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The map label for this gene is 94314697

Identifier: 94314697

GI number: 94314697

Start: 2537702

End: 2538778

Strand: Direct

Name: 94314697

Synonym: Rmet_5778

Alternate gene names: NA

Gene position: 2537702-2538778 (Clockwise)

Preceding gene: 94314694

Following gene: 94314698

Centisome position: 98.36

GC content: 66.11

Gene sequence:

>1077_bases
ATGAAGAAGTCAGCCAGCCTCTGGCTGCTTGCCGCCACCGTCGTGCCCGGCACCACTTACGCCGAATCCGGTGTGAACCT
GTACGGCATCGTCAGTTCGGCGGTGCGCTATACCTCGAACCTCGATGGCCGGCATCATGACCAGGTCGCGCTCGTATCGG
GCGGCATGGTAGGCAGCCGCTTCGGCCTGCGGGGCTCCGAGGACCTTGGGGGCGGCAACAGGGCCATCTTCCAGCTCGAG
GCCGGCATCGGCAGCGACGATGGCCGCGCGGCCTACAACGCATTTTTCGGCCGCCAGGCCTGGGCCGGTCTCTCCGGCAA
CTGGGGCAGTCTGACCTTCGGGCGCCAGTACAACGCGCTCAACAACATCGGCTGGGCGTTCAATCCGCTCGATCAGGGCT
GGGGCAACTTCTGGTCCGACCCGCTGTACGTCGGCGGCGACATCTTCTTCCAGGACTACCGCATCAACAACAGCGTGGTC
TATCAAAACACGGTCGGCCCGTTCTCCGTCCAGCTCGACTACGGCGCGGGCGAGCAACCCGGCAACCAGAGCCGCGGCAC
CACGCTCGGCGGCGGCGTGAAATACCAGCAGGGACCGCTGGCGCTGGGCGTAGCCTACGACCAGCGCAGCAGCACCGATG
GCACGAACACGATCCGCAATTACTCGGTGGGCGGGTCCTACGCGTTCGGCAAGGCCACGGCCTACCTGGGCCACATGGGA
CGTCGCGAAACAGCCAGCGATGCCTCATTCGCCACCTCGTTCATCGGCCTCGGCTATCAGCTCACCCCTGCGCTGCATCT
GTCTGGCGCCTATTACCGCTACCAGCAACGCGGGGCCGTGACCACGCAGTTCCAGGAGACACCCATCCTGCTGGGCAGCG
GCAACGCCGACAGCGTCGCCCTGGTCGGCGACTACGCGCTCTCCAAGCGCACCAGCCTGTACGTAGAGGCCGATGTCGTC
TACGCGCGCGGCGGCACCGTCGGCCGCGAGACCGAGTATTGGGCTGGCACGCCGGTGACCGACATCGACAGCACCACACG
CGTGGGCGTCATGGTCGGCATGCGCCATCAGTTCTGA

Upstream 100 bases:

>100_bases
GACCGCCGCACGGGACTGGAACCCCCCAGGCAACTGCCTGGCCGGTCTGCCCCTGGACGCGCTCTTGCGCCGGGCGGGAC
CGAATTCCGGAGGACAATCC

Downstream 100 bases:

>100_bases
GCATCCGGCTGGTTTCCATTGGTCCCTTGGGGGGTCCCTAGGGCTTTGGACCAATGGAGACCATACAGCGGCAGAGATAA
AGTGGATCGAGCACAACGGA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKKSASLWLLAATVVPGTTYAESGVNLYGIVSSAVRYTSNLDGRHHDQVALVSGGMVGSRFGLRGSEDLGGGNRAIFQLE
AGIGSDDGRAAYNAFFGRQAWAGLSGNWGSLTFGRQYNALNNIGWAFNPLDQGWGNFWSDPLYVGGDIFFQDYRINNSVV
YQNTVGPFSVQLDYGAGEQPGNQSRGTTLGGGVKYQQGPLALGVAYDQRSSTDGTNTIRNYSVGGSYAFGKATAYLGHMG
RRETASDASFATSFIGLGYQLTPALHLSGAYYRYQQRGAVTTQFQETPILLGSGNADSVALVGDYALSKRTSLYVEADVV
YARGGTVGRETEYWAGTPVTDIDSTTRVGVMVGMRHQF

