| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314322
Identifier: 94314322
GI number: 94314322
Start: 2132781
End: 2134193
Strand: Reverse
Name: 94314322
Synonym: Rmet_5403
Alternate gene names: NA
Gene position: 2134193-2132781 (Counterclockwise)
Preceding gene: 94314331
Following gene: 291481569
Centisome position: 82.72
GC content: 62.63
Gene sequence:
>1413_bases ATGGCAGACATCCGCACCCTGGCAGAACGGCAGGCGATCGGACGTGAAGCACGCAGCCGCGCAAAGCGATCATCGAATGC CGAGATCGGCAACACCGACCGTGATCCGGTGGCGTTGCTGGAGCAGAACAGCGCGGGGCGCGTGGAGGCGCTGGTGCCGC TGCGCTATGGGCGCATGTCGGTGTCGCCATTCACGTTCTTTCGTGGCAGCGCGATTCTCCAGGCGCACGATCTTGCCGCC ACGGCAAATGCAGGCATCGCATTCCCAATCTGCGGCGACGCGCACCTGATGAACTTCGGGGGCTTCGCTACGCCGGAGCG GCAGCTTGTCTTCGATCTGAACGATTTTGACGAAGTGGCCGTGGGCCCCTGGGAGTGGGACGTCAAGCGCCTTGCCGGAA GCCTGGCCATTGCTGGCGAGCATATGGGTATCGCCCGGGACACCGTCAGCGACATCGTGGCGACGGCTGTGCACGAATAC CGCGATCGCATGGAGGAATACGCCGGGTATAGCGCGCTGGATCTCTGGAACGAGATTGTCTCGTTCGAACGCATGCTCGA AGCCGCGACGAGCGAAGAGGGCCGTCGAACGATTCTCAAGGCGAAGGAGAAGGCCGCAGGGCGGACCAACGAAAGCATGT TGAACAAGATGGCCGCGCAGCGTGACGGCCAATGGTGGATTCAGGACGCGCCGCCGGCGATCTTTCATCCCAGTGGCCCC ACTTCGCTGCTTGGTGAGCACGACCAATGGTCCAACACCGAGGCGTGGCGAGGCAAGCTGGCCCGCGCGTTCGACGGGTA TCTGAAAACGCTTCCCTCGGAGCGACGCGCACTGATCGATCACTTTTCCCTGCAGGACGTTGCCTTCAAGGTGGTAGGTG TTGGCAGTGTGGGTACCTTCTGCCTGGTGCTGTTGATGGTGGATAGCCACGAGCAGCCGCTGTTCCTGCAGGTCAAGGAA GCGAGGGACTCCGTGATCGCGCTTCACTATGACGCCGAAGGTCCGGCGCATCAGGGTCAGCGTGTCGTTTCGGGTCAGCG CCTGCTGCAGGCGGCCAGCGATGCGTTCCTTGGCTGGACGTCTGGCCCGGCCAATCGGCAGTTCTATTTCCGTCAGTTAC GCGACATGAAGGTATCGGCCGACGTCGAACGCATGAGCAACGGAGTACTGCAGGGATATGCGCGCTTCTGCGGTTGGGCG CTGGCGCGCGCGCACGCAAAGGCAAGCGGGAAGGCAGTGGAGATCGCGGCCTACCTGGGCAGCGGGGAGCGGTTCGCCGA TGCGATCACCGAATACTCGTTCGCCTGCGCCACTCAGAATCTGAAGGACTACGAGGCGTTCAAGCTCGCGTGTCGGACGG GCAAGATCGAAGCCCGCAGTGACGAAGACATGGCGGCGGATTTCCGCATGTAG
Upstream 100 bases:
>100_bases CACTAGATTTCCTCCGTATGCCCAGCCTTGCGTTCGGAAGGCTGGCATCCGATCCATTCACGCAGCAGCGTTCCGCATCC CACCTACAGGAGGCCCGAAA
Downstream 100 bases:
>100_bases CCGCCGCGTTTGAGACTAACGCGCGGCAAAAGGCCCCGGCGCTTTAGGCAAGCGCCGGGGCCTTTTTTGCATTACGGCGT GACGATATTGAACCAGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MADIRTLAERQAIGREARSRAKRSSNAEIGNTDRDPVALLEQNSAGRVEALVPLRYGRMSVSPFTFFRGSAILQAHDLAA TANAGIAFPICGDAHLMNFGGFATPERQLVFDLNDFDEVAVGPWEWDVKRLAGSLAIAGEHMGIARDTVSDIVATAVHEY RDRMEEYAGYSALDLWNEIVSFERMLEAATSEEGRRTILKAKEKAAGRTNESMLNKMAAQRDGQWWIQDAPPAIFHPSGP TSLLGEHDQWSNTEAWRGKLARAFDGYLKTLPSERRALIDHFSLQDVAFKVVGVGSVGTFCLVLLMVDSHEQPLFLQVKE ARDSVIALHYDAEGPAHQGQRVVSGQRLLQAASDAFLGWTSGPANRQFYFRQLRDMKVSADVERMSNGVLQGYARFCGWA LARAHAKASGKAVEIAAYLGSGERFADAITEYSFACATQNLKDYEAFKLACRTGKIEARSDEDMAADFRM
Sequences:
