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The map label for this gene is yigB [H]

Identifier: 94314694

GI number: 94314694

Start: 2535061

End: 2535768

Strand: Direct

Name: yigB [H]

Synonym: Rmet_5775

Alternate gene names: 94314694

Gene position: 2535061-2535768 (Clockwise)

Preceding gene: 94314693

Following gene: 94314697

Centisome position: 98.25

GC content: 66.24

Gene sequence:

>708_bases
ATGCGTCTGGCCGGTATCTCCGCAATATCTCTCGATCTCGACGACACCCTTTGGGCTTTCGAACCTGCCGTCGTGCGCGC
GGAACAGGTCCTGCATGACTGGTTGCTGCAGCAAGCGCCCAAATCCGCACCGATCCTTTCATCGCCCCAGGTGCTGCGTG
ACCTCCGCGTCCAGTTCGAGGCCATGCGCCCCGAACTGGCTGGCAACATGCGCGCGCTGCGGCTGGGCTCGATCCGGCTG
GTGCTCGACATGTCGAACGAAGACCCCGGCCTTGCCGAGGCCGCCTACGACGCTTTCTACGCTGCGCGCCAGCAGGTCGA
TTTCTTCGACGATGCGCTGCCCGCGCTGGAATGGCTGAGCCAGCGGTTTCCACTCGTCGCGGTATCGAATGGCAATGCGA
ATCTCAAGCTGACTGGCGGGCACCAGTTCTTCCGGGCATCGCTGAACCCGCAGAGCTTCGGCAGCGGCAAACCCGGCGCC
GCGATTTTCCACGCGGCAGCCGATGCAGCCGGATGCGCGCCCGGCCGAATGCTTCACGTCGGTGACGATCCCGACCTCGA
CGTAGCCGGCGCGATCGCCGCCGGCGCACAGGCCGCATGGGTGGTGCGCTCCGAAGAGGCGTCCGCCGCGCAATGGTCAC
GCAGCAGCCCGCCTCCGCACCTGATCGTTCGCGATCTGCGGGCGCTGTGTCAGGCACTGGACGCCTGA

Upstream 100 bases:

>100_bases
GAAGTGACCTTGCGGTCGACACGGCCTGCGGGGGCGATGCGAACGAAGATGGTAAATTCGGCGGAGTCCCCCGCAACTCC
GCTTTTTCACGTTCCCCACC

Downstream 100 bases:

>100_bases
AGCGCGTAGAGACGTTATCGAAAGAAAACGAAACGGCTCTTAGAGGAAGCGCTCCGCTTCGTCCAGCATATTGCGCACCG
GGACTATCGCACTGCGCTTC

Product: Haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRLAGISAISLDLDDTLWAFEPAVVRAEQVLHDWLLQQAPKSAPILSSPQVLRDLRVQFEAMRPELAGNMRALRLGSIRL
VLDMSNEDPGLAEAAYDAFYAARQQVDFFDDALPALEWLSQRFPLVAVSNGNANLKLTGGHQFFRASLNPQSFGSGKPGA
AIFHAAADAAGCAPGRMLHVGDDPDLDVAGAIAAGAQAAWVVRSEEASAAQWSRSSPPPHLIVRDLRALCQALDA

Sequences:

>Translated_235_residues
MRLAGISAISLDLDDTLWAFEPAVVRAEQVLHDWLLQQAPKSAPILSSPQVLRDLRVQFEAMRPELAGNMRALRLGSIRL
VLDMSNEDPGLAEAAYDAFYAARQQVDFFDDALPALEWLSQRFPLVAVSNGNANLKLTGGHQFFRASLNPQSFGSGKPGA
AIFHAAADAAGCAPGRMLHVGDDPDLDVAGAIAAGAQAAWVVRSEEASAAQWSRSSPPPHLIVRDLRALCQALDA
>Mature_235_residues
MRLAGISAISLDLDDTLWAFEPAVVRAEQVLHDWLLQQAPKSAPILSSPQVLRDLRVQFEAMRPELAGNMRALRLGSIRL
VLDMSNEDPGLAEAAYDAFYAARQQVDFFDDALPALEWLSQRFPLVAVSNGNANLKLTGGHQFFRASLNPQSFGSGKPGA
AIFHAAADAAGCAPGRMLHVGDDPDLDVAGAIAAGAQAAWVVRSEEASAAQWSRSSPPPHLIVRDLRALCQALDA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=234, Percent_Identity=33.7606837606838, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25205; Mature: 25205

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAGISAISLDLDDTLWAFEPAVVRAEQVLHDWLLQQAPKSAPILSSPQVLRDLRVQFE
CCCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AMRPELAGNMRALRLGSIRLVLDMSNEDPGLAEAAYDAFYAARQQVDFFDDALPALEWLS
HHCHHHHCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFPLVAVSNGNANLKLTGGHQFFRASLNPQSFGSGKPGAAIFHAAADAAGCAPGRMLHV
HCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCEEEC
GDDPDLDVAGAIAAGAQAAWVVRSEEASAAQWSRSSPPPHLIVRDLRALCQALDA
CCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLAGISAISLDLDDTLWAFEPAVVRAEQVLHDWLLQQAPKSAPILSSPQVLRDLRVQFE
CCCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AMRPELAGNMRALRLGSIRLVLDMSNEDPGLAEAAYDAFYAARQQVDFFDDALPALEWLS
HHCHHHHCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFPLVAVSNGNANLKLTGGHQFFRASLNPQSFGSGKPGAAIFHAAADAAGCAPGRMLHV
HCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCEEEC
GDDPDLDVAGAIAAGAQAAWVVRSEEASAAQWSRSSPPPHLIVRDLRALCQALDA
CCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]