Click here to switch to the map view.

The map label for this gene is 94314194

Identifier: 94314194

GI number: 94314194

Start: 1974500

End: 1975333

Strand: Direct

Name: 94314194

Synonym: Rmet_5275

Alternate gene names: NA

Gene position: 1974500-1975333 (Clockwise)

Preceding gene: 94314193

Following gene: 94314195

Centisome position: 76.53

GC content: 69.18

Gene sequence:

>834_bases
ATGCCCGAAGACTCTCGGCCCCAGCCCTCGGGGCGCCGCCGTCATCTGCTGGCCATGGGGCTTGGCGGCGCCGGCCTGAT
GGCCGCATCGCGCATGGCCACGGCGCAAACGCCCGCCACGCCTCTGCCCCTCACCGCGCAGACCACCGAGGGGCCGTTCT
ACTTCGATGCCGGCAAGGTCCGCCAGGACATCACCGAAGGCCAGCCAGGCGTGCCGGTGGAGGTCCGCTTCACGGTGGTC
GACATGCATGGCCGGCCGCTCGCGGGCAGGCGCGTCGACCTCTGGCACTGCAATGCCTCGGGGGTCTATTCCGGCTATGC
GGGCCAGGTGGATGACCACGGCCAGCGCGTGTCCATGCGGGACCGCACATTCCTGCGCGGAAGCCAGCCGGTGGGCGCCG
ACGGCGTGGCGGTGTTCCGCACCATCTACCCCGGTTGGTACGCGGGGCGCGCCACGCATCTGCATATGAAGGTAATCGAC
GGCAGCCGTACATTGCTGACTACGCAGTGTTTCCTGCCCGATGCGCTCAGCGAGTATCTCTATACGCAACTGCCGACATA
CCGCCGCAAGGGCGTGCGCGAAGTCCTCAACCGCAATGACGGTATCGCGCTGATGGCCGGCGATACCGTGCTGGGCGCCG
TGCGCGAAGCCCGCGACCGGTATGTGATCGCGCTGACCCTGGTGGTTGATCCCACCGCCACGGCGCCGCGCGAGCCAGGC
CATCCGCCGGGGCCACCACCCGGCGCACCCGGCGGCTTCGGCGAATCCATGGTGCCTGCCGAAGGCATGGCCCGCGTCGA
GGCGATCGTTCCCGGCCAGCATCTCCAGAAGTAG

Upstream 100 bases:

>100_bases
ATCCGAAGTGTAGCCGGGTCGACACCAGGCAGAAATACTGCGCGCCCCGGCCCGGACTACACTGGCATCCCACATCTTCA
TCGCCCTAACGGAACGTGTG

Downstream 100 bases:

>100_bases
CATCCCGCCCCACCGCCCCGGTTCCGTCTCACCCGCATGACGGATATACCGGGTGCAGTCAAATCCCCTACGCTGTACGG
ATTGCCGCCGCCAAACCCAT

Product: putative intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: Protocatechuate Dioxygenase; Dioxygenase; Twin-Arginine Translocation Pathway Signal; Protocatechuate 3 4-Dioxygenase Beta Chain; Protocatechuate 3 4-Dioxygenase; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Protocatechuate 3,4-Dioxygenase Protein Beta Chain; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit; Protocatechuate 3 4-Dioxygenase Subunit Beta; Catechol 1 2-Dioxygenase; Ring-Cleaving Dioxygenase Protein; Dioxygenase Subfamily Protein; Intradiol Dioxygenase

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPEDSRPQPSGRRRHLLAMGLGGAGLMAASRMATAQTPATPLPLTAQTTEGPFYFDAGKVRQDITEGQPGVPVEVRFTVV
DMHGRPLAGRRVDLWHCNASGVYSGYAGQVDDHGQRVSMRDRTFLRGSQPVGADGVAVFRTIYPGWYAGRATHLHMKVID
GSRTLLTTQCFLPDALSEYLYTQLPTYRRKGVREVLNRNDGIALMAGDTVLGAVREARDRYVIALTLVVDPTATAPREPG
HPPGPPPGAPGGFGESMVPAEGMARVEAIVPGQHLQK

Sequences:

>Translated_277_residues
MPEDSRPQPSGRRRHLLAMGLGGAGLMAASRMATAQTPATPLPLTAQTTEGPFYFDAGKVRQDITEGQPGVPVEVRFTVV
DMHGRPLAGRRVDLWHCNASGVYSGYAGQVDDHGQRVSMRDRTFLRGSQPVGADGVAVFRTIYPGWYAGRATHLHMKVID
GSRTLLTTQCFLPDALSEYLYTQLPTYRRKGVREVLNRNDGIALMAGDTVLGAVREARDRYVIALTLVVDPTATAPREPG
HPPGPPPGAPGGFGESMVPAEGMARVEAIVPGQHLQK
>Mature_276_residues
PEDSRPQPSGRRRHLLAMGLGGAGLMAASRMATAQTPATPLPLTAQTTEGPFYFDAGKVRQDITEGQPGVPVEVRFTVVD
MHGRPLAGRRVDLWHCNASGVYSGYAGQVDDHGQRVSMRDRTFLRGSQPVGADGVAVFRTIYPGWYAGRATHLHMKVIDG
SRTLLTTQCFLPDALSEYLYTQLPTYRRKGVREVLNRNDGIALMAGDTVLGAVREARDRYVIALTLVVDPTATAPREPGH
PPGPPPGAPGGFGESMVPAEGMARVEAIVPGQHLQK

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29846; Mature: 29715

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDSRPQPSGRRRHLLAMGLGGAGLMAASRMATAQTPATPLPLTAQTTEGPFYFDAGKV
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCHHH
RQDITEGQPGVPVEVRFTVVDMHGRPLAGRRVDLWHCNASGVYSGYAGQVDDHGQRVSMR
HHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECC
DRTFLRGSQPVGADGVAVFRTIYPGWYAGRATHLHMKVIDGSRTLLTTQCFLPDALSEYL
CCCEECCCCCCCCCCCEEEEHHCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHH
YTQLPTYRRKGVREVLNRNDGIALMAGDTVLGAVREARDRYVIALTLVVDPTATAPREPG
HHHCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC
HPPGPPPGAPGGFGESMVPAEGMARVEAIVPGQHLQK
CCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCHHHCC
>Mature Secondary Structure 
PEDSRPQPSGRRRHLLAMGLGGAGLMAASRMATAQTPATPLPLTAQTTEGPFYFDAGKV
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCHHH
RQDITEGQPGVPVEVRFTVVDMHGRPLAGRRVDLWHCNASGVYSGYAGQVDDHGQRVSMR
HHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECC
DRTFLRGSQPVGADGVAVFRTIYPGWYAGRATHLHMKVIDGSRTLLTTQCFLPDALSEYL
CCCEECCCCCCCCCCCEEEEHHCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHH
YTQLPTYRRKGVREVLNRNDGIALMAGDTVLGAVREARDRYVIALTLVVDPTATAPREPG
HHHCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC
HPPGPPPGAPGGFGESMVPAEGMARVEAIVPGQHLQK
CCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA