| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is yebQ [C]
Identifier: 94314163
GI number: 94314163
Start: 1942311
End: 1943852
Strand: Reverse
Name: yebQ [C]
Synonym: Rmet_5244
Alternate gene names: 94314163
Gene position: 1943852-1942311 (Counterclockwise)
Preceding gene: 94314164
Following gene: 94314149
Centisome position: 75.34
GC content: 67.64
Gene sequence:
>1542_bases ATGTCCGCTCCGCAAGCGCCCTCCGCCCCGCATTCACCCCCAGACGTGCCCGTGATGCAGGTTATCTTCGGCCTGATGCT GGCCATCATGCTGGGTGCCCTCGAACAATCGATCGTGGCCGTGGTCCTGCCCGAGATCGCCTTGCAGCTCAACGGTTTCG AGGACATGGCGTGGGTGATCTCCGCCTATCTGGTGGCGTCCACCGTGGTTACGCCGATCTACGGCAAGCTGTCCGACGTG CTCGGGCGCCGCTCGGTGCTGACGTTCTCGATCGTGCTGTTCGTGCTGGCGTCGATCGCCTGCGCGATGGCTACGACGAT GCCGATGCTGATCGTTGCGCGCATTCTGCAGGGCCTTGGCGGTGGCGGCCTGATCTCGGTATCGCAAGCAACGATCGCCG ACGTGGTGCCACTACGTGAACGCGGCAAGTACCAGGGCTACGTCAGCGGCGTCTGGGCCGTGGCCAGCATGGCCGGGCCC GTGATTGGCGGCTACCTTGCGCACTTCCTCTCATGGCGCTGGATTTTCTGGATCAACATTCCGCTGGGGCTGATCGCGCT GATCGTGGTGCGCCGGGCGCTGCGGCATCTGCCGGTCAGCGGACGCAAGCATCGCATCGACTACCTTGGCGCGCTGCTGT TTGGTGGCGGCCTGTCCGGCGTGCTGGTGTTCCTGACGCGGATGGGGCAGGGCCACTCGCCGCTGGAGCCGCAGACGATC GGCCTGCTGGCTGCCGGGCTGATCGGTCTGGTGCTTTTCATCTGGCAGGAGCGGCGTGCCGTCGACCCGGTGATTCCGCT GAAGATGCTCGCCGTGCCGACCGTCGCGATCTGCTGCCTGACGCTGTTCCTGTGCTTCTTCCAGTTGATCGCGATGTCGG TGCTGCTGCCGCTGCGCTTCCAGGTCGTGGGCGGCGCGGGGGCCGACACCGCCGCGCTGCGGCTGGTGCCGCTGACGCTG GCCATTCCGTTCGGCGCCTATGCGTCGGGCCGGCTGATGTCGTGGAGCGGGCGTTACAAGCCGCTGCAACTGGCTGGCTG TCTGGTGGCGCCGATTGCCATCGTCGGGCTGGCCTTTGTGCCGCCGCAGGCGGTGGTGCCGGCCGCGCTGGTGATGATCG TCCTGGGCCTGTCAATCGGCCTGCAACTGCCGAGCGGGCTGGTGGCCACGCAGAACTCGGTGCCGCCGCAGCAGGTTGGC ATCGCCACCGCGCTGACCGCCTTCTCGCGCCTGCTTGGTGGCGCAGTGGGCGTGGCGGTGCTGACCACGGTGCTGATCGC GCTGCTACGCCATAGCGGCATGGCGGTCAGTGACCTGCATGGCGGCGAGGATGTGCTGATGAGCATGTTCCGGCGGGCCA TGGATGCGGGGGATCAGGGCGATGCTGCCGCGGTGCGCGAGGCGGCGGAGCATGCCTTCCGCCTGCTGTTCCTGATGAGC GCGGGCGTGTCGTTGATCGCGCCGTTCTTCGTCATGCGGCTCAAGGAGAAGACGCTGCGCGGCAGCCCGGCCGGGGCAGC GGCGTCCGCCGCTGCCGAGTGA
Upstream 100 bases:
>100_bases CGACAAGCACGGTTTGAAGCGCTCGCATAAAATAGCGGCTCTTCTTGACCAACAAGAGCAGGCAGGCCGTCCGGCCAATG CCTGCCGTGCAGGCTCCTCC
Downstream 100 bases:
>100_bases TGCGGCGCGGGTTGCCCGCGTCCGCCATTCAGCTACGTGCGCGCAGTTCGTACACCCCGAGCCACGACGCTGTCTTGCCG ACCCGGCCGCCGGATGCGCT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MSAPQAPSAPHSPPDVPVMQVIFGLMLAIMLGALEQSIVAVVLPEIALQLNGFEDMAWVISAYLVASTVVTPIYGKLSDV LGRRSVLTFSIVLFVLASIACAMATTMPMLIVARILQGLGGGGLISVSQATIADVVPLRERGKYQGYVSGVWAVASMAGP VIGGYLAHFLSWRWIFWINIPLGLIALIVVRRALRHLPVSGRKHRIDYLGALLFGGGLSGVLVFLTRMGQGHSPLEPQTI GLLAAGLIGLVLFIWQERRAVDPVIPLKMLAVPTVAICCLTLFLCFFQLIAMSVLLPLRFQVVGGAGADTAALRLVPLTL AIPFGAYASGRLMSWSGRYKPLQLAGCLVAPIAIVGLAFVPPQAVVPAALVMIVLGLSIGLQLPSGLVATQNSVPPQQVG IATALTAFSRLLGGAVGVAVLTTVLIALLRHSGMAVSDLHGGEDVLMSMFRRAMDAGDQGDAAAVREAAEHAFRLLFLMS AGVSLIAPFFVMRLKEKTLRGSPAGAAASAAAE
Sequences:
>Translated_513_residues MSAPQAPSAPHSPPDVPVMQVIFGLMLAIMLGALEQSIVAVVLPEIALQLNGFEDMAWVISAYLVASTVVTPIYGKLSDV LGRRSVLTFSIVLFVLASIACAMATTMPMLIVARILQGLGGGGLISVSQATIADVVPLRERGKYQGYVSGVWAVASMAGP VIGGYLAHFLSWRWIFWINIPLGLIALIVVRRALRHLPVSGRKHRIDYLGALLFGGGLSGVLVFLTRMGQGHSPLEPQTI GLLAAGLIGLVLFIWQERRAVDPVIPLKMLAVPTVAICCLTLFLCFFQLIAMSVLLPLRFQVVGGAGADTAALRLVPLTL AIPFGAYASGRLMSWSGRYKPLQLAGCLVAPIAIVGLAFVPPQAVVPAALVMIVLGLSIGLQLPSGLVATQNSVPPQQVG IATALTAFSRLLGGAVGVAVLTTVLIALLRHSGMAVSDLHGGEDVLMSMFRRAMDAGDQGDAAAVREAAEHAFRLLFLMS AGVSLIAPFFVMRLKEKTLRGSPAGAAASAAAE >Mature_512_residues SAPQAPSAPHSPPDVPVMQVIFGLMLAIMLGALEQSIVAVVLPEIALQLNGFEDMAWVISAYLVASTVVTPIYGKLSDVL GRRSVLTFSIVLFVLASIACAMATTMPMLIVARILQGLGGGGLISVSQATIADVVPLRERGKYQGYVSGVWAVASMAGPV IGGYLAHFLSWRWIFWINIPLGLIALIVVRRALRHLPVSGRKHRIDYLGALLFGGGLSGVLVFLTRMGQGHSPLEPQTIG LLAAGLIGLVLFIWQERRAVDPVIPLKMLAVPTVAICCLTLFLCFFQLIAMSVLLPLRFQVVGGAGADTAALRLVPLTLA IPFGAYASGRLMSWSGRYKPLQLAGCLVAPIAIVGLAFVPPQAVVPAALVMIVLGLSIGLQLPSGLVATQNSVPPQQVGI ATALTAFSRLLGGAVGVAVLTTVLIALLRHSGMAVSDLHGGEDVLMSMFRRAMDAGDQGDAAAVREAAEHAFRLLFLMSA GVSLIAPFFVMRLKEKTLRGSPAGAAASAAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=418, Percent_Identity=31.1004784688995, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789042, Length=476, Percent_Identity=24.5798319327731, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1790195, Length=414, Percent_Identity=28.5024154589372, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788710, Length=451, Percent_Identity=25.2771618625277, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1788392, Length=206, Percent_Identity=34.4660194174757, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=28.2352941176471, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082159, Length=107, Percent_Identity=40.1869158878505, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788509, Length=160, Percent_Identity=31.875, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=346, Percent_Identity=26.3005780346821, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322958, Length=551, Percent_Identity=23.4119782214156, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319770, Length=407, Percent_Identity=29.2383292383292, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6325455, Length=517, Percent_Identity=22.4371373307544, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6321663, Length=149, Percent_Identity=31.5436241610738, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319783, Length=449, Percent_Identity=23.8307349665924, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322070, Length=181, Percent_Identity=29.8342541436464, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322071, Length=339, Percent_Identity=25.9587020648968, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324264, Length=137, Percent_Identity=30.6569343065693, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 - InterPro: IPR011991 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53796; Mature: 53665
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPQAPSAPHSPPDVPVMQVIFGLMLAIMLGALEQSIVAVVLPEIALQLNGFEDMAWVI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SAYLVASTVVTPIYGKLSDVLGRRSVLTFSIVLFVLASIACAMATTMPMLIVARILQGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGLISVSQATIADVVPLRERGKYQGYVSGVWAVASMAGPVIGGYLAHFLSWRWIFWINI CCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC PLGLIALIVVRRALRHLPVSGRKHRIDYLGALLFGGGLSGVLVFLTRMGQGHSPLEPQTI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH GLLAAGLIGLVLFIWQERRAVDPVIPLKMLAVPTVAICCLTLFLCFFQLIAMSVLLPLRF HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVVGGAGADTAALRLVPLTLAIPFGAYASGRLMSWSGRYKPLQLAGCLVAPIAIVGLAFV HEECCCCCCHHHHHHHHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC PPQAVVPAALVMIVLGLSIGLQLPSGLVATQNSVPPQQVGIATALTAFSRLLGGAVGVAV CCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTTVLIALLRHSGMAVSDLHGGEDVLMSMFRRAMDAGDQGDAAAVREAAEHAFRLLFLMS HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGVSLIAPFFVMRLKEKTLRGSPAGAAASAAAE CCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure SAPQAPSAPHSPPDVPVMQVIFGLMLAIMLGALEQSIVAVVLPEIALQLNGFEDMAWVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SAYLVASTVVTPIYGKLSDVLGRRSVLTFSIVLFVLASIACAMATTMPMLIVARILQGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGLISVSQATIADVVPLRERGKYQGYVSGVWAVASMAGPVIGGYLAHFLSWRWIFWINI CCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC PLGLIALIVVRRALRHLPVSGRKHRIDYLGALLFGGGLSGVLVFLTRMGQGHSPLEPQTI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH GLLAAGLIGLVLFIWQERRAVDPVIPLKMLAVPTVAICCLTLFLCFFQLIAMSVLLPLRF HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVVGGAGADTAALRLVPLTLAIPFGAYASGRLMSWSGRYKPLQLAGCLVAPIAIVGLAFV HEECCCCCCHHHHHHHHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC PPQAVVPAALVMIVLGLSIGLQLPSGLVATQNSVPPQQVGIATALTAFSRLLGGAVGVAV CCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTTVLIALLRHSGMAVSDLHGGEDVLMSMFRRAMDAGDQGDAAAVREAAEHAFRLLFLMS HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGVSLIAPFFVMRLKEKTLRGSPAGAAASAAAE CCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]