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The map label for this gene is 94314331

Identifier: 94314331

GI number: 94314331

Start: 2154520

End: 2155158

Strand: Reverse

Name: 94314331

Synonym: Rmet_5412

Alternate gene names: NA

Gene position: 2155158-2154520 (Counterclockwise)

Preceding gene: 94314339

Following gene: 94314322

Centisome position: 83.53

GC content: 63.22

Gene sequence:

>639_bases
ATGAGTGCAAACGAGACGGGCGACGTTGTCGCCATTCCGAATGGGACAACGAAATACCGCCGGGGCCTCGAGACCCGCAA
TCGCGTCATTGCGCTCACGAAGTCATTGATTTCCGAGCACGGCTATAGCGAAGTGACGCTCGATCAGATCTCTGCCCAGG
TCGGCGTGGCCAAGAGCAGCCTGCTTTGGCATTTCGGCAGCAAGGAAATGCTGCTTGCCGAGGCGGCGATCAGTCTGTTC
CAGGAAATCGAGCTTGCGCTGCGTCCCGACGATCTGGAGGGAAGGCCGCTGGCCGAGCGCGTCGACGAGATCTTTGACCG
GGTGGCCGACTATTTCACGCGCAATCCGGAAACCAAGGGGGTGGTGATGGCGCTGCTGTTCTCCGCCAACACCCCCCAGT
CCGTGCGCGAACATATCCGCGAAGGGTGGAACGGCCATGTCCGCGTGCTGGTAGAGGCGTTGGGCACGCCGGAGCGCCCG
CTTTCTCCCGACGCCGCCCGCCTGCTGGTGGCCATCTTCCACGGCGCGTACTGTCACTGGTACGCCAACGGCCGCACGCA
GCCGATTGGCGACTACCTGCACCCGGCACGGGACCTGTTCCTGAACTGGATCTCGGCGGAGAACGCATCCCGGCGTTGA

Upstream 100 bases:

>100_bases
CGGATCGGTGTCAAGCCAGGAAGGGGAAACCTAGGGCAAGTCCGGAGGACCGATATGACGCCGCTGCTACAATTTGCGGC
AAGCTGAATGGGTGAAGTCG

Downstream 100 bases:

>100_bases
GCGGGACGTCGCACCGTGTTCGCCACCTTCGCAATTTTCGGCGCCGCCTTGGTCCCCGGCACCTAGAACCCACTCTCGCG
AATCACGACGCTGTAGATGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSANETGDVVAIPNGTTKYRRGLETRNRVIALTKSLISEHGYSEVTLDQISAQVGVAKSSLLWHFGSKEMLLAEAAISLF
QEIELALRPDDLEGRPLAERVDEIFDRVADYFTRNPETKGVVMALLFSANTPQSVREHIREGWNGHVRVLVEALGTPERP
LSPDAARLLVAIFHGAYCHWYANGRTQPIGDYLHPARDLFLNWISAENASRR

Sequences:

>Translated_212_residues
MSANETGDVVAIPNGTTKYRRGLETRNRVIALTKSLISEHGYSEVTLDQISAQVGVAKSSLLWHFGSKEMLLAEAAISLF
QEIELALRPDDLEGRPLAERVDEIFDRVADYFTRNPETKGVVMALLFSANTPQSVREHIREGWNGHVRVLVEALGTPERP
LSPDAARLLVAIFHGAYCHWYANGRTQPIGDYLHPARDLFLNWISAENASRR
>Mature_211_residues
SANETGDVVAIPNGTTKYRRGLETRNRVIALTKSLISEHGYSEVTLDQISAQVGVAKSSLLWHFGSKEMLLAEAAISLFQ
EIELALRPDDLEGRPLAERVDEIFDRVADYFTRNPETKGVVMALLFSANTPQSVREHIREGWNGHVRVLVEALGTPERPL
SPDAARLLVAIFHGAYCHWYANGRTQPIGDYLHPARDLFLNWISAENASRR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23694; Mature: 23563

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANETGDVVAIPNGTTKYRRGLETRNRVIALTKSLISEHGYSEVTLDQISAQVGVAKSS
CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLWHFGSKEMLLAEAAISLFQEIELALRPDDLEGRPLAERVDEIFDRVADYFTRNPETKG
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
VVMALLFSANTPQSVREHIREGWNGHVRVLVEALGTPERPLSPDAARLLVAIFHGAYCHW
HHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
YANGRTQPIGDYLHPARDLFLNWISAENASRR
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SANETGDVVAIPNGTTKYRRGLETRNRVIALTKSLISEHGYSEVTLDQISAQVGVAKSS
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLWHFGSKEMLLAEAAISLFQEIELALRPDDLEGRPLAERVDEIFDRVADYFTRNPETKG
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
VVMALLFSANTPQSVREHIREGWNGHVRVLVEALGTPERPLSPDAARLLVAIFHGAYCHW
HHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
YANGRTQPIGDYLHPARDLFLNWISAENASRR
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA