| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314274
Identifier: 94314274
GI number: 94314274
Start: 2076003
End: 2076908
Strand: Direct
Name: 94314274
Synonym: Rmet_5355
Alternate gene names: NA
Gene position: 2076003-2076908 (Clockwise)
Preceding gene: 94314273
Following gene: 94314276
Centisome position: 80.46
GC content: 65.23
Gene sequence:
>906_bases ATGACACTGACGACGCCAATCCGCGCAACACTTCGCCGCACCCTGTGCACGCTGCTGCTGGGTGCAGCCGCGAGCCTGAC ACCCGCGGCGCACGCCAACGAGGTCTTCGCCACGCCCGAGGCCGCGATGACCGCTTTCGGCAACGCCGTCATCAACGACG ACGAGCCGACGCTGCAGAAACTGTTCGGCGGCAAGTTCCGCGACATCATTCCGCCGGTGGGCGCCGAGGTCCGCAGCAAG TTCCTGACAGCCTGGGGCAAGTCCCACGCTGTCGATCAGAAAGAGAATCGCGCCTATATCGACGTGGGAGACGACGGCTG GACCTTCCCCATTCCACTGGTGAAGGGCAGCAAGGGCTGGCAGTTCGACACGCTGGCCGGCGTGGAGGAAATGCGGGTGC GCAGGGTGGGCCGCAACGAGCTGGCCGTCATCCAGACCATGCTGGCGATCACCGACGCACAGGCCGAATACGCGCTGACG CTGCACGATGGCAGCAAGACGCTGGTGTACGCATCGAAGCTGTCGAGCACGCCCGGCAAGCAGGATGGCCTCTACTGGGC CTCCGCGCCAGGCGAGCCACAGAGCCCGCTAGGCGCTGCGTTTCGCGGCGCGGGAACAAGCCATGCCAGCAAGGATGGCT ATTACGGATATCACTACAAGCTGCTCGACGCGCAAGGCCCCAACGCCCCGGGCGGGGCCTACAGCTATGTGGTCAACGGC AATCTCTTCGGCGGCTTTGCCGTGCTGGCATGGCCGGCGCGCTATCAGGACACCGGCGTCATGAGCTTCATGGTCAGCCA CGACGGCCAAGTCTACGAGCGAGACCTTGGCGCCGACAGCGCGGTCAAGGCCAAGGAGATCCGGAACTTCGATCCGGGTG CGGGATGGAGAAAGGTGGCGCCGTAG
Upstream 100 bases:
>100_bases TAATCGCGGCGGTGGCGGATATTCGGGCGGCGCGCGTGGCGGTGGCGGCGGTTTCGGTGGCGGCCGCGGCGGCGGTGGAC GTCGATAAGCGGAGGCAACC
Downstream 100 bases:
>100_bases CAGGGTCGTAGGTCGTAGGGTCGCAGCGTCACCTTCCGCTTCTCCGAATCACTCCTTCGGAATACCCGCGATTTCCGCGG CCTTCGTCCAGCGCTGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTLTTPIRATLRRTLCTLLLGAAASLTPAAHANEVFATPEAAMTAFGNAVINDDEPTLQKLFGGKFRDIIPPVGAEVRSK FLTAWGKSHAVDQKENRAYIDVGDDGWTFPIPLVKGSKGWQFDTLAGVEEMRVRRVGRNELAVIQTMLAITDAQAEYALT LHDGSKTLVYASKLSSTPGKQDGLYWASAPGEPQSPLGAAFRGAGTSHASKDGYYGYHYKLLDAQGPNAPGGAYSYVVNG NLFGGFAVLAWPARYQDTGVMSFMVSHDGQVYERDLGADSAVKAKEIRNFDPGAGWRKVAP
Sequences:
>Translated_301_residues MTLTTPIRATLRRTLCTLLLGAAASLTPAAHANEVFATPEAAMTAFGNAVINDDEPTLQKLFGGKFRDIIPPVGAEVRSK FLTAWGKSHAVDQKENRAYIDVGDDGWTFPIPLVKGSKGWQFDTLAGVEEMRVRRVGRNELAVIQTMLAITDAQAEYALT LHDGSKTLVYASKLSSTPGKQDGLYWASAPGEPQSPLGAAFRGAGTSHASKDGYYGYHYKLLDAQGPNAPGGAYSYVVNG NLFGGFAVLAWPARYQDTGVMSFMVSHDGQVYERDLGADSAVKAKEIRNFDPGAGWRKVAP >Mature_300_residues TLTTPIRATLRRTLCTLLLGAAASLTPAAHANEVFATPEAAMTAFGNAVINDDEPTLQKLFGGKFRDIIPPVGAEVRSKF LTAWGKSHAVDQKENRAYIDVGDDGWTFPIPLVKGSKGWQFDTLAGVEEMRVRRVGRNELAVIQTMLAITDAQAEYALTL HDGSKTLVYASKLSSTPGKQDGLYWASAPGEPQSPLGAAFRGAGTSHASKDGYYGYHYKLLDAQGPNAPGGAYSYVVNGN LFGGFAVLAWPARYQDTGVMSFMVSHDGQVYERDLGADSAVKAKEIRNFDPGAGWRKVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32333; Mature: 32202
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTPIRATLRRTLCTLLLGAAASLTPAAHANEVFATPEAAMTAFGNAVINDDEPTLQK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCEEECCCCHHHHH LFGGKFRDIIPPVGAEVRSKFLTAWGKSHAVDQKENRAYIDVGDDGWTFPIPLVKGSKGW HHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC QFDTLAGVEEMRVRRVGRNELAVIQTMLAITDAQAEYALTLHDGSKTLVYASKLSSTPGK CCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCC QDGLYWASAPGEPQSPLGAAFRGAGTSHASKDGYYGYHYKLLDAQGPNAPGGAYSYVVNG CCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEC NLFGGFAVLAWPARYQDTGVMSFMVSHDGQVYERDLGADSAVKAKEIRNFDPGAGWRKVA CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEHHCCCCCHHHHHHHCCCCCCCCCCCCC P C >Mature Secondary Structure TLTTPIRATLRRTLCTLLLGAAASLTPAAHANEVFATPEAAMTAFGNAVINDDEPTLQK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCEEECCCCHHHHH LFGGKFRDIIPPVGAEVRSKFLTAWGKSHAVDQKENRAYIDVGDDGWTFPIPLVKGSKGW HHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC QFDTLAGVEEMRVRRVGRNELAVIQTMLAITDAQAEYALTLHDGSKTLVYASKLSSTPGK CCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCC QDGLYWASAPGEPQSPLGAAFRGAGTSHASKDGYYGYHYKLLDAQGPNAPGGAYSYVVNG CCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEC NLFGGFAVLAWPARYQDTGVMSFMVSHDGQVYERDLGADSAVKAKEIRNFDPGAGWRKVA CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEHHCCCCCHHHHHHHCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA