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The map label for this gene is yjcS [H]

Identifier: 94314334

GI number: 94314334

Start: 2158500

End: 2160488

Strand: Direct

Name: yjcS [H]

Synonym: Rmet_5415

Alternate gene names: 94314334

Gene position: 2158500-2160488 (Clockwise)

Preceding gene: 94314333

Following gene: 94314335

Centisome position: 83.66

GC content: 64.61

Gene sequence:

>1989_bases
ATGCAATGCAAGACCGCCGCGTTTCACGCGGCCATTTCCGTGCTGGTGGGCAGCCTGTTCCCGATGAGCGCCATGGCCGC
GCCCACCGAGTCCATTGCCACCAACGACGCAACGGCCGCCACGCGCGATGCCAATGCGGACGTCCTGAAGCGCCTGCCTT
TCGCCAACCGGCAGGACTTCGAAGATGCCCAACGTGGCTGGGTCGGATCGCTCGACAGTGGCGAGATCCGCAATGCCGAT
GGTCGCGTGGTCTGGAACCTCGACGCCTATGCCTTCCTGCGTGACGATGCCTCACCCGCCTCGGTCAATCCGAGCCTCTG
GCGCCAGGCGCAGCTCAACCTGAAGCACGGCCTGTTCAAGGTCACCGACCGCATCTATCAGGTACGTGGCTTCGACCTCT
CGAACATGACCATCGTCGAGGGCGACAGTGGCCTTATCGTGATCGATCCGCTCCTGACCGCCGAAACCGCCCGCGCGGCG
ATCGACGTCTACTACAAGTACCGTCCGAAGAAGCCCATCGTCGCGGTGATCTACTCACACAGCCACGTGGACCACTTCGG
CGGCGTGAAGGGCGTGGTCAGTCAGGATGACGTCAAGTCGGGCAAGGTGAAGATCTACGCGCCCGAAGGCTTTATGGAAG
AGGCCATCAGCGAGAACATCTTCGCCGGCAATGCCATGAGCCGCCGCGCGCAGTACATGTACGGCGCCCTGCTGCCAAAG
GGCCCGCAGGGGCAGGTGGACGCCGGCCTCGGCAAGACCGTTTCGCTCGGCACGATCACACTGATTCCGCCCACCGACCT
GATCGGCAAGACCGGCGAAACCCGCACGATCGACGGCGTGCGGATCGAATTCCAGATGGCTCCCGGCTCCGAGGCGCCGG
CCGAGATGCTGATGTACTTCCCGCAGTGGCGGGCACTGTGCGCGGCAGAGGACGCCACGCATAACCTGCACAACCTCTAC
ACCATCCGCGGCGCCCAGGTGCGCGACGCCAACCAGTGGTGGCGCGCGCTCGACGAGACCATCGACCGCTACGGCAACCG
CACTGACGTCATCTTCGCGCAGCACCACTGGCCAAAGTGGGGCCAGCAGAGCATTACCGGCTTCCTCTCGCGGCAGCGCG
ACGCCTACAAGTTCATCCACGACCAGACACTGCGCCTGGCCAACCAGGGCTACACGATGACCGAGGTAGGCGAGCGCGTG
AAGCTGCCGCCGTCTCTGGCCAGCCAATGGGACCTTCGCGACTACTACGGCACGGTGAATCACAACGCCAAGGCCGTCTA
CCAGCGGTACCTCGGCTGGTACAGCGGTGACCCGGCCGACCTGCACCCGCTGCCACCGGAAGAGTCCGCGCAACGCTACG
TGCAGTACATGGGCGGCGCCGACAAGATCCTCGCTCAGGCCAGCAAGTCGTACGCCCAAGGCGATTACCGCTGGGTGGCG
CAGGTGGTCAAGCACGTGGTCTACGCCGATCCGTCGAACCTGGCGGCCCGCAAGCTCGAGGCCGACGCGCTTGAACAGCT
CGGCTACCAGACCGAGGCCGCAAGCTGGCGCAGTGCCTATCTGGTGGGCGCCTACGAGTTGCGCAATGGTGTGCCCAAGC
TGCAGGGCACCCAGACTGCCAGCCCAGACATGATCGGGGCCATGACCGACACGATGTTCCTGGACTTCCTGGCCGTGCGT
CTCAATGGCGAGCGCGCCGCCGGCCACGACCTGAAGTTCAACTGGGTACAACCCGATACTGGCAAGCGCTATGCGCTGTC
GGTGGAAAACGGTGTCTTCCTCTATAAGCCGGAGCGCCAGTTCGACGACGCCGGTGCCACGTTGACGATGCCGCGCAGCG
CGCTGATCGGCTCGCTGCTGGGCCAGACCACGCTGCCCGCGGAACTCTCGGCCGGGCGCGCCAAGGTGGACGGCGATCCG
GCTGTACTGAAGTCATGGATGGGAATGCTGGACAAGTTCGACCCGCAGTTCAATATCGTGACGCCTTGA

Upstream 100 bases:

>100_bases
GACTGGCAGGGCCGCGCTGCCGCCTGATTGCGCATCGCAACGCCGCATCACAAAAGCCAAATAGCAAACCCGCATAACAA
GAGCCCGAAAAGGAGACTCC

Downstream 100 bases:

>100_bases
TGCCGTCTGGCGTCTTCACCCGCTGAACCGTTACCCGGCACCCGGCCCTCCCCCAGGAGCCGGGTGGTGGCCCCTGCGCC
CGGCACCCGCGCAGGTCGAT

Product: putative alkyl sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MQCKTAAFHAAISVLVGSLFPMSAMAAPTESIATNDATAATRDANADVLKRLPFANRQDFEDAQRGWVGSLDSGEIRNAD
GRVVWNLDAYAFLRDDASPASVNPSLWRQAQLNLKHGLFKVTDRIYQVRGFDLSNMTIVEGDSGLIVIDPLLTAETARAA
IDVYYKYRPKKPIVAVIYSHSHVDHFGGVKGVVSQDDVKSGKVKIYAPEGFMEEAISENIFAGNAMSRRAQYMYGALLPK
GPQGQVDAGLGKTVSLGTITLIPPTDLIGKTGETRTIDGVRIEFQMAPGSEAPAEMLMYFPQWRALCAAEDATHNLHNLY
TIRGAQVRDANQWWRALDETIDRYGNRTDVIFAQHHWPKWGQQSITGFLSRQRDAYKFIHDQTLRLANQGYTMTEVGERV
KLPPSLASQWDLRDYYGTVNHNAKAVYQRYLGWYSGDPADLHPLPPEESAQRYVQYMGGADKILAQASKSYAQGDYRWVA
QVVKHVVYADPSNLAARKLEADALEQLGYQTEAASWRSAYLVGAYELRNGVPKLQGTQTASPDMIGAMTDTMFLDFLAVR
LNGERAAGHDLKFNWVQPDTGKRYALSVENGVFLYKPERQFDDAGATLTMPRSALIGSLLGQTTLPAELSAGRAKVDGDP
AVLKSWMGMLDKFDPQFNIVTP

Sequences:

>Translated_662_residues
MQCKTAAFHAAISVLVGSLFPMSAMAAPTESIATNDATAATRDANADVLKRLPFANRQDFEDAQRGWVGSLDSGEIRNAD
GRVVWNLDAYAFLRDDASPASVNPSLWRQAQLNLKHGLFKVTDRIYQVRGFDLSNMTIVEGDSGLIVIDPLLTAETARAA
IDVYYKYRPKKPIVAVIYSHSHVDHFGGVKGVVSQDDVKSGKVKIYAPEGFMEEAISENIFAGNAMSRRAQYMYGALLPK
GPQGQVDAGLGKTVSLGTITLIPPTDLIGKTGETRTIDGVRIEFQMAPGSEAPAEMLMYFPQWRALCAAEDATHNLHNLY
TIRGAQVRDANQWWRALDETIDRYGNRTDVIFAQHHWPKWGQQSITGFLSRQRDAYKFIHDQTLRLANQGYTMTEVGERV
KLPPSLASQWDLRDYYGTVNHNAKAVYQRYLGWYSGDPADLHPLPPEESAQRYVQYMGGADKILAQASKSYAQGDYRWVA
QVVKHVVYADPSNLAARKLEADALEQLGYQTEAASWRSAYLVGAYELRNGVPKLQGTQTASPDMIGAMTDTMFLDFLAVR
LNGERAAGHDLKFNWVQPDTGKRYALSVENGVFLYKPERQFDDAGATLTMPRSALIGSLLGQTTLPAELSAGRAKVDGDP
AVLKSWMGMLDKFDPQFNIVTP
>Mature_662_residues
MQCKTAAFHAAISVLVGSLFPMSAMAAPTESIATNDATAATRDANADVLKRLPFANRQDFEDAQRGWVGSLDSGEIRNAD
GRVVWNLDAYAFLRDDASPASVNPSLWRQAQLNLKHGLFKVTDRIYQVRGFDLSNMTIVEGDSGLIVIDPLLTAETARAA
IDVYYKYRPKKPIVAVIYSHSHVDHFGGVKGVVSQDDVKSGKVKIYAPEGFMEEAISENIFAGNAMSRRAQYMYGALLPK
GPQGQVDAGLGKTVSLGTITLIPPTDLIGKTGETRTIDGVRIEFQMAPGSEAPAEMLMYFPQWRALCAAEDATHNLHNLY
TIRGAQVRDANQWWRALDETIDRYGNRTDVIFAQHHWPKWGQQSITGFLSRQRDAYKFIHDQTLRLANQGYTMTEVGERV
KLPPSLASQWDLRDYYGTVNHNAKAVYQRYLGWYSGDPADLHPLPPEESAQRYVQYMGGADKILAQASKSYAQGDYRWVA
QVVKHVVYADPSNLAARKLEADALEQLGYQTEAASWRSAYLVGAYELRNGVPKLQGTQTASPDMIGAMTDTMFLDFLAVR
LNGERAAGHDLKFNWVQPDTGKRYALSVENGVFLYKPERQFDDAGATLTMPRSALIGSLLGQTTLPAELSAGRAKVDGDP
AVLKSWMGMLDKFDPQFNIVTP

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=626, Percent_Identity=51.1182108626198, Blast_Score=667, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6324409, Length=627, Percent_Identity=51.993620414673, Blast_Score=700, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 73254; Mature: 73254

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCKTAAFHAAISVLVGSLFPMSAMAAPTESIATNDATAATRDANADVLKRLPFANRQDF
CCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCH
EDAQRGWVGSLDSGEIRNADGRVVWNLDAYAFLRDDASPASVNPSLWRQAQLNLKHGLFK
HHHHCCCCCCCCCCCEECCCCCEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
VTDRIYQVRGFDLSNMTIVEGDSGLIVIDPLLTAETARAAIDVYYKYRPKKPIVAVIYSH
HHHHHHHHCCCCCCCEEEEECCCCEEEECCHHHHHHHHHEEEEEEEECCCCCEEEEEECC
SHVDHFGGVKGVVSQDDVKSGKVKIYAPEGFMEEAISENIFAGNAMSRRAQYMYGALLPK
CCCHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
GPQGQVDAGLGKTVSLGTITLIPPTDLIGKTGETRTIDGVRIEFQMAPGSEAPAEMLMYF
CCCCCCCCCCCCEEEEEEEEEECCHHHHCCCCCCEEECCEEEEEEECCCCCCHHHHHHHH
PQWRALCAAEDATHNLHNLYTIRGAQVRDANQWWRALDETIDRYGNRTDVIFAQHHWPKW
HHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
GQQSITGFLSRQRDAYKFIHDQTLRLANQGYTMTEVGERVKLPPSLASQWDLRDYYGTVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCHHHCCCCC
HNAKAVYQRYLGWYSGDPADLHPLPPEESAQRYVQYMGGADKILAQASKSYAQGDYRWVA
CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
QVVKHVVYADPSNLAARKLEADALEQLGYQTEAASWRSAYLVGAYELRNGVPKLQGTQTA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCC
SPDMIGAMTDTMFLDFLAVRLNGERAAGHDLKFNWVQPDTGKRYALSVENGVFLYKPERQ
CCCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCC
FDDAGATLTMPRSALIGSLLGQTTLPAELSAGRAKVDGDPAVLKSWMGMLDKFDPQFNIV
CCCCCCEEECCHHHHHHHHHCCCCCCCHHCCCCEECCCCHHHHHHHHHHHHHCCCCEEEE
TP
CC
>Mature Secondary Structure
MQCKTAAFHAAISVLVGSLFPMSAMAAPTESIATNDATAATRDANADVLKRLPFANRQDF
CCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCH
EDAQRGWVGSLDSGEIRNADGRVVWNLDAYAFLRDDASPASVNPSLWRQAQLNLKHGLFK
HHHHCCCCCCCCCCCEECCCCCEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
VTDRIYQVRGFDLSNMTIVEGDSGLIVIDPLLTAETARAAIDVYYKYRPKKPIVAVIYSH
HHHHHHHHCCCCCCCEEEEECCCCEEEECCHHHHHHHHHEEEEEEEECCCCCEEEEEECC
SHVDHFGGVKGVVSQDDVKSGKVKIYAPEGFMEEAISENIFAGNAMSRRAQYMYGALLPK
CCCHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
GPQGQVDAGLGKTVSLGTITLIPPTDLIGKTGETRTIDGVRIEFQMAPGSEAPAEMLMYF
CCCCCCCCCCCCEEEEEEEEEECCHHHHCCCCCCEEECCEEEEEEECCCCCCHHHHHHHH
PQWRALCAAEDATHNLHNLYTIRGAQVRDANQWWRALDETIDRYGNRTDVIFAQHHWPKW
HHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
GQQSITGFLSRQRDAYKFIHDQTLRLANQGYTMTEVGERVKLPPSLASQWDLRDYYGTVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCHHHCCCCC
HNAKAVYQRYLGWYSGDPADLHPLPPEESAQRYVQYMGGADKILAQASKSYAQGDYRWVA
CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
QVVKHVVYADPSNLAARKLEADALEQLGYQTEAASWRSAYLVGAYELRNGVPKLQGTQTA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCC
SPDMIGAMTDTMFLDFLAVRLNGERAAGHDLKFNWVQPDTGKRYALSVENGVFLYKPERQ
CCCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCC
FDDAGATLTMPRSALIGSLLGQTTLPAELSAGRAKVDGDPAVLKSWMGMLDKFDPQFNIV
CCCCCCEEECCHHHHHHHHHCCCCCCCHHCCCCEECCCCHHHHHHHHHHHHHCCCCEEEE
TP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]