| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is parA
Identifier: 94314738
GI number: 94314738
Start: 2768
End: 3424
Strand: Direct
Name: parA
Synonym: Rmet_5819
Alternate gene names: NA
Gene position: 2768-3424 (Clockwise)
Preceding gene: 94314736
Following gene: 94314739
Centisome position: 0.11
GC content: 59.97
Gene sequence:
>657_bases GTGGCAGCAAAGATCATCACCGTTTTCAACCAAAAGGGCGGCTGCGGCAAGACCACAGTCAGTATGCATATCGCTGGCAC GCTTGGACTCCGCGGTGCCCGGTCGCTGTTGGTGGATATGGATGAGCAAGGCACTGCTACGCGCTGGGCTGCGCAAGCTA GCGACGAACGCCCATTTCCGGCCTCAGTGATCGGATTGGCTCCATCGGGAGGCGCCATGCACCGGGAAGTGCGCAAGTTC GTCAACGATTACGACTACATCCTTGTCGATTGCCCGCCTGCCGTCCATTCTGCAGCCCCATCGAGCGCCTTGCTGATCTC CGATCTGGCAATCATCCCGGTCGTGCCGTCGCCGCCAGACCTCTGGGCAGCCGTTGCCGCCAAAACATTGGCGCAGCACG CCCAGGTACAGAATGAAACGCTTCAGATCCGTGTGATGGCGAACATGGTCCAGCGCCGCGTGTCTATTGCGCGTCAGGCC ATCGAGATCCTCGGTGATGACGGCGATGTTCCGCTGTTGAACGCAATGGTCGGTTCGCGATCGGCCTTTCGAGAGTGCCA AGCCATTGGCTGCACGGTGCATGGCGTGCCGGGAGCACGCGAGGCCGTGCAGGAAGTCGACATGATGGTGGACGAAATCT TGTCCCTGATTGAGTAA
Upstream 100 bases:
>100_bases ATTTTTGAAAAACGGGTTGTAGCGGAATGTCTATTTGGCTAAAGTGACGCCTTAACTGAATACCATCATTCGCGCTTTCA GCGCTGAAAGTGAGGCCGTA
Downstream 100 bases:
>100_bases TACCTATGGCAACGAAATTGAAGAGTCTCAAGGCGGGGATGCTCGCCGGCATGGCCGCAGAAAAGACCCGCAGCGACGCG ATCGACCGGTTCGCGCGTGC
Product: ATPase involved in plasmid partitioning
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; Plasmid Partitioning Protein; Plasmid Partition Protein ParA; ParA Family Protein; Partition Protein A; Plasmid Partition Protein ParA-Like Protein; Chromosome Partitioning ATPase; ParA-Like Protein; Plasmid Partitioning Protein F; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partition Protein; ParA Partitioning Protein; Partitioning Protein; Partitioning Protein ParA; Plasmid Partitioning Protein ParA; Plasmid Partition ATPase; Chromosome Partitioning; ParA Protein; ParA Partitioning-Like Protein; Chromosome Partitioning Protein ParA; PARA Protein; Plasmid Stability Protein ParA; ParA Plasmid Partitioning Protein; Chmomosome Partition Protein A; Chromosome Partition Protein ParA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAAKIITVFNQKGGCGKTTVSMHIAGTLGLRGARSLLVDMDEQGTATRWAAQASDERPFPASVIGLAPSGGAMHREVRKF VNDYDYILVDCPPAVHSAAPSSALLISDLAIIPVVPSPPDLWAAVAAKTLAQHAQVQNETLQIRVMANMVQRRVSIARQA IEILGDDGDVPLLNAMVGSRSAFRECQAIGCTVHGVPGAREAVQEVDMMVDEILSLIE
Sequences:
>Translated_218_residues MAAKIITVFNQKGGCGKTTVSMHIAGTLGLRGARSLLVDMDEQGTATRWAAQASDERPFPASVIGLAPSGGAMHREVRKF VNDYDYILVDCPPAVHSAAPSSALLISDLAIIPVVPSPPDLWAAVAAKTLAQHAQVQNETLQIRVMANMVQRRVSIARQA IEILGDDGDVPLLNAMVGSRSAFRECQAIGCTVHGVPGAREAVQEVDMMVDEILSLIE >Mature_217_residues AAKIITVFNQKGGCGKTTVSMHIAGTLGLRGARSLLVDMDEQGTATRWAAQASDERPFPASVIGLAPSGGAMHREVRKFV NDYDYILVDCPPAVHSAAPSSALLISDLAIIPVVPSPPDLWAAVAAKTLAQHAQVQNETLQIRVMANMVQRRVSIARQAI EILGDDGDVPLLNAMVGSRSAFRECQAIGCTVHGVPGAREAVQEVDMMVDEILSLIE
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23165; Mature: 23034
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKIITVFNQKGGCGKTTVSMHIAGTLGLRGARSLLVDMDEQGTATRWAAQASDERPFP CCCEEEEEECCCCCCCCEEEEEEEEEHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCC ASVIGLAPSGGAMHREVRKFVNDYDYILVDCPPAVHSAAPSSALLISDLAIIPVVPSPPD CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHEECCCEEEECCCCCHH LWAAVAAKTLAQHAQVQNETLQIRVMANMVQRRVSIARQAIEILGDDGDVPLLNAMVGSR HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH SAFRECQAIGCTVHGVPGAREAVQEVDMMVDEILSLIE HHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAKIITVFNQKGGCGKTTVSMHIAGTLGLRGARSLLVDMDEQGTATRWAAQASDERPFP CCEEEEEECCCCCCCCEEEEEEEEEHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCC ASVIGLAPSGGAMHREVRKFVNDYDYILVDCPPAVHSAAPSSALLISDLAIIPVVPSPPD CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHEECCCEEEECCCCCHH LWAAVAAKTLAQHAQVQNETLQIRVMANMVQRRVSIARQAIEILGDDGDVPLLNAMVGSR HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH SAFRECQAIGCTVHGVPGAREAVQEVDMMVDEILSLIE HHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA