| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314233
Identifier: 94314233
GI number: 94314233
Start: 2021841
End: 2022263
Strand: Direct
Name: 94314233
Synonym: Rmet_5314
Alternate gene names: NA
Gene position: 2021841-2022263 (Clockwise)
Preceding gene: 94314232
Following gene: 94314234
Centisome position: 78.36
GC content: 67.38
Gene sequence:
>423_bases ATGCCTTCCTCGATGCCTTCGCTGTCATCCGCCGGCGATAGCCCTCACCGGCTGCCGCGCTGGCTGCACTGGGTCGCGTT GTTGCTGCTGTGCGCGGCCTACCTGCAGGGCGGACTGGTCAAGCTGTTCGACTTTCCCAGCGCGATGGCCGAGATGCAGC ACTTCGGCCTGTCGCCGGCTGGCCCGCTGGCGGCGGGAACCATCGCGCTGGAACTGGGCGCATCGGCCATGATCCTGAGC GGACGCGGCCGTTGGCTCGGCGCGCTGGCGCTGGCCGCATTCACACTGGCAGCGACATTCCTGGCCAACAGCTTCTGGAG CGCTCCGCCCGATGCCCGTTTCGGCATGGCAAATGCATTCTTCGAGCACCTGGGTCTGGTCGGCGGCTTCGTGCTGGTGG CCTGGCATGACCTGCGAGCGTAG
Upstream 100 bases:
>100_bases ATCGAACATGCCGACGTCCGACGAGAGCGGATTCTGGGGCGCGCTCGGCTGTTCGTGCTGGGCGTTCTGAGCCACGTGCC AATCTGAACGGAGACCGGTC
Downstream 100 bases:
>100_bases AGACGACAGATAGTCCACATGACGCAATCCGCCTCGACGGCAAACGCTCCCGCCTCCACAGGTACCTTCGCGCCGCTTGC GCAATCGACCTTCGCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Family; Transmembrane Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPSSMPSLSSAGDSPHRLPRWLHWVALLLLCAAYLQGGLVKLFDFPSAMAEMQHFGLSPAGPLAAGTIALELGASAMILS GRGRWLGALALAAFTLAATFLANSFWSAPPDARFGMANAFFEHLGLVGGFVLVAWHDLRA
Sequences:
>Translated_140_residues MPSSMPSLSSAGDSPHRLPRWLHWVALLLLCAAYLQGGLVKLFDFPSAMAEMQHFGLSPAGPLAAGTIALELGASAMILS GRGRWLGALALAAFTLAATFLANSFWSAPPDARFGMANAFFEHLGLVGGFVLVAWHDLRA >Mature_139_residues PSSMPSLSSAGDSPHRLPRWLHWVALLLLCAAYLQGGLVKLFDFPSAMAEMQHFGLSPAGPLAAGTIALELGASAMILSG RGRWLGALALAAFTLAATFLANSFWSAPPDARFGMANAFFEHLGLVGGFVLVAWHDLRA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14793; Mature: 14662
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSMPSLSSAGDSPHRLPRWLHWVALLLLCAAYLQGGLVKLFDFPSAMAEMQHFGLSPA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCC GPLAAGTIALELGASAMILSGRGRWLGALALAAFTLAATFLANSFWSAPPDARFGMANAF CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FEHLGLVGGFVLVAWHDLRA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSSMPSLSSAGDSPHRLPRWLHWVALLLLCAAYLQGGLVKLFDFPSAMAEMQHFGLSPA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCC GPLAAGTIALELGASAMILSGRGRWLGALALAAFTLAATFLANSFWSAPPDARFGMANAF CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FEHLGLVGGFVLVAWHDLRA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA