Click here to switch to the map view.

The map label for this gene is yfiQ [C]

Identifier: 94314286

GI number: 94314286

Start: 2089115

End: 2091262

Strand: Reverse

Name: yfiQ [C]

Synonym: Rmet_5367

Alternate gene names: 94314286

Gene position: 2091262-2089115 (Counterclockwise)

Preceding gene: 94314287

Following gene: 94314283

Centisome position: 81.05

GC content: 67.6

Gene sequence:

>2148_bases
ATGACTAGCGTCGATCACGACACGAAGCGATCCACCGAACGAATCGCGCGCGAACAACTGGCCCGGGCACTGTTCACCCC
CGATGCCGTCGCGCTCGTAGGCGCTTCGGCCGACGAAAAGAAGAATACGGCCCGACCGCTGCGTTTCATGCGCAAGCATG
GTTTCCAGGGGCGCGTGTTCCCGGTCAATGCCGGGCGTAGCGAGGTGATGGGCCTTCAGGCGTATCCCAGCGTCGCGGCA
CTGCCAGCGGCGATCGACCACGCGTTTGTGATGGTGCCGGGCGCGCAGGTGGCCGAGGCACTTGAACAATCCGCCGCGCG
TGGCGCGCGCGTGGTGACGGTCTTCTCCGACGGCTTCGCCGAGGTGGGCGAGGCTGGCATGGCCGCCCAGCAGGCGCTGG
CGGCGCGGGCACGTGAACTGGGCGTGCGGCTGCTGGGACCGAACAGTATCGGCGTGGTCGACGTGCACAGCGGCGCCGTG
CTTTCCGTCAACGCCGTGCTGGAGATGGATACGCTCCATCGAGGTCCTGTCAGCGTGATCTCCCAAAGCGGCTCCATGCT
GGGCGCGCTGTTGTCGCGCGGCGCGGCGCGTGGCCTCGGGTTTGCCAAGCTGGTTTCGGTCGGCAACGAAAGCGACATCG
GCGTGGGTGAACTGGTGGACCTGCTCGTTGACGATGCCGCTACCGAAGTCATCCTGCTGTTCCTCGAAACGATTCGCGAC
GCGGCGGTGCTGGGCCCCGCGCTCCGCCGCGCGCGCGCTGCCGGCAAGCCGGTGCTGGTCTACAAGCTAGGTCGCTCCGA
GCAGGGCGAGGCGCTTGCGCAATCGCATACGGGGGCACTGGCCGGCAACGATGCGGCGGTCGATGCCTTCCTGCGCAAGC
ATGGCGCGATGCGCGTGGAATTGCTTGAAACACTGTTCGAAGCCGCACCGCTGGCGTTGCGCTACGCAAGCCATGTGCCG
GCGCTGACCCGTGCGCCGCGCGTGGCCGTGGTGACCACCACGGGCGGTGGCGCAGCGACCGTGGTGGACCGGCTGGGCCT
GGCGGACGTGGAAGCGGTGCCGCCACCCGCATCGTTCGTCGCGCATATGGCTGAGCGCGGCGTGAAGATTCGCCAGACAC
CGATCATCGACCTGACGCTGGCGGCTACAAGTGCCCAGTACCGGGATCTGGTCGAGCAGATGCGGCTGGGTGACTGGTGT
GACGCCGTGCTGTGCGTGGTGGGCTCGTCAGCGCAGTTTCATCCACAGCTTGCCGTCAAGCCGATCGTCGAGGCTGCAGG
CGTCGGCAGCAAACCGCTGCTGTCGTTCCTGGCTCCGGAAGCACCGGAGTCCCTGCAATTGCTGCAGGCGGCGGGTGTGC
CGGCATTCCGCACGCCGGAGAGCTGTGCCGATGCGCTGGCGTGCCTGTTCCGAGGCGCGCATGTTGGCGAAGACGCGTCC
GAATCCTGTCAGCCCATGCAGTGGCCGGCCGGCTTGCCGACGCTGGGCGATCTCTCGGAGCTTGAGGCAGCGACGGTGTT
CGGTGCGCTGGGGGTGCCGATCGCGACGGCAGAACTGGTGACAGAAGGGGCGCTGCAGCACGCCGTGCCGTACCCGGTAG
TGGCCAAGATCTGCTCGCGCGACATCTTGCACAAGACCGAGATCGGTGGTGTGCAAGTTGGCGTGCGCGATAACGCGGAA
CTGGCTGCCGCCGCGGAACGCCTGATGGACAATGCGCGCCGTGGCGCGCCCGCCGCGCGCATCGACGGCATTCTGGTCCA
GCGCATGGAAGATCGCCTGCTGGAGTTGATGCTGGGCTTCCGCGACGACCCGCTGGTGGGGCCGATGGTCATGCTCAGCG
CCGGCGGTATCACCGCCGAACTTCACCGGGATGTCAGTCTGCGCCCAGCGCCGGTGACGCCGGCAGAGGCCATGCAGATG
ATCGAGGAGGTCCGCACGACGCGCCTGATTCGTGGCTTCCGTGGGCTGCCCCGGGGCGACGTCGATGCGCTGGCTGACGC
GATCGTCCGATTCTCGCGTCTGGCCGCTGTCCAGGGCGTCACAGTTGCCGAGGCTGAAATCAACCCATTGTTCGTGCGCG
CCAATGGCGTGGTCGGCGTCGACTGCGTGCTGCGGCTCGCGCCTGCCACGGACACGGCAGGCGCATAG

Upstream 100 bases:

>100_bases
GCTCTGGCGCCTGGACGACCGGCCCTTGCGCTCGCTGGCCCTGGACAAGCTCCAGATGGGCTGACCTTTTCCCGACATCC
AATCTTCTTCACAAAACACC

Downstream 100 bases:

>100_bases
CCCGGACAACTGTAGCCTGTAACGCTGTCCATGCTGATGCCAGCGGCGCGTTATGCCTTCACAGGCTGCCCGGCGCGCTT
GCTGGCACGGCCGAGCCACA

Product: putative Acyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 715; Mature: 714

Protein sequence:

>715_residues
MTSVDHDTKRSTERIAREQLARALFTPDAVALVGASADEKKNTARPLRFMRKHGFQGRVFPVNAGRSEVMGLQAYPSVAA
LPAAIDHAFVMVPGAQVAEALEQSAARGARVVTVFSDGFAEVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAV
LSVNAVLEMDTLHRGPVSVISQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGVGELVDLLVDDAATEVILLFLETIRD
AAVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGNDAAVDAFLRKHGAMRVELLETLFEAAPLALRYASHVP
ALTRAPRVAVVTTTGGGAATVVDRLGLADVEAVPPPASFVAHMAERGVKIRQTPIIDLTLAATSAQYRDLVEQMRLGDWC
DAVLCVVGSSAQFHPQLAVKPIVEAAGVGSKPLLSFLAPEAPESLQLLQAAGVPAFRTPESCADALACLFRGAHVGEDAS
ESCQPMQWPAGLPTLGDLSELEAATVFGALGVPIATAELVTEGALQHAVPYPVVAKICSRDILHKTEIGGVQVGVRDNAE
LAAAAERLMDNARRGAPAARIDGILVQRMEDRLLELMLGFRDDPLVGPMVMLSAGGITAELHRDVSLRPAPVTPAEAMQM
IEEVRTTRLIRGFRGLPRGDVDALADAIVRFSRLAAVQGVTVAEAEINPLFVRANGVVGVDCVLRLAPATDTAGA

Sequences:

>Translated_715_residues
MTSVDHDTKRSTERIAREQLARALFTPDAVALVGASADEKKNTARPLRFMRKHGFQGRVFPVNAGRSEVMGLQAYPSVAA
LPAAIDHAFVMVPGAQVAEALEQSAARGARVVTVFSDGFAEVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAV
LSVNAVLEMDTLHRGPVSVISQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGVGELVDLLVDDAATEVILLFLETIRD
AAVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGNDAAVDAFLRKHGAMRVELLETLFEAAPLALRYASHVP
ALTRAPRVAVVTTTGGGAATVVDRLGLADVEAVPPPASFVAHMAERGVKIRQTPIIDLTLAATSAQYRDLVEQMRLGDWC
DAVLCVVGSSAQFHPQLAVKPIVEAAGVGSKPLLSFLAPEAPESLQLLQAAGVPAFRTPESCADALACLFRGAHVGEDAS
ESCQPMQWPAGLPTLGDLSELEAATVFGALGVPIATAELVTEGALQHAVPYPVVAKICSRDILHKTEIGGVQVGVRDNAE
LAAAAERLMDNARRGAPAARIDGILVQRMEDRLLELMLGFRDDPLVGPMVMLSAGGITAELHRDVSLRPAPVTPAEAMQM
IEEVRTTRLIRGFRGLPRGDVDALADAIVRFSRLAAVQGVTVAEAEINPLFVRANGVVGVDCVLRLAPATDTAGA
>Mature_714_residues
TSVDHDTKRSTERIAREQLARALFTPDAVALVGASADEKKNTARPLRFMRKHGFQGRVFPVNAGRSEVMGLQAYPSVAAL
PAAIDHAFVMVPGAQVAEALEQSAARGARVVTVFSDGFAEVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAVL
SVNAVLEMDTLHRGPVSVISQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGVGELVDLLVDDAATEVILLFLETIRDA
AVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGNDAAVDAFLRKHGAMRVELLETLFEAAPLALRYASHVPA
LTRAPRVAVVTTTGGGAATVVDRLGLADVEAVPPPASFVAHMAERGVKIRQTPIIDLTLAATSAQYRDLVEQMRLGDWCD
AVLCVVGSSAQFHPQLAVKPIVEAAGVGSKPLLSFLAPEAPESLQLLQAAGVPAFRTPESCADALACLFRGAHVGEDASE
SCQPMQWPAGLPTLGDLSELEAATVFGALGVPIATAELVTEGALQHAVPYPVVAKICSRDILHKTEIGGVQVGVRDNAEL
AAAAERLMDNARRGAPAARIDGILVQRMEDRLLELMLGFRDDPLVGPMVMLSAGGITAELHRDVSLRPAPVTPAEAMQMI
EEVRTTRLIRGFRGLPRGDVDALADAIVRFSRLAAVQGVTVAEAEINPLFVRANGVVGVDCVLRLAPATDTAGA

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=736, Percent_Identity=27.7173913043478, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 74755; Mature: 74624

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVDHDTKRSTERIAREQLARALFTPDAVALVGASADEKKNTARPLRFMRKHGFQGRVF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHHHHCCCCCEEE
PVNAGRSEVMGLQAYPSVAALPAAIDHAFVMVPGAQVAEALEQSAARGARVVTVFSDGFA
EECCCHHHHCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHH
EVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAVLSVNAVLEMDTLHRGPVSVI
HHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEEEHEEEHHHCCCCCHHHH
SQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGVGELVDLLVDDAATEVILLFLETIRD
HCCCHHHHHHHHCCHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGNDAAVDAFLRKHGAMRVE
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH
LLETLFEAAPLALRYASHVPALTRAPRVAVVTTTGGGAATVVDRLGLADVEAVPPPASFV
HHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHH
AHMAERGVKIRQTPIIDLTLAATSAQYRDLVEQMRLGDWCDAVLCVVGSSAQFHPQLAVK
HHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHH
PIVEAAGVGSKPLLSFLAPEAPESLQLLQAAGVPAFRTPESCADALACLFRGAHVGEDAS
HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
ESCQPMQWPAGLPTLGDLSELEAATVFGALGVPIATAELVTEGALQHAVPYPVVAKICSR
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
DILHKTEIGGVQVGVRDNAELAAAAERLMDNARRGAPAARIDGILVQRMEDRLLELMLGF
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RDDPLVGPMVMLSAGGITAELHRDVSLRPAPVTPAEAMQMIEEVRTTRLIRGFRGLPRGD
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
VDALADAIVRFSRLAAVQGVTVAEAEINPLFVRANGVVGVDCVLRLAPATDTAGA
HHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEHHHHEEECCCCCCCCC
>Mature Secondary Structure 
TSVDHDTKRSTERIAREQLARALFTPDAVALVGASADEKKNTARPLRFMRKHGFQGRVF
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHHHHCCCCCEEE
PVNAGRSEVMGLQAYPSVAALPAAIDHAFVMVPGAQVAEALEQSAARGARVVTVFSDGFA
EECCCHHHHCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHH
EVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAVLSVNAVLEMDTLHRGPVSVI
HHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEEEHEEEHHHCCCCCHHHH
SQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGVGELVDLLVDDAATEVILLFLETIRD
HCCCHHHHHHHHCCHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGNDAAVDAFLRKHGAMRVE
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH
LLETLFEAAPLALRYASHVPALTRAPRVAVVTTTGGGAATVVDRLGLADVEAVPPPASFV
HHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHH
AHMAERGVKIRQTPIIDLTLAATSAQYRDLVEQMRLGDWCDAVLCVVGSSAQFHPQLAVK
HHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHH
PIVEAAGVGSKPLLSFLAPEAPESLQLLQAAGVPAFRTPESCADALACLFRGAHVGEDAS
HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
ESCQPMQWPAGLPTLGDLSELEAATVFGALGVPIATAELVTEGALQHAVPYPVVAKICSR
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
DILHKTEIGGVQVGVRDNAELAAAAERLMDNARRGAPAARIDGILVQRMEDRLLELMLGF
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RDDPLVGPMVMLSAGGITAELHRDVSLRPAPVTPAEAMQMIEEVRTTRLIRGFRGLPRGD
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
VDALADAIVRFSRLAAVQGVTVAEAEINPLFVRANGVVGVDCVLRLAPATDTAGA
HHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]