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The map label for this gene is 94314320

Identifier: 94314320

GI number: 94314320

Start: 2129445

End: 2130260

Strand: Direct

Name: 94314320

Synonym: Rmet_5401

Alternate gene names: NA

Gene position: 2129445-2130260 (Clockwise)

Preceding gene: 94314319

Following gene: 94314321

Centisome position: 82.53

GC content: 67.89

Gene sequence:

>816_bases
ATGAACGAGCATCGACCGATACAGGAAGAGGAACTGCTGGCCTACGTCGACCACGCGCTCGACACCACGCGCCTGCGCGA
GATCGAGGCGTACCTGCAGCAGCATCCCGACGTCGCGACCCGCGTCGAGGGCTACATGGCGCAGCGCGATCAACTGCGCG
CCGCGCTCGCCCCGATCGCAGACGAACCGGTTCCGCCAGAACTGAACCTGCGGCACATGCTGACGGCTCGACGCGCCCGC
GCCAGCCATCCGTGGCGGCTGGCGGCTTCTGTCTTCGTCGCCATGTGCCTTGGTGGCATCGGCGGCTGGATGGGACGCGG
CGCGACCGAGCCGCCCACCGGCGGCATTGCCGCACTGGCGCGCGAAGCCACGGCGAGCTTCCAGGTATTTGCCGCCGACC
CGATACGTCCCGTCGAAATGGGGGCCGCTGACAGCAACGACCTGGTGAACTGGGTCTCCTCGCGGCTGCGTCGCCCGATT
GCCGTGCCGGACCTCGGCAAGGCAGGCTATCGCTACATCGGCGGGCGTCTCGTCGCCACCGAGCATGGTCCCGCCGGCCT
CTTCATGTACGAGGACGGCCACGGCACGCGCCTGGCGATGCTGGTACGCCCGATGGCAATCGAAGGCGACACACCGATGA
AGGCACACGTACAGGCCGGCGTGGCGGGATACTCATGGGCCAATCAGGGCCTTGGATACAGCCTGGTGGCGTCGGCGTCC
ACCAGCGGCCTCCACCCACTGGCCGACGAGATGCGCCGGCAGATCAATGGACGGGACGGGTCGGTAGACGCCGGCAGCAA
ACATCCCTCTCTGTAG

Upstream 100 bases:

>100_bases
GCACCGTGATGTCGCGCCTGTCTCGCGCGCGGGAAAAACTACTGAGGCAGATGGAACCCGGCCTGAAGGCGGCCCCGACA
TCCGGACTGCGGAGGGTCAA

Downstream 100 bases:

>100_bases
GGAACGGCACCACCAACTGCCGCTTGCCCCAAGGGCAATGCCTTTGCCCGTCACCCCAATGGCGTGCGGTCGATGCGCCA
TCAATACTGTTCACCGGGGC

Product: putative transmembrane transcriptional regulator (anti-sigma factor)

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Activator Of PrtI; Sigma Factor Regulator PrtR; Transmembrane Transcription Activator Of PrtI; Transmembrane Transcription Regulator

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNEHRPIQEEELLAYVDHALDTTRLREIEAYLQQHPDVATRVEGYMAQRDQLRAALAPIADEPVPPELNLRHMLTARRAR
ASHPWRLAASVFVAMCLGGIGGWMGRGATEPPTGGIAALAREATASFQVFAADPIRPVEMGAADSNDLVNWVSSRLRRPI
AVPDLGKAGYRYIGGRLVATEHGPAGLFMYEDGHGTRLAMLVRPMAIEGDTPMKAHVQAGVAGYSWANQGLGYSLVASAS
TSGLHPLADEMRRQINGRDGSVDAGSKHPSL

Sequences:

>Translated_271_residues
MNEHRPIQEEELLAYVDHALDTTRLREIEAYLQQHPDVATRVEGYMAQRDQLRAALAPIADEPVPPELNLRHMLTARRAR
ASHPWRLAASVFVAMCLGGIGGWMGRGATEPPTGGIAALAREATASFQVFAADPIRPVEMGAADSNDLVNWVSSRLRRPI
AVPDLGKAGYRYIGGRLVATEHGPAGLFMYEDGHGTRLAMLVRPMAIEGDTPMKAHVQAGVAGYSWANQGLGYSLVASAS
TSGLHPLADEMRRQINGRDGSVDAGSKHPSL
>Mature_271_residues
MNEHRPIQEEELLAYVDHALDTTRLREIEAYLQQHPDVATRVEGYMAQRDQLRAALAPIADEPVPPELNLRHMLTARRAR
ASHPWRLAASVFVAMCLGGIGGWMGRGATEPPTGGIAALAREATASFQVFAADPIRPVEMGAADSNDLVNWVSSRLRRPI
AVPDLGKAGYRYIGGRLVATEHGPAGLFMYEDGHGTRLAMLVRPMAIEGDTPMKAHVQAGVAGYSWANQGLGYSLVASAS
TSGLHPLADEMRRQINGRDGSVDAGSKHPSL

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29261; Mature: 29261

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEHRPIQEEELLAYVDHALDTTRLREIEAYLQQHPDVATRVEGYMAQRDQLRAALAPIA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
DEPVPPELNLRHMLTARRARASHPWRLAASVFVAMCLGGIGGWMGRGATEPPTGGIAALA
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
REATASFQVFAADPIRPVEMGAADSNDLVNWVSSRLRRPIAVPDLGKAGYRYIGGRLVAT
HHHHCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEE
EHGPAGLFMYEDGHGTRLAMLVRPMAIEGDTPMKAHVQAGVAGYSWANQGLGYSLVASAS
CCCCCEEEEEECCCCCEEEEEECCCEECCCCCHHHHHHHCCCCCCHHCCCCCEEEEECCC
TSGLHPLADEMRRQINGRDGSVDAGSKHPSL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNEHRPIQEEELLAYVDHALDTTRLREIEAYLQQHPDVATRVEGYMAQRDQLRAALAPIA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
DEPVPPELNLRHMLTARRARASHPWRLAASVFVAMCLGGIGGWMGRGATEPPTGGIAALA
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
REATASFQVFAADPIRPVEMGAADSNDLVNWVSSRLRRPIAVPDLGKAGYRYIGGRLVAT
HHHHCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEE
EHGPAGLFMYEDGHGTRLAMLVRPMAIEGDTPMKAHVQAGVAGYSWANQGLGYSLVASAS
CCCCCEEEEEECCCCCEEEEEECCCEECCCCCHHHHHHHCCCCCCHHCCCCCEEEEECCC
TSGLHPLADEMRRQINGRDGSVDAGSKHPSL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA