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The map label for this gene is fliJ [H]

Identifier: 94314184

GI number: 94314184

Start: 1963778

End: 1964230

Strand: Direct

Name: fliJ [H]

Synonym: Rmet_5265

Alternate gene names: 94314184

Gene position: 1963778-1964230 (Clockwise)

Preceding gene: 94314183

Following gene: 94314185

Centisome position: 76.11

GC content: 66.67

Gene sequence:

>453_bases
ATGGTTAAGCACAATCCGCTGAATACTCTGGCCGATCTGGCCCAGGACGACACGGACAAGGCCGCGCGCGAACTGGGCCG
TCTGCAGGGGCTGCGCACCCAGGCCGAGCAACAGCTCAACGCGCTGACACAGTACCGGCAGGAGTACCGGATCCGGATGC
AAGCGATCGCCGCCGAAGGCATGTCGTCGAGCCGCTGGCACGACTTCTCTCGCTTCCTCGATTCGCTTGACCACGCCATC
CGTCAGCAGACCAATGCGCTGGCCAAGGCCGAGGCCGACCTGCTGGCCGGACGCGCAAACTGGCAGCAGCAGAAGCGCCG
CCAGAACTCGTTCGATACGTTGATCACGCGGGCGGAAACACGCGAGCAGCAAGTCTCCGCCCGGCGCGAGCAGCGCGCCA
ACGACGAATACGCGGCCCGCATCGCCCGCCAGCCGGCGGCCGGCCGAACCTGA

Upstream 100 bases:

>100_bases
TATCCGCGCATGGAGGCCTTCCTGCAGCAGGACATTCACGAACGCGCCGGCTACGACGCCTCGATCGCCCAGTTGCACGA
TCTCTTCGAGAGGACGCATC

Downstream 100 bases:

>100_bases
TCCGACGAAGAGACCATGATCGATATCAGCCAGCTTATCGGTAACACCGCCAACGCCGCCCTCAAGACCCTGACGCAGTC
CAACGCCGCCAGCACCGCCG

Product: Flagellar export protein FliJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVKHNPLNTLADLAQDDTDKAARELGRLQGLRTQAEQQLNALTQYRQEYRIRMQAIAAEGMSSSRWHDFSRFLDSLDHAI
RQQTNALAKAEADLLAGRANWQQQKRRQNSFDTLITRAETREQQVSARREQRANDEYAARIARQPAAGRT

Sequences:

>Translated_150_residues
MVKHNPLNTLADLAQDDTDKAARELGRLQGLRTQAEQQLNALTQYRQEYRIRMQAIAAEGMSSSRWHDFSRFLDSLDHAI
RQQTNALAKAEADLLAGRANWQQQKRRQNSFDTLITRAETREQQVSARREQRANDEYAARIARQPAAGRT
>Mature_150_residues
MVKHNPLNTLADLAQDDTDKAARELGRLQGLRTQAEQQLNALTQYRQEYRIRMQAIAAEGMSSSRWHDFSRFLDSLDHAI
RQQTNALAKAEADLLAGRANWQQQKRRQNSFDTLITRAETREQQVSARREQRANDEYAARIARQPAAGRT

Specific function: Flagellar protein that affects chemotactic events [H]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliJ family [H]

Homologues:

Organism=Escherichia coli, GI1788252, Length=146, Percent_Identity=33.5616438356164, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018006
- InterPro:   IPR012823 [H]

Pfam domain/function: PF02050 FliJ [H]

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHNPLNTLADLAQDDTDKAARELGRLQGLRTQAEQQLNALTQYRQEYRIRMQAIAAEG
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MSSSRWHDFSRFLDSLDHAIRQQTNALAKAEADLLAGRANWQQQKRRQNSFDTLITRAET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
REQQVSARREQRANDEYAARIARQPAAGRT
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVKHNPLNTLADLAQDDTDKAARELGRLQGLRTQAEQQLNALTQYRQEYRIRMQAIAAEG
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MSSSRWHDFSRFLDSLDHAIRQQTNALAKAEADLLAGRANWQQQKRRQNSFDTLITRAET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
REQQVSARREQRANDEYAARIARQPAAGRT
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]