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The map label for this gene is tar [H]

Identifier: 94314225

GI number: 94314225

Start: 2008162

End: 2009859

Strand: Reverse

Name: tar [H]

Synonym: Rmet_5306

Alternate gene names: 94314225

Gene position: 2009859-2008162 (Counterclockwise)

Preceding gene: 94314227

Following gene: 94314215

Centisome position: 77.9

GC content: 64.61

Gene sequence:

>1698_bases
GTGCTCAATGCATCACACTGTGATGCAACAACATCCATATCGCCGAGGAATCGGCAACTGGGGGTAGCTGTGAAAATCCG
CGATCTGTCGATCAAGACCAGGCTCCTTGCGGGGTTTGGCGCGCTGGCACTCATCGTGCTGGTGGTTTCGGGGCTGTCTT
TGCGTGCGCTGAGTCAGGCGACCGACGGGTTCAGTGCCTACATCAACGGGCTCAACGCCCGTGGCGAGATGGCGTCCAAG
GTGCGCACGTCAGTCGATCGTCGCGCCATCGCCGCGCGCAATCTCGTGCTGGTCACCACGCCGGCAGACATCAGTCTGGA
AAAGGAAGCGGTGCTCAAGGCGCACGACGACGTGAAGGCGCGGCTGGGCCAGCTTAACGAGATGATCAAAGCCGAGGGTG
TAAGCGAGACCGCCCGAAATCTGGTGGCCGAGGTCGACCGCATCGAGGCGCGTTACGGTCCCGTGGCCACGGCCATCGTC
GCCCTGGCGCTCGAGGGCAAGCGTGACGCCGCCATCGAGAAAATGAACAACGAATGCCGCCCACTGCTGGCCGAGCTGAT
CAAGGCGACCAACACCTATGCCAGCTTCACCAAGGAGCGCCAGGACGAAATGATCCGGAAGCTGCAGGACGACTATGTCG
CGCAGCGCAATCTGCTGATCATCGTGTCGCTAGCCGCGGTGGCCTTTGCCATGACCGGCGGCATGTTGCTGACCCGCGCG
ATCACCGGGCCGATAGAGCGCGCCGTGGGCGTGGCCAGCACCGTCGCGCGCGGCGAGCTTGGCATGCGCATCGAGGTGAA
TTCCACCGACGAGACCGGCCGGCTGCTCGGCGCATTGCGTGACATGAACGAGCGCTTGAGCGAAACGGTGGCGCGCGTGC
GCGAGGGCAGTTCGAGCATCGCGGTGGCCACAGGCCAGATCGCCGAGGGCAACATGGACCTGTCGAGCCGTACCGAGCAG
CAGGCGGCGTCACTGGAGGAAACCGCGGCGAGCATCGAGGAACTGGCGGCGACGGTCCGCCACAACACCGAGAACGCCCG
ACAAGCCAGCGAACTGGCCCGCAACGCCACCGAAGTGGCCCAACAGGGCAGCAGCACCGTGGGCCGCGTGGTCGATACGA
TGGAAGGCATCAGTGCAAGCTCGACCAAGATCGCGGAGATCACCGGCATCATCGAAGGCATTGCATTCCAGACCAATATC
CTGGCGCTCAACGCCGCAGTGGAAGCTGCGCGTGCCGGCGAGCAGGGGCGCGGGTTTGCCGTGGTGGCCAGCGAGGTGCG
TGGGCTCGCACAGCGGTCGTCGAGTGCGGCCAAGGAAATCAAGGAGTTGATCGACGCATCGGTTGCCCAGGTGCAGGCTG
GCTCGTCGTTGGCCAGCGAAGCGGGCAAGACCATGACCGACGTCACGCAGGCCGTGGCTCGCGTCACCAATATCGTCGAC
GAGATTGCCACCGCGTCCGCCGAGCAGAACCGTGGCATCGAGCAGGTGAACCAGGCGATCGTGCAGATCGATCAGGTCAC
GCAGCAGAATGCCTCGCTGGTGCACGAGGCCGCGGAAGCGTCGAAGGCGCTTGAGGAGCAGAGCCGGTCGCTGGACGATG
CTGTGGCGTTCTTCAAGCTGCCATCGGGCGGCGGGCGCCTTCATGACGCGCACCGCGCCGTCGTTGGTCAGCGGACGGCA
GGCATCGCGTTCACGTAA

Upstream 100 bases:

>100_bases
AAATCGAGGGGCCCACAGCCGTTAGCCAGCAAACAACACATGCAGGGCGTTGGCGTGATGGCGCGGACGACACCTGTAAC
GCGTGATACGGGGATTTTCA

Downstream 100 bases:

>100_bases
GCCGCGTCTGTAAGCGTGCGCAGGAAGGCGACGATGTCGTCGATCTCGCCTTCCGTCAGCGCGGCCGGCATGTCTGGCCG
CCGGTTCATCGGCGGCGAGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLNASHCDATTSISPRNRQLGVAVKIRDLSIKTRLLAGFGALALIVLVVSGLSLRALSQATDGFSAYINGLNARGEMASK
VRTSVDRRAIAARNLVLVTTPADISLEKEAVLKAHDDVKARLGQLNEMIKAEGVSETARNLVAEVDRIEARYGPVATAIV
ALALEGKRDAAIEKMNNECRPLLAELIKATNTYASFTKERQDEMIRKLQDDYVAQRNLLIIVSLAAVAFAMTGGMLLTRA
ITGPIERAVGVASTVARGELGMRIEVNSTDETGRLLGALRDMNERLSETVARVREGSSSIAVATGQIAEGNMDLSSRTEQ
QAASLEETAASIEELAATVRHNTENARQASELARNATEVAQQGSSTVGRVVDTMEGISASSTKIAEITGIIEGIAFQTNI
LALNAAVEAARAGEQGRGFAVVASEVRGLAQRSSSAAKEIKELIDASVAQVQAGSSLASEAGKTMTDVTQAVARVTNIVD
EIATASAEQNRGIEQVNQAIVQIDQVTQQNASLVHEAAEASKALEEQSRSLDDAVAFFKLPSGGGRLHDAHRAVVGQRTA
GIAFT

Sequences:

>Translated_565_residues
MLNASHCDATTSISPRNRQLGVAVKIRDLSIKTRLLAGFGALALIVLVVSGLSLRALSQATDGFSAYINGLNARGEMASK
VRTSVDRRAIAARNLVLVTTPADISLEKEAVLKAHDDVKARLGQLNEMIKAEGVSETARNLVAEVDRIEARYGPVATAIV
ALALEGKRDAAIEKMNNECRPLLAELIKATNTYASFTKERQDEMIRKLQDDYVAQRNLLIIVSLAAVAFAMTGGMLLTRA
ITGPIERAVGVASTVARGELGMRIEVNSTDETGRLLGALRDMNERLSETVARVREGSSSIAVATGQIAEGNMDLSSRTEQ
QAASLEETAASIEELAATVRHNTENARQASELARNATEVAQQGSSTVGRVVDTMEGISASSTKIAEITGIIEGIAFQTNI
LALNAAVEAARAGEQGRGFAVVASEVRGLAQRSSSAAKEIKELIDASVAQVQAGSSLASEAGKTMTDVTQAVARVTNIVD
EIATASAEQNRGIEQVNQAIVQIDQVTQQNASLVHEAAEASKALEEQSRSLDDAVAFFKLPSGGGRLHDAHRAVVGQRTA
GIAFT
>Mature_565_residues
MLNASHCDATTSISPRNRQLGVAVKIRDLSIKTRLLAGFGALALIVLVVSGLSLRALSQATDGFSAYINGLNARGEMASK
VRTSVDRRAIAARNLVLVTTPADISLEKEAVLKAHDDVKARLGQLNEMIKAEGVSETARNLVAEVDRIEARYGPVATAIV
ALALEGKRDAAIEKMNNECRPLLAELIKATNTYASFTKERQDEMIRKLQDDYVAQRNLLIIVSLAAVAFAMTGGMLLTRA
ITGPIERAVGVASTVARGELGMRIEVNSTDETGRLLGALRDMNERLSETVARVREGSSSIAVATGQIAEGNMDLSSRTEQ
QAASLEETAASIEELAATVRHNTENARQASELARNATEVAQQGSSTVGRVVDTMEGISASSTKIAEITGIIEGIAFQTNI
LALNAAVEAARAGEQGRGFAVVASEVRGLAQRSSSAAKEIKELIDASVAQVQAGSSLASEAGKTMTDVTQAVARVTNIVD
EIATASAEQNRGIEQVNQAIVQIDQVTQQNASLVHEAAEASKALEEQSRSLDDAVAFFKLPSGGGRLHDAHRAVVGQRTA
GIAFT

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=56.0747663551402, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1788194, Length=333, Percent_Identity=52.5525525525526, Blast_Score=292, Evalue=4e-80,
Organism=Escherichia coli, GI1787690, Length=400, Percent_Identity=47, Blast_Score=292, Evalue=5e-80,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=56.2091503267974, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=39.4495412844037, Blast_Score=202, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59690; Mature: 59690

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNASHCDATTSISPRNRQLGVAVKIRDLSIKTRLLAGFGALALIVLVVSGLSLRALSQA
CCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TDGFSAYINGLNARGEMASKVRTSVDRRAIAARNLVLVTTPADISLEKEAVLKAHDDVKA
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH
RLGQLNEMIKAEGVSETARNLVAEVDRIEARYGPVATAIVALALEGKRDAAIEKMNNECR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHH
PLLAELIKATNTYASFTKERQDEMIRKLQDDYVAQRNLLIIVSLAAVAFAMTGGMLLTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
ITGPIERAVGVASTVARGELGMRIEVNSTDETGRLLGALRDMNERLSETVARVREGSSSI
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
AVATGQIAEGNMDLSSRTEQQAASLEETAASIEELAATVRHNTENARQASELARNATEVA
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QQGSSTVGRVVDTMEGISASSTKIAEITGIIEGIAFQTNILALNAAVEAARAGEQGRGFA
HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VVASEVRGLAQRSSSAAKEIKELIDASVAQVQAGSSLASEAGKTMTDVTQAVARVTNIVD
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHH
EIATASAEQNRGIEQVNQAIVQIDQVTQQNASLVHEAAEASKALEEQSRSLDDAVAFFKL
HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
PSGGGRLHDAHRAVVGQRTAGIAFT
CCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNASHCDATTSISPRNRQLGVAVKIRDLSIKTRLLAGFGALALIVLVVSGLSLRALSQA
CCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TDGFSAYINGLNARGEMASKVRTSVDRRAIAARNLVLVTTPADISLEKEAVLKAHDDVKA
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH
RLGQLNEMIKAEGVSETARNLVAEVDRIEARYGPVATAIVALALEGKRDAAIEKMNNECR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHH
PLLAELIKATNTYASFTKERQDEMIRKLQDDYVAQRNLLIIVSLAAVAFAMTGGMLLTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
ITGPIERAVGVASTVARGELGMRIEVNSTDETGRLLGALRDMNERLSETVARVREGSSSI
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
AVATGQIAEGNMDLSSRTEQQAASLEETAASIEELAATVRHNTENARQASELARNATEVA
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QQGSSTVGRVVDTMEGISASSTKIAEITGIIEGIAFQTNILALNAAVEAARAGEQGRGFA
HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VVASEVRGLAQRSSSAAKEIKELIDASVAQVQAGSSLASEAGKTMTDVTQAVARVTNIVD
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHH
EIATASAEQNRGIEQVNQAIVQIDQVTQQNASLVHEAAEASKALEEQSRSLDDAVAFFKL
HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
PSGGGRLHDAHRAVVGQRTAGIAFT
CCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]