| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314795
Identifier: 94314795
GI number: 94314795
Start: 72827
End: 73339
Strand: Direct
Name: 94314795
Synonym: Rmet_5876
Alternate gene names: NA
Gene position: 72827-73339 (Clockwise)
Preceding gene: 94314794
Following gene: 94314796
Centisome position: 2.82
GC content: 64.13
Gene sequence:
>513_bases ATGCGCAAACGGATCTTCTGGTTGTTGCCCGACCTGGCGAGCGCGCGCCGTACCATGGACGACCTGCTGCTGGCTCGCAT CGAGAATAGCCACATCCATTTCGTGGGACGCGATGGCGCCGACATGACGGGTCTGCACGAGGCAAACCTGTTCCAGACTT CGGACATCGTTCACGCTGCGGAAATGGGTCTGATGGTTGGCGGTGGTGTCGGTATCGTGGCCGGTGTGGTGGTGGCGATG TTCCCGATCGTCAGCGACTCTCCGCAATGGGGCCTGGTCGGCGTGCTCGCCGTGCTGGGCGCCGTGTTTGGCGCGTGGGC CGCGAGCATGATCGGCAGCTCGGCGCCGAACAGTCGACTACGGTCGTTCGAGAAGGACATCGAGGCAGGCAAACTGCTGC TGATGGTGGATGTGCCGCGCGGCCGTGTTGAAGAAGTCGAGGCGCTGCTGCAGAAGGCGCACCCCGAAGCGTCCTTCGCC GGCCTGGATCCTGCTGTACCGGCCTTCCCCTGA
Upstream 100 bases:
>100_bases GGTACCTTGCGCAGGCTTCGTGGAGAGAGTAGAACAGCTACTAACCCGTCCCGAAGACGGATCATCAGAGTACGGGGCGG CCTGACAGAGGAGGCTAGTC
Downstream 100 bases:
>100_bases TCGAAGCAGGGCCAGGCCTCTCCCTTCGCGCGCCCGTCGTGGCGCGCCCCGGCGTGTGTCCCATCACGCGCCATGCTGCG GCCACACCTGAAACCGGTAC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRKRIFWLLPDLASARRTMDDLLLARIENSHIHFVGRDGADMTGLHEANLFQTSDIVHAAEMGLMVGGGVGIVAGVVVAM FPIVSDSPQWGLVGVLAVLGAVFGAWAASMIGSSAPNSRLRSFEKDIEAGKLLLMVDVPRGRVEEVEALLQKAHPEASFA GLDPAVPAFP
Sequences:
>Translated_170_residues MRKRIFWLLPDLASARRTMDDLLLARIENSHIHFVGRDGADMTGLHEANLFQTSDIVHAAEMGLMVGGGVGIVAGVVVAM FPIVSDSPQWGLVGVLAVLGAVFGAWAASMIGSSAPNSRLRSFEKDIEAGKLLLMVDVPRGRVEEVEALLQKAHPEASFA GLDPAVPAFP >Mature_170_residues MRKRIFWLLPDLASARRTMDDLLLARIENSHIHFVGRDGADMTGLHEANLFQTSDIVHAAEMGLMVGGGVGIVAGVVVAM FPIVSDSPQWGLVGVLAVLGAVFGAWAASMIGSSAPNSRLRSFEKDIEAGKLLLMVDVPRGRVEEVEALLQKAHPEASFA GLDPAVPAFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18112; Mature: 18112
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRIFWLLPDLASARRTMDDLLLARIENSHIHFVGRDGADMTGLHEANLFQTSDIVHAA CCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH EMGLMVGGGVGIVAGVVVAMFPIVSDSPQWGLVGVLAVLGAVFGAWAASMIGSSAPNSRL HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RSFEKDIEAGKLLLMVDVPRGRVEEVEALLQKAHPEASFAGLDPAVPAFP HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKRIFWLLPDLASARRTMDDLLLARIENSHIHFVGRDGADMTGLHEANLFQTSDIVHAA CCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH EMGLMVGGGVGIVAGVVVAMFPIVSDSPQWGLVGVLAVLGAVFGAWAASMIGSSAPNSRL HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RSFEKDIEAGKLLLMVDVPRGRVEEVEALLQKAHPEASFAGLDPAVPAFP HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA