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The map label for this gene is ytcJ [H]

Identifier: 94314232

GI number: 94314232

Start: 2019945

End: 2021810

Strand: Direct

Name: ytcJ [H]

Synonym: Rmet_5313

Alternate gene names: 94314232

Gene position: 2019945-2021810 (Clockwise)

Preceding gene: 94314231

Following gene: 94314233

Centisome position: 78.29

GC content: 65.22

Gene sequence:

>1866_bases
ATGTCATCGACCCCCGACCTCATCCTCGTCAACGGCAAGTTCACCACGCTCGACAAGTCCAACCCGCAAGCCGACGCGGT
AGCCATCCAGGACGGGCGCTTCACCAGCGTGGGGACGCCCGACGACATCATGAAACTCGCGGGCGCGCAGACGACGGTGA
TCGACCTGAACGGCCGGCGAGCGATCCCCGGCCTGATCGACAGCCACATGCACATCATCCGTGGCGGCCTGAACTACAAC
ATGGAACTGCGCTGGGATGGCGTGCGCTCCCTGGCCGATGCGATGCGGATGCTCAAGGACCAGGTGGACCGCACCCCCGC
GCCGCAATGGGTGCGCGTGGTAGGCGGCTTCACCGAGCACCAGTTCGCCGAGAAACGGCTGCCGACCATCGACGAACTGA
ACGCCGTGGCGCCGGACACCCCTGTGTTTATCCTGCACCTGTACGACCGCGCGATCCTGAACGGCGCGGCGCTGCGCACG
GTTGGTTATACGAAGGACACCCCCAATCCGCCGGGCGGCGAGATCGTGCGCGATGCCAGCGGCAACCCCACTGGCCTGCT
GCTGGCCAAACCCAACGCCACCATCCTCTACGCCACGCTGGCCAAGGGGCCAAAGCTGCCGCTCGAGTACCAGAAGAACT
CGACGCGCCATTTCATGCGCGAGGTGAACCGGCTGGGTGTGACTGGCGTGATCGATGCCGGCGGCGGCTTCCAGAATTAC
CCCGAGGACTACAGCGTCATCGAGGATCTGCACAAGGAAGGCAACCTGACGGTGCGCCTGGCCTACAACCTGTTCACGCA
GAAGCCGAAGGCCGAGCTGAACGACTTCACCACTTGGACGTCCACCGTCAAGCCGGGCCAGGGCGATGACCTGTATCGGC
ACAACGGCGCTGGCGAGATGCTCGTCTACACCGCCGCCGACTTCGAGGACTTTCGCGTCGAGCGGCCCGACATGCCACCG
TCGATGGAAGCCGATCTGGAACCGGTGATCCGTCTGCTGGCCGAGAAGCGCTGGCCGTGGCGCCTGCACGCCACCTACGA
CGAGACGATCACGCGCGCGCTCGATGTCTACGAGAAGGTGGCGCGCGACATTCCGTTCACCGGCCTGAACTGGTTCTTCG
ATCACGCCGAGACGATCTCCGATCGCAATATCGACCGCATCGCCGCGCTCGGTGGCGGCATCGCCGTGCAGCACCGCATG
GCCTACCAGGGCGAGTACTTCGTCGAACGTTATGGCGCGAAAGCCGCCGAGGCCACGCCGCCGATCCGCAAGATGCTCGA
CAAGGGGGTCAAGGTGGGCGCAGGCACCGATGCGACGCGCGTGGCGTCCTACAACCCGTGGGTGTCGCTGTACTGGCTAA
CCACGGGCAAGACCGTGGGCGGCATGTCGATGTACCCCCAAGCCAATCTGCTCGATCGCGAAACCGCATTGCGCCTGTGG
ACCGAGGCCAATACGTGGTTCTCGTCCGAGGAAGGCAAGAAAGGGCAGATCAAGGCCGGCCAGCTCGCCGACCTCGCGGT
GCTGTCTGCCGACTATTTCTCGGTGCCCGGTGACGACATCCAGGACATCACGTCCGTGATGACCGTGCTCGGCGGCAAGG
TGGTCTACGGCGACGGCGAGTTCGGCAAGCATTCGCCGGAGATTCCGCCCGCGATGCCCGACTGGTCGCCAGCCCGCTAC
GGCAGCCAGTATCAGCCGCGGCCAACCGCCAAAGCAAAGACGCTGGCGATGAACACCGCCTGCGGCTGCGCGTCGTCATG
CGGCGTGCACGGCCATGCGCACGCGAAGGCCTGGACATCGAACATGCCGACGTCCGACGAGAGCGGATTCTGGGGCGCGC
TCGGCTGTTCGTGCTGGGCGTTCTGA

