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The map label for this gene is parB [H]

Identifier: 94314739

GI number: 94314739

Start: 3430

End: 4446

Strand: Direct

Name: parB [H]

Synonym: Rmet_5820

Alternate gene names: 94314739

Gene position: 3430-4446 (Clockwise)

Preceding gene: 94314738

Following gene: 94314741

Centisome position: 0.13

GC content: 61.65

Gene sequence:

>1017_bases
ATGGCAACGAAATTGAAGAGTCTCAAGGCGGGGATGCTCGCCGGCATGGCCGCAGAAAAGACCCGCAGCGACGCGATCGA
CCGGTTCGCGCGTGCGGAGGCGGCCATTTCCCAGCATCCAAATGGGCTGTTGCAGTCGGCGCGCGCAATCCCGCCGCAAT
CGACTTTCAGCGCTGAAAGTGATGAGAGCGTGATCGAAGGGCGGACGCTGATAAAGATTCCCATCGCCCAGCTGCATGAC
AACCCCTTCAATGCCCGCCGCATCTACGATCCGGCGGTTGTGCAGGAGCGCGCGGCGTCGATTGCCACGCATGGTCAAAA
GACGCCGGGTCTGGCTGCGTCCGACCCGACCCGTCCCGGCCACTACATCCTGATCGACGGTCACTACCGCAAGCGCGCAC
TGGCGTCAGCGGGCAAGCTCGAGATGGAATGCTTCATCGAGACCGACCTGAGCGATCTCGATTTCTATCGCCTTTCCTTC
CTGCTCAACGAGCAGCGGTCGGACCAGTCCGCACTCGACAACGCGATCGCCTGGCGCCAGTTGCTCGATGAGGGCAAGGT
TCAGAAGGAGGACGAAATCTGCGAACTGACCGGAATGTCGGCCGGCACCGTCAACAAGACACTGGCCTTGCTCAAGCTGC
CCGAGTCCGTTCTGGCGGTTATGCGCGAACGTCCGAGCGCGATCGGGATTGCTACCGGCTACGAGCTGACGCTGTACTGC
AAGGTTGCCGGCGAAGACCGCACGCGCGATCTGGCCACGCGCATCATGAACGACGGCATGTCCAGCCGCGAGGTCGAAGC
GATTCGCAAGCAGGCCCAGGAAGGGAAGTCCCGCAAGGTCAAGGAGATCAGCCGCCAGTACAAGATTCGGACAGAATCGG
GCCAGCTACTCGGGACGATCAAAGAGTGGGACTCCGGCCGTGTCATGCTTGATGTTCAACTCACCGACCGCAGTGCCCGG
GAAGACCTGCTGGACGTCCTCAAGGCCCGCTTCGGGTTGGACAAGACGCTGATCTGA

Upstream 100 bases:

>100_bases
CCATTGGCTGCACGGTGCATGGCGTGCCGGGAGCACGCGAGGCCGTGCAGGAAGTCGACATGATGGTGGACGAAATCTTG
TCCCTGATTGAGTAATACCT

Downstream 100 bases:

>100_bases
GCATCTTCCAACCATGAGGATCCATTGCGATCCAATCGGGTGACGAAACTGCTCTATTGGATCGCAATCACCCCAACCGC
AACTGCCTCGGCGTGAAGGC

Product: plasmid partition protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MATKLKSLKAGMLAGMAAEKTRSDAIDRFARAEAAISQHPNGLLQSARAIPPQSTFSAESDESVIEGRTLIKIPIAQLHD
NPFNARRIYDPAVVQERAASIATHGQKTPGLAASDPTRPGHYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSF
LLNEQRSDQSALDNAIAWRQLLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIATGYELTLYC
KVAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRTESGQLLGTIKEWDSGRVMLDVQLTDRSAR
EDLLDVLKARFGLDKTLI

Sequences:

>Translated_338_residues
MATKLKSLKAGMLAGMAAEKTRSDAIDRFARAEAAISQHPNGLLQSARAIPPQSTFSAESDESVIEGRTLIKIPIAQLHD
NPFNARRIYDPAVVQERAASIATHGQKTPGLAASDPTRPGHYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSF
LLNEQRSDQSALDNAIAWRQLLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIATGYELTLYC
KVAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRTESGQLLGTIKEWDSGRVMLDVQLTDRSAR
EDLLDVLKARFGLDKTLI
>Mature_337_residues
ATKLKSLKAGMLAGMAAEKTRSDAIDRFARAEAAISQHPNGLLQSARAIPPQSTFSAESDESVIEGRTLIKIPIAQLHDN
PFNARRIYDPAVVQERAASIATHGQKTPGLAASDPTRPGHYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSFL
LNEQRSDQSALDNAIAWRQLLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIATGYELTLYCK
VAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRTESGQLLGTIKEWDSGRVMLDVQLTDRSARE
DLLDVLKARFGLDKTLI

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009362
- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF06250 DUF1016; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 37430; Mature: 37299

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLKSLKAGMLAGMAAEKTRSDAIDRFARAEAAISQHPNGLLQSARAIPPQSTFSAES
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
DESVIEGRTLIKIPIAQLHDNPFNARRIYDPAVVQERAASIATHGQKTPGLAASDPTRPG
CCHHHCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSFLLNEQRSDQSALDNAIAWRQ
CEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIATGYELTLYC
HHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEEE
KVAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRTESGQLLGTI
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCEEEEH
KEWDSGRVMLDVQLTDRSAREDLLDVLKARFGLDKTLI
EECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATKLKSLKAGMLAGMAAEKTRSDAIDRFARAEAAISQHPNGLLQSARAIPPQSTFSAES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
DESVIEGRTLIKIPIAQLHDNPFNARRIYDPAVVQERAASIATHGQKTPGLAASDPTRPG
CCHHHCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSFLLNEQRSDQSALDNAIAWRQ
CEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIATGYELTLYC
HHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEEE
KVAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRTESGQLLGTI
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCEEEEH
KEWDSGRVMLDVQLTDRSAREDLLDVLKARFGLDKTLI
EECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA