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The map label for this gene is ylaB [H]

Identifier: 94314195

GI number: 94314195

Start: 1975619

End: 1977208

Strand: Direct

Name: ylaB [H]

Synonym: Rmet_5276

Alternate gene names: 94314195

Gene position: 1975619-1977208 (Clockwise)

Preceding gene: 94314194

Following gene: 94314196

Centisome position: 76.57

GC content: 65.6

Gene sequence:

>1590_bases
ATGCAGCGAAGCTGGTTCCTGGTGGTGACGATCGTGCTGACGACGTTGGCCACGCTGTTTCCCGTGGGAATCGGTGTGTT
CATGGCGCAGCTCGAGGCGAACCGGCGCGAGGCAGACCAACTAAGCGTGTTTGCCGATGCCGCGACCCGGCGGGCCGAAC
TGGTCATGACGCAGGCAATCAATGCGCTGCAGGATATGGAAATGCTCCGGGAGGAGCCATGCACACCCGCCAACCTGGTC
CAGCTTCGCCGCATCACCTACACCTATTCCTATATTCAGGACGCCGGCATCTATCGCGCCGGCAAACGGCTTTGCTCGGC
GCTGCTTGGCCCCATCGAGCCTGGACAGCTCCCCTTGCCGCCGCCCGACTGGCGCACGCCTGACGGGCTGGACTACTGGT
TCGACCAGCCCGTCCCGTTCAATGCCCAGCGCCACGTGGTGCTGATCGGCCGCAACGGCAACAACGTCGGGCTCGACTCG
CAGGTCTTCGTCGATGTCGTCGATCGCGAATCGCGAATGCTGGCCGTGGTGCAGACCGACGCCGGCCGTATCTTCTCGGC
AACGCAGGGCGCGAACCTGACGCGGCTGCAGCAGGCCTACTCGGAACACTCATATGGGTCAGGCGCCGACGCCGCGCAGG
AAGACGACGCCTCGATCGTCCTGCGTAAATCACGCAACATGCCGCTGGCGGTCGTGGTGCTTGCCCCGCGCGCGGCGTTG
CTGGCCAACTGGAAATCGCTGCTGATCGGCGGGCTGGTGGTGGGACTGTCCGCCGGCGTGCCGCTCGGCATCCTGGTCTG
GCGACGGGCCACACGGCGCTTCAGCCTGGAAGGCGAACTGCGCAGCGCCGTGCGCCGCCACGAGATGGCAGTGCATTACC
AGCCGATTGCCTCGCTGGCGGACAACCACTGGGTGGGCGTGGAGGCGCTGGTCCGCTGGCGCCGCAACGGCAGGCTCGTG
CGGCCCAACCTGTTTATTCCGATGGCGGAGAACGCTGGTCTGATCCAGCAGATCACCGACCAGGTGCTGGACATTATCCT
GTCGGAACTCGGCACGCTGCTGCGCCGGTTCCCGTCGTTCTACGTGTCGATCAACGTCGGCGTGGAAGACCTCAAGAGCC
GGCGCTTTCTGAGCGTGCTCAATGCGCGGCTGCGCGGCTCAGGCATCGCGCCCCAGCAGATCCGCATCGAGGCCACCGAG
CGCGGCTTTCTGGAGCCCGACGTGGCCCGCGACACGATCCAGGCATTTCGCGATGCCGGACATCCGGTCTATATCGACGA
CTTCGGCACCGGCTATTCGAGCCTGTCGTACTTGCAGAGCTTCAAGGTCGATGCGCTCAAGATCGACAAGTCGTTCGTCG
ACACGATCGGCCAGGAGGCCGCGTCGAGTACCGTGGCGCCGCACATCATCGCGATGGCGCAGTCGCTCGGCCTGCAGGTC
ATCGCCGAGGGCATCGAGGACAAGATGCAGGCCGACTTCCTGCGCGAGCAGGGCGTCGACTACGGCCAGGGATGGCTGTT
CGGGCGGCCCATGCCCGCTGTGGAACTGGCGCAACTGATGACGCGGGCCACGCCGCAAGCGGTGGCCTGA

Upstream 100 bases:

>100_bases
TGATTTCCCTGTTGCAGCTCACCTCCGCTCAGTACTAGTTGGTCAATGGATGGCGCCCACCGAAGGCGCCGCGTGCAGCG
TAGTCTCGTGAGGGCCCCCG

Downstream 100 bases:

>100_bases
CGGCTAGAATCGACCAACCCACCGGTGATACGCCGCCGAATCATTTCCCAACGTATTGACCCCGGAGCCCCCGCATGTCG
CTACCTGCCCTGTTCCTGAC

Product: putative signal transduction protein (EAL domain)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAINALQDMEMLREEPCTPANLV
QLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLPPPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDS
QVFVDVVDRESRMLAVVQTDAGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAAL
LANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLADNHWVGVEALVRWRRNGRLV
RPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATE
RGFLEPDVARDTIQAFRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQV
IAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQAVA

Sequences:

>Translated_529_residues
MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAINALQDMEMLREEPCTPANLV
QLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLPPPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDS
QVFVDVVDRESRMLAVVQTDAGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAAL
LANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLADNHWVGVEALVRWRRNGRLV
RPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATE
RGFLEPDVARDTIQAFRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQV
IAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQAVA
>Mature_529_residues
MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAINALQDMEMLREEPCTPANLV
QLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLPPPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDS
QVFVDVVDRESRMLAVVQTDAGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAAL
LANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLADNHWVGVEALVRWRRNGRLV
RPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATE
RGFLEPDVARDTIQAFRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQV
IAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQAVA

Specific function: Unknown

COG id: COG4943

COG function: function code T; Predicted signal transduction protein containing sensor and EAL domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=504, Percent_Identity=33.531746031746, Blast_Score=285, Evalue=7e-78,
Organism=Escherichia coli, GI1790496, Length=505, Percent_Identity=33.2673267326733, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI87081980, Length=542, Percent_Identity=28.9667896678967, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI1788502, Length=307, Percent_Identity=30.6188925081433, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1787541, Length=258, Percent_Identity=35.6589147286822, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87081845, Length=275, Percent_Identity=29.4545454545455, Blast_Score=136, Evalue=4e-33,
Organism=Escherichia coli, GI87081921, Length=260, Percent_Identity=33.8461538461538, Blast_Score=128, Evalue=8e-31,
Organism=Escherichia coli, GI1786507, Length=235, Percent_Identity=32.3404255319149, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI226510982, Length=248, Percent_Identity=34.2741935483871, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788849, Length=250, Percent_Identity=28, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI87082096, Length=247, Percent_Identity=28.3400809716599, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=29.2887029288703, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 58506; Mature: 58506

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALQDMEMLREEPCTPANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDSQVFVDVVDRESRMLAVVQTD
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHEECCCCCEEEEEEEEC
AGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAAL
CCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCHHHH
LANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECHHHHHC
DNHWVGVEALVRWRRNGRLVRPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSF
CCCCHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
YVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGFLEPDVARDTIQAFRDAG
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC
HPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQV
CEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQAVA
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALQDMEMLREEPCTPANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDSQVFVDVVDRESRMLAVVQTD
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHEECCCCCEEEEEEEEC
AGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAAL
CCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCHHHH
LANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECHHHHHC
DNHWVGVEALVRWRRNGRLVRPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSF
CCCCHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
YVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGFLEPDVARDTIQAFRDAG
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC
HPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQV
CEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQAVA
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]