>Translated_470_residues MADIRTLAERQAIGREARSRAKRSSNAEIGNTDRDPVALLEQNSAGRVEALVPLRYGRMSVSPFTFFRGSAILQAHDLAA TANAGIAFPICGDAHLMNFGGFATPERQLVFDLNDFDEVAVGPWEWDVKRLAGSLAIAGEHMGIARDTVSDIVATAVHEY RDRMEEYAGYSALDLWNEIVSFERMLEAATSEEGRRTILKAKEKAAGRTNESMLNKMAAQRDGQWWIQDAPPAIFHPSGP TSLLGEHDQWSNTEAWRGKLARAFDGYLKTLPSERRALIDHFSLQDVAFKVVGVGSVGTFCLVLLMVDSHEQPLFLQVKE ARDSVIALHYDAEGPAHQGQRVVSGQRLLQAASDAFLGWTSGPANRQFYFRQLRDMKVSADVERMSNGVLQGYARFCGWA LARAHAKASGKAVEIAAYLGSGERFADAITEYSFACATQNLKDYEAFKLACRTGKIEARSDEDMAADFRM >Mature_469_residues ADIRTLAERQAIGREARSRAKRSSNAEIGNTDRDPVALLEQNSAGRVEALVPLRYGRMSVSPFTFFRGSAILQAHDLAAT ANAGIAFPICGDAHLMNFGGFATPERQLVFDLNDFDEVAVGPWEWDVKRLAGSLAIAGEHMGIARDTVSDIVATAVHEYR DRMEEYAGYSALDLWNEIVSFERMLEAATSEEGRRTILKAKEKAAGRTNESMLNKMAAQRDGQWWIQDAPPAIFHPSGPT SLLGEHDQWSNTEAWRGKLARAFDGYLKTLPSERRALIDHFSLQDVAFKVVGVGSVGTFCLVLLMVDSHEQPLFLQVKEA RDSVIALHYDAEGPAHQGQRVVSGQRLLQAASDAFLGWTSGPANRQFYFRQLRDMKVSADVERMSNGVLQGYARFCGWAL ARAHAKASGKAVEIAAYLGSGERFADAITEYSFACATQNLKDYEAFKLACRTGKIEARSDEDMAADFRM
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51898; Mature: 51767
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIRTLAERQAIGREARSRAKRSSNAEIGNTDRDPVALLEQNSAGRVEALVPLRYGRMS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEE VSPFTFFRGSAILQAHDLAATANAGIAFPICGDAHLMNFGGFATPERQLVFDLNDFDEVA CCCCCEECCCEEEEHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCCC VGPWEWDVKRLAGSLAIAGEHMGIARDTVSDIVATAVHEYRDRMEEYAGYSALDLWNEIV CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SFERMLEAATSEEGRRTILKAKEKAAGRTNESMLNKMAAQRDGQWWIQDAPPAIFHPSGP HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCC TSLLGEHDQWSNTEAWRGKLARAFDGYLKTLPSERRALIDHFSLQDVAFKVVGVGSVGTF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHEEEEECCCHHHH CLVLLMVDSHEQPLFLQVKEARDSVIALHYDAEGPAHQGQRVVSGQRLLQAASDAFLGWT HHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHEECC SGPANRQFYFRQLRDMKVSADVERMSNGVLQGYARFCGWALARAHAKASGKAVEIAAYLG CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC SGERFADAITEYSFACATQNLKDYEAFKLACRTGKIEARSDEDMAADFRM CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCC >Mature Secondary Structure ADIRTLAERQAIGREARSRAKRSSNAEIGNTDRDPVALLEQNSAGRVEALVPLRYGRMS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEE VSPFTFFRGSAILQAHDLAATANAGIAFPICGDAHLMNFGGFATPERQLVFDLNDFDEVA CCCCCEECCCEEEEHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCCC VGPWEWDVKRLAGSLAIAGEHMGIARDTVSDIVATAVHEYRDRMEEYAGYSALDLWNEIV CCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SFERMLEAATSEEGRRTILKAKEKAAGRTNESMLNKMAAQRDGQWWIQDAPPAIFHPSGP HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCC TSLLGEHDQWSNTEAWRGKLARAFDGYLKTLPSERRALIDHFSLQDVAFKVVGVGSVGTF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHEEEEECCCHHHH CLVLLMVDSHEQPLFLQVKEARDSVIALHYDAEGPAHQGQRVVSGQRLLQAASDAFLGWT HHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHEECC SGPANRQFYFRQLRDMKVSADVERMSNGVLQGYARFCGWALARAHAKASGKAVEIAAYLG CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC SGERFADAITEYSFACATQNLKDYEAFKLACRTGKIEARSDEDMAADFRM CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA