Click here to switch to the map view.

The map label for this gene is yjcS [H]

Identifier: 94314321

GI number: 94314321

Start: 2130727

End: 2132709

Strand: Direct

Name: yjcS [H]

Synonym: Rmet_5402

Alternate gene names: 94314321

Gene position: 2130727-2132709 (Clockwise)

Preceding gene: 94314320

Following gene: 94314323

Centisome position: 82.58

GC content: 61.57

Gene sequence:

>1983_bases
ATGAAGAACAGCCGATTTCGCGCGAGCGTCGTGACGCTCGTCTCCGCCGCGGTGCTCTCCCAGTTCGGCGCGGCCTATGC
CCAGGACGCGCGGAAGGACGCCACTAGCGCGACAAAGGCCGCCAACCAGAAGCTCCTCAGCGAATTGCCTTTCTCGGATC
GTTCCGATTTCGATGACGCGCACCGCGGCTTTGTCGCACCACTGCCGAACACGGTGATCAAGGGGTCGTCGGGTAACGCC
ATCTGGAACCCGAACCAGTACGCCTTTATCAAGGAAGGTTCCCAGGCACCGGGCACGGTCAACCCGAGCCTCTGGCGTCA
GGCTCAACTGATCAACATCAGCGGCCTGTTCCAGGTGACCGATGGCATCTATCAGGTTCGGAATCAGGACCTGTCGAACA
TGACCATCATCGAGGGCAAGGAAGGCATCACGGTGGTCGACCCCCTCGTCTCGGAAGAAACAGCCAAGGTCGCAATCGAT
CTCTACTATGCCAATCGTGGCCGCAAGCCCGTGAAGGCGGTGATCTACACACACAGCCACGTTGACCACTATGGCGGCGT
GCGTGGCGTGATCAGCCAGGACGACGTCACCTCCGGGAAGGTCAAGATCTACGCGCCTGAGGGCTTCCTGGAAGCCGCGG
TGGCGGAGAACGTGATGGCCGGCAATGCCATGAGCCGCCGCGCCAGCTACATGTACGGCAATCTGCTGCCCGCCGATGAA
AAGGGCCAGGTCGGCGCCGGTCTCGGCACCACGACCTCGGCCGGCACCGTCACGCTGTTGTCTCCGACGGACACGATCAC
CAAGACCGGTGAAAAGCGCGTCATCGACGGCCTGACCTACGAGTTCCTGATGGCTCCTGGCTCGGAAGCTCCGGCCGAGA
TGCTGTGGTACATCGAGGAAAAGCGCGCGATCTCCGCAGCCGAGGATTGCACACACACGCTGCACAACACGTATTCGCTG
CGCGGCGCCAAGATCCGCGAGCCGCTGCCCTGGTCGAAGTACCTGAATCAGGCGCTGACCATGTGGGGCGCCAAGGCAGA
TGTCATGTTCGCCCAGCACCACTGGCCGAGTTTCGGCCAGAAGAACGTGGTACACCTGCTGCGCCAGCAGCGCGACCTGT
ATCGCTACATCAATGACGAGACGCTGCGCCTGGCCAACCAGGGCGAGACGATGGTCGAGATCGCGGACAAGTTCAAGCTG
CCGCCCGATCTCGCCAACATGTGGGCCAACCGTGGCTACTACGGCTCAGTCAGCCACGACGTGAAGGCTACCTACGTCCT
TTACCTCGGCTGGTTCAATGGCAACCCCGCCACGCTGGACGAACTGACGCCGGTGGAAGCCAGCAAGCGCTACGTCGAGT
TCATGGGCGGCGCCAATGCCGTGCTGTCGAAGGCCAAGCAGGCGTACGACAAGGGTGAGTATCGCTGGGTGGCCCAGGTG
GTCAATCACGTGGTGTTTGCCGACCCGTCGAACAAGGCGGCCAAGAACCTCCAGGCCGACGCGCTCGAGCAACTGGGCTA
CCAGGCCGAATCCGGCCCGTGGCGCAACTTCTACCTGACCGGTGCCAAGGAATTGCGCGAAGGCGTGAAGAAGCTGCCCA
CGCCGAACACCGCGAGCGGCGATACGGTGAAGGCCATGACGCCGGAGATGTTCTTCGACTATCTCAGCGTTCGCGTGAAC
CGCGCCAAGGCGGCCAATGCGAAGATCGCGCTGAATGTCGACTTCGGCAAGGAAGGCGGCAAGTATCTGCTCGAACTTGA
GAACGGCGTGCTCAACCACACGGCAGGCGTTGAATCCGCAAACGCTGATGCCTCCGTGGCAATGTCACGCGACACGCTGA
ACGGCATCATCCTGCAACAGACGAAGCTGGCCGACGCGATCAAGAACGGATCGGCGAAGGTCACTGGCAATCAGGCCAAG
CTCGACGAACTGGTGAGCTACCTCGACAACTTCGAGTTCTGGTTCAATATCGTCACGCCGTAA

Upstream 100 bases:

>100_bases
TCAGGCTCGTATTTGTCGGGATACACGGGTCTGCACACTTGGCCAACGCCCCCATAACCAGGCCGGCACAAATTCGATTG
GGACAATCAAAGAGGAAAAC

Downstream 100 bases:

>100_bases
TGCAAAAAAGGCCCCGGCGCTTGCCTAAAGCGCCGGGGCCTTTTGCCGCGCGTTAGTCTCAAACGCGGCGGCTACATGCG
GAAATCCGCCGCCATGTCTT

Product: putative alkyl sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MKNSRFRASVVTLVSAAVLSQFGAAYAQDARKDATSATKAANQKLLSELPFSDRSDFDDAHRGFVAPLPNTVIKGSSGNA
IWNPNQYAFIKEGSQAPGTVNPSLWRQAQLINISGLFQVTDGIYQVRNQDLSNMTIIEGKEGITVVDPLVSEETAKVAID
LYYANRGRKPVKAVIYTHSHVDHYGGVRGVISQDDVTSGKVKIYAPEGFLEAAVAENVMAGNAMSRRASYMYGNLLPADE
KGQVGAGLGTTTSAGTVTLLSPTDTITKTGEKRVIDGLTYEFLMAPGSEAPAEMLWYIEEKRAISAAEDCTHTLHNTYSL
RGAKIREPLPWSKYLNQALTMWGAKADVMFAQHHWPSFGQKNVVHLLRQQRDLYRYINDETLRLANQGETMVEIADKFKL
PPDLANMWANRGYYGSVSHDVKATYVLYLGWFNGNPATLDELTPVEASKRYVEFMGGANAVLSKAKQAYDKGEYRWVAQV
VNHVVFADPSNKAAKNLQADALEQLGYQAESGPWRNFYLTGAKELREGVKKLPTPNTASGDTVKAMTPEMFFDYLSVRVN
RAKAANAKIALNVDFGKEGGKYLLELENGVLNHTAGVESANADASVAMSRDTLNGIILQQTKLADAIKNGSAKVTGNQAK
LDELVSYLDNFEFWFNIVTP

Sequences:

>Translated_660_residues
MKNSRFRASVVTLVSAAVLSQFGAAYAQDARKDATSATKAANQKLLSELPFSDRSDFDDAHRGFVAPLPNTVIKGSSGNA
IWNPNQYAFIKEGSQAPGTVNPSLWRQAQLINISGLFQVTDGIYQVRNQDLSNMTIIEGKEGITVVDPLVSEETAKVAID
LYYANRGRKPVKAVIYTHSHVDHYGGVRGVISQDDVTSGKVKIYAPEGFLEAAVAENVMAGNAMSRRASYMYGNLLPADE
KGQVGAGLGTTTSAGTVTLLSPTDTITKTGEKRVIDGLTYEFLMAPGSEAPAEMLWYIEEKRAISAAEDCTHTLHNTYSL
RGAKIREPLPWSKYLNQALTMWGAKADVMFAQHHWPSFGQKNVVHLLRQQRDLYRYINDETLRLANQGETMVEIADKFKL
PPDLANMWANRGYYGSVSHDVKATYVLYLGWFNGNPATLDELTPVEASKRYVEFMGGANAVLSKAKQAYDKGEYRWVAQV
VNHVVFADPSNKAAKNLQADALEQLGYQAESGPWRNFYLTGAKELREGVKKLPTPNTASGDTVKAMTPEMFFDYLSVRVN
RAKAANAKIALNVDFGKEGGKYLLELENGVLNHTAGVESANADASVAMSRDTLNGIILQQTKLADAIKNGSAKVTGNQAK
LDELVSYLDNFEFWFNIVTP
>Mature_660_residues
MKNSRFRASVVTLVSAAVLSQFGAAYAQDARKDATSATKAANQKLLSELPFSDRSDFDDAHRGFVAPLPNTVIKGSSGNA
IWNPNQYAFIKEGSQAPGTVNPSLWRQAQLINISGLFQVTDGIYQVRNQDLSNMTIIEGKEGITVVDPLVSEETAKVAID
LYYANRGRKPVKAVIYTHSHVDHYGGVRGVISQDDVTSGKVKIYAPEGFLEAAVAENVMAGNAMSRRASYMYGNLLPADE
KGQVGAGLGTTTSAGTVTLLSPTDTITKTGEKRVIDGLTYEFLMAPGSEAPAEMLWYIEEKRAISAAEDCTHTLHNTYSL
RGAKIREPLPWSKYLNQALTMWGAKADVMFAQHHWPSFGQKNVVHLLRQQRDLYRYINDETLRLANQGETMVEIADKFKL
PPDLANMWANRGYYGSVSHDVKATYVLYLGWFNGNPATLDELTPVEASKRYVEFMGGANAVLSKAKQAYDKGEYRWVAQV
VNHVVFADPSNKAAKNLQADALEQLGYQAESGPWRNFYLTGAKELREGVKKLPTPNTASGDTVKAMTPEMFFDYLSVRVN
RAKAANAKIALNVDFGKEGGKYLLELENGVLNHTAGVESANADASVAMSRDTLNGIILQQTKLADAIKNGSAKVTGNQAK
LDELVSYLDNFEFWFNIVTP