Upstream 100 bases:

>100_bases
TCCTGAATACTTAGGCCAACGCCACCCAACCCGCTACTCGCGGGCAACACATCGCCCCGACCGCCGCCATCGTGCGGCGG
CCTCTTTGGAGCTTTTCACC

Downstream 100 bases:

>100_bases
GCCACGTGCCAATCTGAACGGAGACCGGTCATGCCTTCCTCGATGCCTTCGCTGTCATCCGCCGGCGATAGCCCTCACCG
GCTGCCGCGCTGGCTGCACT

Product: putative metallo-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MSSTPDLILVNGKFTTLDKSNPQADAVAIQDGRFTSVGTPDDIMKLAGAQTTVIDLNGRRAIPGLIDSHMHIIRGGLNYN
MELRWDGVRSLADAMRMLKDQVDRTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAVAPDTPVFILHLYDRAILNGAALRT
VGYTKDTPNPPGGEIVRDASGNPTGLLLAKPNATILYATLAKGPKLPLEYQKNSTRHFMREVNRLGVTGVIDAGGGFQNY
PEDYSVIEDLHKEGNLTVRLAYNLFTQKPKAELNDFTTWTSTVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPDMPP
SMEADLEPVIRLLAEKRWPWRLHATYDETITRALDVYEKVARDIPFTGLNWFFDHAETISDRNIDRIAALGGGIAVQHRM
AYQGEYFVERYGAKAAEATPPIRKMLDKGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALRLW
TEANTWFSSEEGKKGQIKAGQLADLAVLSADYFSVPGDDIQDITSVMTVLGGKVVYGDGEFGKHSPEIPPAMPDWSPARY
GSQYQPRPTAKAKTLAMNTACGCASSCGVHGHAHAKAWTSNMPTSDESGFWGALGCSCWAF

Sequences:

>Translated_621_residues
MSSTPDLILVNGKFTTLDKSNPQADAVAIQDGRFTSVGTPDDIMKLAGAQTTVIDLNGRRAIPGLIDSHMHIIRGGLNYN
MELRWDGVRSLADAMRMLKDQVDRTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAVAPDTPVFILHLYDRAILNGAALRT
VGYTKDTPNPPGGEIVRDASGNPTGLLLAKPNATILYATLAKGPKLPLEYQKNSTRHFMREVNRLGVTGVIDAGGGFQNY
PEDYSVIEDLHKEGNLTVRLAYNLFTQKPKAELNDFTTWTSTVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPDMPP
SMEADLEPVIRLLAEKRWPWRLHATYDETITRALDVYEKVARDIPFTGLNWFFDHAETISDRNIDRIAALGGGIAVQHRM
AYQGEYFVERYGAKAAEATPPIRKMLDKGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALRLW
TEANTWFSSEEGKKGQIKAGQLADLAVLSADYFSVPGDDIQDITSVMTVLGGKVVYGDGEFGKHSPEIPPAMPDWSPARY
GSQYQPRPTAKAKTLAMNTACGCASSCGVHGHAHAKAWTSNMPTSDESGFWGALGCSCWAF
>Mature_620_residues
SSTPDLILVNGKFTTLDKSNPQADAVAIQDGRFTSVGTPDDIMKLAGAQTTVIDLNGRRAIPGLIDSHMHIIRGGLNYNM
ELRWDGVRSLADAMRMLKDQVDRTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAVAPDTPVFILHLYDRAILNGAALRTV
GYTKDTPNPPGGEIVRDASGNPTGLLLAKPNATILYATLAKGPKLPLEYQKNSTRHFMREVNRLGVTGVIDAGGGFQNYP
EDYSVIEDLHKEGNLTVRLAYNLFTQKPKAELNDFTTWTSTVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPDMPPS
MEADLEPVIRLLAEKRWPWRLHATYDETITRALDVYEKVARDIPFTGLNWFFDHAETISDRNIDRIAALGGGIAVQHRMA
YQGEYFVERYGAKAAEATPPIRKMLDKGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALRLWT
EANTWFSSEEGKKGQIKAGQLADLAVLSADYFSVPGDDIQDITSVMTVLGGKVVYGDGEFGKHSPEIPPAMPDWSPARYG
SQYQPRPTAKAKTLAMNTACGCASSCGVHGHAHAKAWTSNMPTSDESGFWGALGCSCWAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 68285; Mature: 68154

