Click here to switch to the map view.

The map label for this gene is yfeX [H]

Identifier: 94314491

GI number: 94314491

Start: 2325781

End: 2326728

Strand: Reverse

Name: yfeX [H]

Synonym: Rmet_5572

Alternate gene names: 94314491

Gene position: 2326728-2325781 (Counterclockwise)

Preceding gene: 94314492

Following gene: 94314490

Centisome position: 90.18

GC content: 63.19

Gene sequence:

>948_bases
ATGCCAAACGACCCGATCGAACCCCAGGCCGTCTATCAACCCATTACCCGCAGCGCGATCTTCATCGTCGCGACGCTGAC
GCCCGGTGCCGAGCACGCCGCGACCGTGCGTGCCTGGTGCGCGGATGTCGCAGCGCTCGTGCGGTCCGTCGGCAAACGTG
TGCCGGGCGGCAATCTGTCATGTGTCTGCGGCTTTGGCACCGACGCCTGGGATACGCTGTTCGGGGGCCCGCATCCCGCA
TCGCTACATGCATTCCGCGAGTTCGGCGCCGGCGATCGACGCGCCGTGGCCACGCGGGGCGATCTGCTGCTGCATATCCG
CGCGGAACATATGGATCTGTGCTTCGAACTCGCGACCCAGTTGATCGGCCGGCTCGGCGCGGCGGTGACCGTGGTCGACG
AAGTGCATGGCTTCCGCTACTTCGACATGCGCAGCATGGTGGGCTTTGTCGACGGCACTGAGAATCCGGTGGATCGCGAA
GCTGTGGATTTCACGATCATCGGTGACGAGGACCTATCGTTCGCAGGCGGCAGCTACGTGATCGTGCAGAAGTACCTGCA
TGACATGACCGGCTGGAACGAGCTTTCCGTCGAGGCGCAGGAGCGCATCATCGGGCGGACCAAGTTGTCCGACATCGAAC
TCGATGAGTCGATCAAGCCGACGTGCTCGCACAGCTCGCTGACGACGCTGGAAGAGGACGGCAAGGAAGTGAAGATCCTG
CGTGACAACATGCCGTTCGGCTCACCCGGCAAGGGCGAGTTTGGCACCTATTTCATCGGCTACGCGCGCTCGCCCGCGCC
GATCGAGCAGATGCTCGAGAACATGTTCGTCGGGCGTCCACCGGGCAATTACGACAGGCTGCTCGACTACAGCAAGGCAG
TCACCGGAAGCCTGTTCTTCGTGCCGTCTCAAGCGCTGCTCGAAGCGCTCGCGGAACGCAACCCATAG

Upstream 100 bases:

>100_bases
CCATGCCAAGGTGTGGCTTTCACAACTAGGGCACGTGTTCTAGTCTTGAAGACTGTCTCGCGCAGTCAGCGTCTGAAGCT
ATAACCATACTCACTCCCCC

Downstream 100 bases:

>100_bases
ACCACTGGCCTCGAAGCGGGGTTGCGGGCTGGGAAGTGGCCTGTCCTGCTTCTTCGATGGCATGGAGCCCGGCGCGGGCC
GCGACGATGATGATGGCCTC

Product: Dyp-type peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPNDPIEPQAVYQPITRSAIFIVATLTPGAEHAATVRAWCADVAALVRSVGKRVPGGNLSCVCGFGTDAWDTLFGGPHPA
SLHAFREFGAGDRRAVATRGDLLLHIRAEHMDLCFELATQLIGRLGAAVTVVDEVHGFRYFDMRSMVGFVDGTENPVDRE
AVDFTIIGDEDLSFAGGSYVIVQKYLHDMTGWNELSVEAQERIIGRTKLSDIELDESIKPTCSHSSLTTLEEDGKEVKIL
RDNMPFGSPGKGEFGTYFIGYARSPAPIEQMLENMFVGRPPGNYDRLLDYSKAVTGSLFFVPSQALLEALAERNP

Sequences:

>Translated_315_residues
MPNDPIEPQAVYQPITRSAIFIVATLTPGAEHAATVRAWCADVAALVRSVGKRVPGGNLSCVCGFGTDAWDTLFGGPHPA
SLHAFREFGAGDRRAVATRGDLLLHIRAEHMDLCFELATQLIGRLGAAVTVVDEVHGFRYFDMRSMVGFVDGTENPVDRE
AVDFTIIGDEDLSFAGGSYVIVQKYLHDMTGWNELSVEAQERIIGRTKLSDIELDESIKPTCSHSSLTTLEEDGKEVKIL
RDNMPFGSPGKGEFGTYFIGYARSPAPIEQMLENMFVGRPPGNYDRLLDYSKAVTGSLFFVPSQALLEALAERNP
>Mature_314_residues
PNDPIEPQAVYQPITRSAIFIVATLTPGAEHAATVRAWCADVAALVRSVGKRVPGGNLSCVCGFGTDAWDTLFGGPHPAS
LHAFREFGAGDRRAVATRGDLLLHIRAEHMDLCFELATQLIGRLGAAVTVVDEVHGFRYFDMRSMVGFVDGTENPVDREA
VDFTIIGDEDLSFAGGSYVIVQKYLHDMTGWNELSVEAQERIIGRTKLSDIELDESIKPTCSHSSLTTLEEDGKEVKILR
DNMPFGSPGKGEFGTYFIGYARSPAPIEQMLENMFVGRPPGNYDRLLDYSKAVTGSLFFVPSQALLEALAERNP

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=295, Percent_Identity=36.9491525423729, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 34416; Mature: 34285

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDPIEPQAVYQPITRSAIFIVATLTPGAEHAATVRAWCADVAALVRSVGKRVPGGNLS
CCCCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CVCGFGTDAWDTLFGGPHPASLHAFREFGAGDRRAVATRGDLLLHIRAEHMDLCFELATQ
EEEECCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHH
LIGRLGAAVTVVDEVHGFRYFDMRSMVGFVDGTENPVDREAVDFTIIGDEDLSFAGGSYV
HHHHHCCCEEEEHHHCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
IVQKYLHDMTGWNELSVEAQERIIGRTKLSDIELDESIKPTCSHSSLTTLEEDGKEVKIL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE
RDNMPFGSPGKGEFGTYFIGYARSPAPIEQMLENMFVGRPPGNYDRLLDYSKAVTGSLFF
ECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEE
VPSQALLEALAERNP
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
PNDPIEPQAVYQPITRSAIFIVATLTPGAEHAATVRAWCADVAALVRSVGKRVPGGNLS
CCCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CVCGFGTDAWDTLFGGPHPASLHAFREFGAGDRRAVATRGDLLLHIRAEHMDLCFELATQ
EEEECCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHH
LIGRLGAAVTVVDEVHGFRYFDMRSMVGFVDGTENPVDREAVDFTIIGDEDLSFAGGSYV
HHHHHCCCEEEEHHHCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
IVQKYLHDMTGWNELSVEAQERIIGRTKLSDIELDESIKPTCSHSSLTTLEEDGKEVKIL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE
RDNMPFGSPGKGEFGTYFIGYARSPAPIEQMLENMFVGRPPGNYDRLLDYSKAVTGSLFF
ECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEE
VPSQALLEALAERNP
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]