Sequences:

>Translated_358_residues
MKKSASLWLLAATVVPGTTYAESGVNLYGIVSSAVRYTSNLDGRHHDQVALVSGGMVGSRFGLRGSEDLGGGNRAIFQLE
AGIGSDDGRAAYNAFFGRQAWAGLSGNWGSLTFGRQYNALNNIGWAFNPLDQGWGNFWSDPLYVGGDIFFQDYRINNSVV
YQNTVGPFSVQLDYGAGEQPGNQSRGTTLGGGVKYQQGPLALGVAYDQRSSTDGTNTIRNYSVGGSYAFGKATAYLGHMG
RRETASDASFATSFIGLGYQLTPALHLSGAYYRYQQRGAVTTQFQETPILLGSGNADSVALVGDYALSKRTSLYVEADVV
YARGGTVGRETEYWAGTPVTDIDSTTRVGVMVGMRHQF
>Mature_358_residues
MKKSASLWLLAATVVPGTTYAESGVNLYGIVSSAVRYTSNLDGRHHDQVALVSGGMVGSRFGLRGSEDLGGGNRAIFQLE
AGIGSDDGRAAYNAFFGRQAWAGLSGNWGSLTFGRQYNALNNIGWAFNPLDQGWGNFWSDPLYVGGDIFFQDYRINNSVV
YQNTVGPFSVQLDYGAGEQPGNQSRGTTLGGGVKYQQGPLALGVAYDQRSSTDGTNTIRNYSVGGSYAFGKATAYLGHMG
RRETASDASFATSFIGLGYQLTPALHLSGAYYRYQQRGAVTTQFQETPILLGSGNADSVALVGDYALSKRTSLYVEADVV
YARGGTVGRETEYWAGTPVTDIDSTTRVGVMVGMRHQF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38320; Mature: 38320

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSASLWLLAATVVPGTTYAESGVNLYGIVSSAVRYTSNLDGRHHDQVALVSGGMVGSR
CCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCEECC
FGLRGSEDLGGGNRAIFQLEAGIGSDDGRAAYNAFFGRQAWAGLSGNWGSLTFGRQYNAL
CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCCCEEECCCCCCH
NNIGWAFNPLDQGWGNFWSDPLYVGGDIFFQDYRINNSVVYQNTVGPFSVQLDYGAGEQP
HCCCCEECCHHHCCCHHCCCCEEECCEEEEEEEEECCEEEEEECCCCEEEEEECCCCCCC
GNQSRGTTLGGGVKYQQGPLALGVAYDQRSSTDGTNTIRNYSVGGSYAFGKATAYLGHMG
CCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCC
RRETASDASFATSFIGLGYQLTPALHLSGAYYRYQQRGAVTTQFQETPILLGSGNADSVA
CCCCCCCHHHHHHHHHCCEEECCEEEECCCEEEEECCCCEEEEECCCCEEEECCCCCCEE
LVGDYALSKRTSLYVEADVVYARGGTVGRETEYWAGTPVTDIDSTTRVGVMVGMRHQF
EEECCHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKKSASLWLLAATVVPGTTYAESGVNLYGIVSSAVRYTSNLDGRHHDQVALVSGGMVGSR
CCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCEECC
FGLRGSEDLGGGNRAIFQLEAGIGSDDGRAAYNAFFGRQAWAGLSGNWGSLTFGRQYNAL
CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCCCEEECCCCCCH
NNIGWAFNPLDQGWGNFWSDPLYVGGDIFFQDYRINNSVVYQNTVGPFSVQLDYGAGEQP
HCCCCEECCHHHCCCHHCCCCEEECCEEEEEEEEECCEEEEEECCCCEEEEEECCCCCCC
GNQSRGTTLGGGVKYQQGPLALGVAYDQRSSTDGTNTIRNYSVGGSYAFGKATAYLGHMG
CCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCC
RRETASDASFATSFIGLGYQLTPALHLSGAYYRYQQRGAVTTQFQETPILLGSGNADSVA
CCCCCCCHHHHHHHHHCCEEECCEEEECCCEEEEECCCCEEEEECCCCEEEECCCCCCEE
LVGDYALSKRTSLYVEADVVYARGGTVGRETEYWAGTPVTDIDSTTRVGVMVGMRHQF
EEECCHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]