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The map label for this gene is etfB [H]

Identifier: 94314438

GI number: 94314438

Start: 2265995

End: 2266744

Strand: Reverse

Name: etfB [H]

Synonym: Rmet_5519

Alternate gene names: 94314438

Gene position: 2266744-2265995 (Counterclockwise)

Preceding gene: 94314439

Following gene: 94314437

Centisome position: 87.86

GC content: 63.33

Gene sequence:

>750_bases
GTGAAGATACTTGTCGCAGTCAAGCGAGTCGTGGACTCCAATGTCAAGGTCCGCGTGAAGTCGGATGGTACGGGTGTCGA
CCTGGCCAACGTCAAGATGAGCGTGAACCCGTTCGACGAAATCGCCGTCGAAGAGGCCGTGCGGTTGAAGGAAGCCGGCG
TCGTTACCGAGGTGGTTGCCGTGTCGTGCGGGGGGGCGCAATGCCAGGAAACCCTGCGTACCGCGATGGCCATCGGCGCC
GACCGCGGCATCCTGGTGGAGTCGAACGAAGACCTGCAGCCGCTGGCCGTGGCCAAGCTGCTCAAGGCCCTGATCGACAA
AGAACAGCCGGGCCTGGTGATTCTGGGCAAGCAGGCCATCGACGATGATTCGAACCAGACCGGCCAGATGGTGGCCGCGC
TGGCTGGCCTGCCGCAAGCCACGTTCGCCTCGAAGGTGGTGCTGGCCGACGGCAAGGCTTCGGTGACCCGTGAAGTGGAT
GGCGGTCTGGAAACCGTGTCGGTCAAGCTGCCGGCCGTGGTGACCACCGACCTGCGCCTGAACGAGCCGCGCTACGTTAC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTGGACACCGTCAAGCCGGAAGATCTCGGCGTCGACGTGAAGCCGC
GTCTGTCGACCGTGAAGGTCATCGAGCCCGCGAAGCGCAGTGCTGGCGTGATGGTCCCGGATGTGGCCACGCTGGTGCAG
AAGCTGAAGACGGAAGCCAAGGTTATCTGA

Upstream 100 bases:

>100_bases
CGGACGCGCGACGTTGAGCGCAGCATAACGGGCAGATTCCGTCGCTTCTCCTTCCATATCTGTGAAGGAGCTGGCAAACA
CCATAGACTAGGGTAGAGCA

Downstream 100 bases:

>100_bases
GCGCGGGGGAGATAGAACATGACTGCACTCGTCATTGCTGAACACGACAATCAATCGATCAAGGCCGCCACGCTGAACGC
CGTGACGGCTGCTGCCCAAT

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVAVKRVVDSNVKVRVKSDGTGVDLANVKMSVNPFDEIAVEEAVRLKEAGVVTEVVAVSCGGAQCQETLRTAMAIGA
DRGILVESNEDLQPLAVAKLLKALIDKEQPGLVILGKQAIDDDSNQTGQMVAALAGLPQATFASKVVLADGKASVTREVD
GGLETVSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLDTVKPEDLGVDVKPRLSTVKVIEPAKRSAGVMVPDVATLVQ
KLKTEAKVI

Sequences:

>Translated_249_residues
MKILVAVKRVVDSNVKVRVKSDGTGVDLANVKMSVNPFDEIAVEEAVRLKEAGVVTEVVAVSCGGAQCQETLRTAMAIGA
DRGILVESNEDLQPLAVAKLLKALIDKEQPGLVILGKQAIDDDSNQTGQMVAALAGLPQATFASKVVLADGKASVTREVD
GGLETVSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLDTVKPEDLGVDVKPRLSTVKVIEPAKRSAGVMVPDVATLVQ
KLKTEAKVI
>Mature_249_residues
MKILVAVKRVVDSNVKVRVKSDGTGVDLANVKMSVNPFDEIAVEEAVRLKEAGVVTEVVAVSCGGAQCQETLRTAMAIGA
DRGILVESNEDLQPLAVAKLLKALIDKEQPGLVILGKQAIDDDSNQTGQMVAALAGLPQATFASKVVLADGKASVTREVD
GGLETVSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLDTVKPEDLGVDVKPRLSTVKVIEPAKRSAGVMVPDVATLVQ
KLKTEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=62.753036437247, Blast_Score=291, Evalue=4e-79,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=61.1814345991561, Blast_Score=270, Evalue=7e-73,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=26.4069264069264, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.9407114624506, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6321646, Length=259, Percent_Identity=50.1930501930502, Blast_Score=228, Evalue=9e-61,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=58.9430894308943, Blast_Score=256, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=58.9430894308943, Blast_Score=256, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26350; Mature: 26350

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVAVKRVVDSNVKVRVKSDGTGVDLANVKMSVNPFDEIAVEEAVRLKEAGVVTEVVA
CHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHEE
VSCGGAQCQETLRTAMAIGADRGILVESNEDLQPLAVAKLLKALIDKEQPGLVILGKQAI
ECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMVAALAGLPQATFASKVVLADGKASVTREVDGGLETVSVKLPAVVTTDLRL
CCCCCCHHHHHHHHHCCCCHHHHCEEEEECCCCCEEEECCCCEEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLDTVKPEDLGVDVKPRLSTVKVIEPAKRSAGVMVPDVATLVQ
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCEECCCHHHHHH
KLKTEAKVI
HHHHHHCCC
>Mature Secondary Structure
MKILVAVKRVVDSNVKVRVKSDGTGVDLANVKMSVNPFDEIAVEEAVRLKEAGVVTEVVA
CHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHEE
VSCGGAQCQETLRTAMAIGADRGILVESNEDLQPLAVAKLLKALIDKEQPGLVILGKQAI
ECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMVAALAGLPQATFASKVVLADGKASVTREVDGGLETVSVKLPAVVTTDLRL
CCCCCCHHHHHHHHHCCCCHHHHCEEEEECCCCCEEEECCCCEEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLDTVKPEDLGVDVKPRLSTVKVIEPAKRSAGVMVPDVATLVQ
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCEECCCHHHHHH
KLKTEAKVI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]