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The map label for this gene is fliK [H]

Identifier: 94314185

GI number: 94314185

Start: 1964246

End: 1965733

Strand: Direct

Name: fliK [H]

Synonym: Rmet_5266

Alternate gene names: 94314185

Gene position: 1964246-1965733 (Clockwise)

Preceding gene: 94314184

Following gene: 94314186

Centisome position: 76.13

GC content: 70.09

Gene sequence:

>1488_bases
ATGATCGATATCAGCCAGCTTATCGGTAACACCGCCAACGCCGCCCTCAAGACCCTGACGCAGTCCAACGCCGCCAGCAC
CGCCGCCGCGGACGCCAAGGCATTCCAGGACGCGCTTTCGCGCGCGCGTGATAGCGCCCCGCAGAGCGCGCAACCGGTCG
CCAGCAAGCCCAGGGACTCAAGCCAGACCAGCGCGCCGAAGGAAGACGCATCGCAAAACACGCGGCAGCAGACTACGCAG
GCCAGTACGTCGGGCGCTTCCAGCACACCGCAGCAGAAAGACAACGGCAAGACCAACGCCACGACCGGCAAGAAAGACGA
CAGCACGCAAGCCAGCGACGATGGCTCGACACCCTCGAGCGACGCGCAGGCTGCCGCAGCAGCCCTGGCCGCCGCGATGC
TGGCACAGCAGGCCGCGCCCGCCACGACGGCACTGACCGGTGGCGCGGCCGCTGATGCAGCCGCCAATGGTGCCGGATTG
GCCGGAGCCAACGGCCTCCCGCTCGCCGCTCAGACGGCCGCCACCACGACCGCTACGCAAGCAAACCCGGCGACCGACGC
CGCCACGCTGCTGGCTCAGGCCGCCGACGCGCAATCGGCCACGACTACCGCGGGCACTGCCGCCAAGGGGACCACGCCAA
GCCCGGCGGACACGCTGGCCACGATCGCCCAGCAGCGCGCGGCTGCGCAGAACAGCACGCCGACCGCCGCTGACAAGATC
GCCGCCGCGCTCAACAACCCGGCACAGACGGGCACACAGACGGGCGCGCAGGACGCACGCGGCCAGAACGCTGGCCAGCA
ACAGACCGGCCTCGGCCACGGCGCGCAACCGACCTTGCAAGCCGACACGACGCAAGCCAGCCAGACGCCCATCGCCACGC
CATATGCCATGGCACAGGCCAGCGCACGCACGGGTGAAGGCACCGACACCGGCGCCACGAATCCGAGCAGCGCTGCCATG
CTGGCATCGGCCCTGTCCGCGCAATCCCAGACGAACGCCGCACAGGCCACAGCCGCCGCAGCAGCGGCACGCCCGGCAGT
CGCACCGAATCTCGGCGACAGCCAGTGGGCTCAGGCACTGGGCCAGCAGATGGTGCGACTCTCCACGCAAGGCAGCCAGA
CCGCCGAACTCGACCTGAACCCGCCGAACCTCGGCCCGCTCAAGGTCGTGCTCAATGTGGTCAACGATCAGGCCCAGGCC
CAGTTCGTCTCTCCGCACCAGGCCGTGCGCGCCGCGGTGGAAGCCGCGCTGCCGCACCTGCGCACGTCGATGGCCGAAGC
CGGTATCCAGCTTGGCCAAACGTCTGTCGGCAGCGATGGTTTCGCCCAGGCTGGCAACGGCGGCCAGCAGCAACAACGCC
AACCGGGCAGCGGCAGCGCATTCGCGCAGGCCGCCGGGCTGACGCAGGATGCGCCAGTCCAGGCAACGGCGGCAGCGCCT
CGCGCACCGCGCGTGCTGGCGCGTGGGGAAGTCGATACGTTTGCCTGA

Upstream 100 bases:

>100_bases
GCAAGTCTCCGCCCGGCGCGAGCAGCGCGCCAACGACGAATACGCGGCCCGCATCGCCCGCCAGCCGGCGGCCGGCCGAA
CCTGATCCGACGAAGAGACC

Downstream 100 bases:

>100_bases
TTCGACTGCCTCACGGTTTCCCCCTCTCTCCCATTTCATGAGAGAGAGGGGGAACACAACTCGCGCTTGATGCGTGCGCC
GGCACGCACGCCTTCGCCCA

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MIDISQLIGNTANAALKTLTQSNAASTAAADAKAFQDALSRARDSAPQSAQPVASKPRDSSQTSAPKEDASQNTRQQTTQ
ASTSGASSTPQQKDNGKTNATTGKKDDSTQASDDGSTPSSDAQAAAAALAAAMLAQQAAPATTALTGGAAADAAANGAGL
AGANGLPLAAQTAATTTATQANPATDAATLLAQAADAQSATTTAGTAAKGTTPSPADTLATIAQQRAAAQNSTPTAADKI
AAALNNPAQTGTQTGAQDARGQNAGQQQTGLGHGAQPTLQADTTQASQTPIATPYAMAQASARTGEGTDTGATNPSSAAM
LASALSAQSQTNAAQATAAAAAARPAVAPNLGDSQWAQALGQQMVRLSTQGSQTAELDLNPPNLGPLKVVLNVVNDQAQA
QFVSPHQAVRAAVEAALPHLRTSMAEAGIQLGQTSVGSDGFAQAGNGGQQQQRQPGSGSAFAQAAGLTQDAPVQATAAAP
RAPRVLARGEVDTFA

Sequences:

>Translated_495_residues
MIDISQLIGNTANAALKTLTQSNAASTAAADAKAFQDALSRARDSAPQSAQPVASKPRDSSQTSAPKEDASQNTRQQTTQ
ASTSGASSTPQQKDNGKTNATTGKKDDSTQASDDGSTPSSDAQAAAAALAAAMLAQQAAPATTALTGGAAADAAANGAGL
AGANGLPLAAQTAATTTATQANPATDAATLLAQAADAQSATTTAGTAAKGTTPSPADTLATIAQQRAAAQNSTPTAADKI
AAALNNPAQTGTQTGAQDARGQNAGQQQTGLGHGAQPTLQADTTQASQTPIATPYAMAQASARTGEGTDTGATNPSSAAM
LASALSAQSQTNAAQATAAAAAARPAVAPNLGDSQWAQALGQQMVRLSTQGSQTAELDLNPPNLGPLKVVLNVVNDQAQA
QFVSPHQAVRAAVEAALPHLRTSMAEAGIQLGQTSVGSDGFAQAGNGGQQQQRQPGSGSAFAQAAGLTQDAPVQATAAAP
RAPRVLARGEVDTFA
>Mature_495_residues
MIDISQLIGNTANAALKTLTQSNAASTAAADAKAFQDALSRARDSAPQSAQPVASKPRDSSQTSAPKEDASQNTRQQTTQ
ASTSGASSTPQQKDNGKTNATTGKKDDSTQASDDGSTPSSDAQAAAAALAAAMLAQQAAPATTALTGGAAADAAANGAGL
AGANGLPLAAQTAATTTATQANPATDAATLLAQAADAQSATTTAGTAAKGTTPSPADTLATIAQQRAAAQNSTPTAADKI
AAALNNPAQTGTQTGAQDARGQNAGQQQTGLGHGAQPTLQADTTQASQTPIATPYAMAQASARTGEGTDTGATNPSSAAM
LASALSAQSQTNAAQATAAAAAARPAVAPNLGDSQWAQALGQQMVRLSTQGSQTAELDLNPPNLGPLKVVLNVVNDQAQA
QFVSPHQAVRAAVEAALPHLRTSMAEAGIQLGQTSVGSDGFAQAGNGGQQQQRQPGSGSAFAQAAGLTQDAPVQATAAAP
RAPRVLARGEVDTFA

Specific function: Controls the length of the flagellar hook [H]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliK family [H]

Homologues:

Organism=Escherichia coli, GI1788253, Length=128, Percent_Identity=45.3125, Blast_Score=106, Evalue=4e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001635
- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 48539; Mature: 48539

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDISQLIGNTANAALKTLTQSNAASTAAADAKAFQDALSRARDSAPQSAQPVASKPRDS
CCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQTSAPKEDASQNTRQQTTQASTSGASSTPQQKDNGKTNATTGKKDDSTQASDDGSTPSS
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DAQAAAAALAAAMLAQQAAPATTALTGGAAADAAANGAGLAGANGLPLAAQTAATTTATQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
ANPATDAATLLAQAADAQSATTTAGTAAKGTTPSPADTLATIAQQRAAAQNSTPTAADKI
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AAALNNPAQTGTQTGAQDARGQNAGQQQTGLGHGAQPTLQADTTQASQTPIATPYAMAQA
HHHHCCCHHHCCCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SARTGEGTDTGATNPSSAAMLASALSAQSQTNAAQATAAAAAARPAVAPNLGDSQWAQAL
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GQQMVRLSTQGSQTAELDLNPPNLGPLKVVLNVVNDQAQAQFVSPHQAVRAAVEAALPHL
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
RTSMAEAGIQLGQTSVGSDGFAQAGNGGQQQQRQPGSGSAFAQAAGLTQDAPVQATAAAP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCHHCCCC
RAPRVLARGEVDTFA
CCCCEEECCCCCCCC
>Mature Secondary Structure
MIDISQLIGNTANAALKTLTQSNAASTAAADAKAFQDALSRARDSAPQSAQPVASKPRDS
CCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQTSAPKEDASQNTRQQTTQASTSGASSTPQQKDNGKTNATTGKKDDSTQASDDGSTPSS
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DAQAAAAALAAAMLAQQAAPATTALTGGAAADAAANGAGLAGANGLPLAAQTAATTTATQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
ANPATDAATLLAQAADAQSATTTAGTAAKGTTPSPADTLATIAQQRAAAQNSTPTAADKI
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AAALNNPAQTGTQTGAQDARGQNAGQQQTGLGHGAQPTLQADTTQASQTPIATPYAMAQA
HHHHCCCHHHCCCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SARTGEGTDTGATNPSSAAMLASALSAQSQTNAAQATAAAAAARPAVAPNLGDSQWAQAL
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GQQMVRLSTQGSQTAELDLNPPNLGPLKVVLNVVNDQAQAQFVSPHQAVRAAVEAALPHL
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
RTSMAEAGIQLGQTSVGSDGFAQAGNGGQQQQRQPGSGSAFAQAAGLTQDAPVQATAAAP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCHHCCCC
RAPRVLARGEVDTFA
CCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8631687; 11677609; 1646201; 2656645 [H]