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=663, Percent_Identity=52.0361990950226, Blast_Score=694, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6324409, Length=634, Percent_Identity=47.3186119873817, Blast_Score=641, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 72390; Mature: 72390

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSRFRASVVTLVSAAVLSQFGAAYAQDARKDATSATKAANQKLLSELPFSDRSDFDDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
HRGFVAPLPNTVIKGSSGNAIWNPNQYAFIKEGSQAPGTVNPSLWRQAQLINISGLFQVT
HCCEECCCCCCEEECCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCEEEEEECHHHHHH
DGIYQVRNQDLSNMTIIEGKEGITVVDPLVSEETAKVAIDLYYANRGRKPVKAVIYTHSH
HHHHHHHCCCCCCEEEEECCCCCEEECCHHCCCCEEEEEEEEEECCCCCCEEEEEEECCC
VDHYGGVRGVISQDDVTSGKVKIYAPEGFLEAAVAENVMAGNAMSRRASYMYGNLLPADE
HHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
KGQVGAGLGTTTSAGTVTLLSPTDTITKTGEKRVIDGLTYEFLMAPGSEAPAEMLWYIEE
CCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHH
KRAISAAEDCTHTLHNTYSLRGAKIREPLPWSKYLNQALTMWGAKADVMFAQHHWPSFGQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
KNVVHLLRQQRDLYRYINDETLRLANQGETMVEIADKFKLPPDLANMWANRGYYGSVSHD
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
VKATYVLYLGWFNGNPATLDELTPVEASKRYVEFMGGANAVLSKAKQAYDKGEYRWVAQV
CEEEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
VNHVVFADPSNKAAKNLQADALEQLGYQAESGPWRNFYLTGAKELREGVKKLPTPNTASG
HHHEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCC
DTVKAMTPEMFFDYLSVRVNRAKAANAKIALNVDFGKEGGKYLLELENGVLNHTAGVESA
CEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC
NADASVAMSRDTLNGIILQQTKLADAIKNGSAKVTGNQAKLDELVSYLDNFEFWFNIVTP
CCCCEEEEECCCCCCEEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MKNSRFRASVVTLVSAAVLSQFGAAYAQDARKDATSATKAANQKLLSELPFSDRSDFDDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
HRGFVAPLPNTVIKGSSGNAIWNPNQYAFIKEGSQAPGTVNPSLWRQAQLINISGLFQVT
HCCEECCCCCCEEECCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCEEEEEECHHHHHH
DGIYQVRNQDLSNMTIIEGKEGITVVDPLVSEETAKVAIDLYYANRGRKPVKAVIYTHSH
HHHHHHHCCCCCCEEEEECCCCCEEECCHHCCCCEEEEEEEEEECCCCCCEEEEEEECCC
VDHYGGVRGVISQDDVTSGKVKIYAPEGFLEAAVAENVMAGNAMSRRASYMYGNLLPADE
HHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
KGQVGAGLGTTTSAGTVTLLSPTDTITKTGEKRVIDGLTYEFLMAPGSEAPAEMLWYIEE
CCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHH
KRAISAAEDCTHTLHNTYSLRGAKIREPLPWSKYLNQALTMWGAKADVMFAQHHWPSFGQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
KNVVHLLRQQRDLYRYINDETLRLANQGETMVEIADKFKLPPDLANMWANRGYYGSVSHD
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
VKATYVLYLGWFNGNPATLDELTPVEASKRYVEFMGGANAVLSKAKQAYDKGEYRWVAQV
CEEEEEEEEEEECCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
VNHVVFADPSNKAAKNLQADALEQLGYQAESGPWRNFYLTGAKELREGVKKLPTPNTASG
HHHEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCC
DTVKAMTPEMFFDYLSVRVNRAKAANAKIALNVDFGKEGGKYLLELENGVLNHTAGVESA
CEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC
NADASVAMSRDTLNGIILQQTKLADAIKNGSAKVTGNQAKLDELVSYLDNFEFWFNIVTP
CCCCEEEEECCCCCCEEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]