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTPDLILVNGKFTTLDKSNPQADAVAIQDGRFTSVGTPDDIMKLAGAQTTVIDLNGRR
CCCCCCEEEECCEEEEECCCCCCCCEEEEECCEEECCCCCHHHHHHCCCCEEEEECCCCC
AIPGLIDSHMHIIRGGLNYNMELRWDGVRSLADAMRMLKDQVDRTPAPQWVRVVGGFTEH
CCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH
QFAEKRLPTIDELNAVAPDTPVFILHLYDRAILNGAALRTVGYTKDTPNPPGGEIVRDAS
HHHHHCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCC
GNPTGLLLAKPNATILYATLAKGPKLPLEYQKNSTRHFMREVNRLGVTGVIDAGGGFQNY
CCCCEEEEECCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHCCCEEEEECCCCCCCC
PEDYSVIEDLHKEGNLTVRLAYNLFTQKPKAELNDFTTWTSTVKPGQGDDLYRHNGAGEM
CCHHHHHHHHHHCCCEEEEEEEEHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCE
LVYTAADFEDFRVERPDMPPSMEADLEPVIRLLAEKRWPWRLHATYDETITRALDVYEKV
EEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH
ARDIPFTGLNWFFDHAETISDRNIDRIAALGGGIAVQHRMAYQGEYFVERYGAKAAEATP
HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHCCHHHHHHHCCCCCCCCC
PIRKMLDKGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALRLW
HHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCHHHHHEEE
TEANTWFSSEEGKKGQIKAGQLADLAVLSADYFSVPGDDIQDITSVMTVLGGKVVYGDGE
ECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCC
FGKHSPEIPPAMPDWSPARYGSQYQPRPTAKAKTLAMNTACGCASSCGVHGHAHAKAWTS
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCHHHHCC
NMPTSDESGFWGALGCSCWAF
CCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
SSTPDLILVNGKFTTLDKSNPQADAVAIQDGRFTSVGTPDDIMKLAGAQTTVIDLNGRR
CCCCCEEEECCEEEEECCCCCCCCEEEEECCEEECCCCCHHHHHHCCCCEEEEECCCCC
AIPGLIDSHMHIIRGGLNYNMELRWDGVRSLADAMRMLKDQVDRTPAPQWVRVVGGFTEH
CCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH
QFAEKRLPTIDELNAVAPDTPVFILHLYDRAILNGAALRTVGYTKDTPNPPGGEIVRDAS
HHHHHCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCC
GNPTGLLLAKPNATILYATLAKGPKLPLEYQKNSTRHFMREVNRLGVTGVIDAGGGFQNY
CCCCEEEEECCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHCCCEEEEECCCCCCCC
PEDYSVIEDLHKEGNLTVRLAYNLFTQKPKAELNDFTTWTSTVKPGQGDDLYRHNGAGEM
CCHHHHHHHHHHCCCEEEEEEEEHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCE
LVYTAADFEDFRVERPDMPPSMEADLEPVIRLLAEKRWPWRLHATYDETITRALDVYEKV
EEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH
ARDIPFTGLNWFFDHAETISDRNIDRIAALGGGIAVQHRMAYQGEYFVERYGAKAAEATP
HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHCCHHHHHHHCCCCCCCCC
PIRKMLDKGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALRLW
HHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCHHHHHEEE
TEANTWFSSEEGKKGQIKAGQLADLAVLSADYFSVPGDDIQDITSVMTVLGGKVVYGDGE
ECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCC
FGKHSPEIPPAMPDWSPARYGSQYQPRPTAKAKTLAMNTACGCASSCGVHGHAHAKAWTS
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCHHHHCC
NMPTSDESGFWGALGCSCWAF
CCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]