSSDRAVLVGYTVIPALLIGLIDVREIKTSTYITSMA FRYGITKRLEIEAKVPYVHSSSDTVSREIFTGTAVDNAFNASGSGLGDVEATLRYQLNYGNEKMPYFIGWLRYKSNTGKD PFEVVTDCVTRCVSNTTGTGLPLGMPTGTGFQAIQPGVTWLLPTDPAVFFGTFSYLHNFARDNIYRTVLNGQQEFLGKIA PGDIFEFNFGMGLSLNEHASFSIGYDQSIIWPTKQNGQTVPGSVRITQGTLLVGYSYRFNNRYTLNLSVGAGLTRDTPDL TVTVRLPITF >Mature_490_residues MKKRSLQGIGLASCSTMCLLGGMAHAQTPPDDGPPAAAKLETLQKELTEQAKQLEAMKRALAEQEATIRELRSTVDSESL ARKRGGQAGVGTGVTPSNMATNAAAAAAGASATQINSTAQQGVQAQQAPSDAPPQAVAPQNVQQGQAAQGDQQGESAAGP EQPVGRPPERDTRPPEIAPIFDQPGVLTPQGKIVIEPSFQYGYSSSDRAVLVGYTVIPALLIGLIDVREIKTSTYITSMA FRYGITKRLEIEAKVPYVHSSSDTVSREIFTGTAVDNAFNASGSGLGDVEATLRYQLNYGNEKMPYFIGWLRYKSNTGKD PFEVVTDCVTRCVSNTTGTGLPLGMPTGTGFQAIQPGVTWLLPTDPAVFFGTFSYLHNFARDNIYRTVLNGQQEFLGKIA PGDIFEFNFGMGLSLNEHASFSIGYDQSIIWPTKQNGQTVPGSVRITQGTLLVGYSYRFNNRYTLNLSVGAGLTRDTPDL TVTVRLPITF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52474; Mature: 52474
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRSLQGIGLASCSTMCLLGGMAHAQTPPDDGPPAAAKLETLQKELTEQAKQLEAMKRA CCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAEQEATIRELRSTVDSESLARKRGGQAGVGTGVTPSNMATNAAAAAAGASATQINSTAQ HHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QGVQAQQAPSDAPPQAVAPQNVQQGQAAQGDQQGESAAGPEQPVGRPPERDTRPPEIAPI HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FDQPGVLTPQGKIVIEPSFQYGYSSSDRAVLVGYTVIPALLIGLIDVREIKTSTYITSMA CCCCCEECCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRYGITKRLEIEAKVPYVHSSSDTVSREIFTGTAVDNAFNASGSGLGDVEATLRYQLNYG HHHCCCEEEEEEEECCEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEEEECC NEKMPYFIGWLRYKSNTGKDPFEVVTDCVTRCVSNTTGTGLPLGMPTGTGFQAIQPGVTW CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCEEE LLPTDPAVFFGTFSYLHNFARDNIYRTVLNGQQEFLGKIAPGDIFEFNFGMGLSLNEHAS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCCEECCCCC FSIGYDQSIIWPTKQNGQTVPGSVRITQGTLLVGYSYRFNNRYTLNLSVGAGLTRDTPDL EEECCCCEEEECCCCCCCCCCCEEEEECCEEEEEEEEEECCEEEEEEEECCCCCCCCCCE TVTVRLPITF EEEEEEEECC >Mature Secondary Structure MKKRSLQGIGLASCSTMCLLGGMAHAQTPPDDGPPAAAKLETLQKELTEQAKQLEAMKRA CCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAEQEATIRELRSTVDSESLARKRGGQAGVGTGVTPSNMATNAAAAAAGASATQINSTAQ HHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QGVQAQQAPSDAPPQAVAPQNVQQGQAAQGDQQGESAAGPEQPVGRPPERDTRPPEIAPI HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FDQPGVLTPQGKIVIEPSFQYGYSSSDRAVLVGYTVIPALLIGLIDVREIKTSTYITSMA CCCCCEECCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRYGITKRLEIEAKVPYVHSSSDTVSREIFTGTAVDNAFNASGSGLGDVEATLRYQLNYG HHHCCCEEEEEEEECCEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEEEECC NEKMPYFIGWLRYKSNTGKDPFEVVTDCVTRCVSNTTGTGLPLGMPTGTGFQAIQPGVTW CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCEEE LLPTDPAVFFGTFSYLHNFARDNIYRTVLNGQQEFLGKIAPGDIFEFNFGMGLSLNEHAS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCCEECCCCC FSIGYDQSIIWPTKQNGQTVPGSVRITQGTLLVGYSYRFNNRYTLNLSVGAGLTRDTPDL EEECCCCEEEECCCCCCCCCCCEEEEECCEEEEEEEEEECCEEEEEEEECCCCCCCCCCE TVTVRLPITF EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA