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The map label for this gene is dapA [H]

Identifier: 94314121

GI number: 94314121

Start: 1897112

End: 1898014

Strand: Direct

Name: dapA [H]

Synonym: Rmet_5202

Alternate gene names: 94314121

Gene position: 1897112-1898014 (Clockwise)

Preceding gene: 94314120

Following gene: 94314122

Centisome position: 73.53

GC content: 65.56

Gene sequence:

>903_bases
ATGCCCACCCAACAACTACGGGGCGTGTTCACCCCCGTCGTCACCCCGTTTCATGAAGACCTGTCGATCAACCTGCCCGC
TTTCGTCGCGCACTGCAAGCGGTTGATCGCCGATGGCGCCGGTATCGCCATCTCGGGCACCAACAGCGAAGCCTGCTCGG
AAACGTTCGAGGAACGCATCGCGCTCGTCGACGCCGCCATCGATGCGGGAATCCCCGGCGAGCGCGTGCTGGTGGGAACC
GGTTGTTGCGCGATCGACGATGCCGTGGTGCTGACGCGCCACGCCATCGAACGTGGTTGCGCGGGTGTGCTGGTGCTGCC
ACCGTTCTTCTTCAAGAACGTGAGCGAAGACGGTGTCTTCGCCTACTACAGCGAACTGATCGCGCGCGTCAACGATCCCG
CCCTGCGCATCGTGCTGTACCACATCCCTGCGATGTCTGGCGTGCCCATCTCGCTGTCGCTGATCGAGCGCCTCGTGCAG
GCATTCCCAACGCATATCGTGGGCATCAAGGACAGCAGCGGCAACTGGGACAACCTCGTGGCCATGCTCGAGCGTTTCCC
GTCGCTCTCCATTTTTCCGGCCTCGGAACTGCTGATGCTGCGCAGTCTGTCGCTGGGTGCCGCCGGCTGCATCTCCGCCA
CCAACAACATCAATGCGCGCGCCATCGCACAGGCATTCGCCGACGCGGCCGATGCAGCGCGCCTGCAGCCAGCGATCGCC
GCGGTGCGCAGCACGGTGGAGCGATTCCCGATGGTGGCCGCCGTCAAGCACACGCTGGCGCAGCAGACCAGCGACCCCAG
CTGGCGTCACGTGCGCCCACCCCTTGTGCCGCTGGCGGCGGATGCCTCCACCGAGTTGCTGCAGGCACTGGCCGGCATTC
CCGCCATGGAGGCGCGCGCATGA

Upstream 100 bases:

>100_bases
TTTCTGGAGACGGTCACGCGGATAACCACGTAGCTCTCAACCCACCGACCCTACCGCCCCTACCAGACAAGCATCAAAGA
AAAAAACAGGAGACAAAGTC

Downstream 100 bases:

>100_bases
ATCCGCCGCCACTTGCGGCGTACTCGCCTGCGCGCCGGGCCGGTGGCCATGTCCACCTGGCCGGCATGAGCCCGCGCACG
CACGATGGATGCGCGGGCGT

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPTQQLRGVFTPVVTPFHEDLSINLPAFVAHCKRLIADGAGIAISGTNSEACSETFEERIALVDAAIDAGIPGERVLVGT
GCCAIDDAVVLTRHAIERGCAGVLVLPPFFFKNVSEDGVFAYYSELIARVNDPALRIVLYHIPAMSGVPISLSLIERLVQ
AFPTHIVGIKDSSGNWDNLVAMLERFPSLSIFPASELLMLRSLSLGAAGCISATNNINARAIAQAFADAADAARLQPAIA
AVRSTVERFPMVAAVKHTLAQQTSDPSWRHVRPPLVPLAADASTELLQALAGIPAMEARA

Sequences:

>Translated_300_residues
MPTQQLRGVFTPVVTPFHEDLSINLPAFVAHCKRLIADGAGIAISGTNSEACSETFEERIALVDAAIDAGIPGERVLVGT
GCCAIDDAVVLTRHAIERGCAGVLVLPPFFFKNVSEDGVFAYYSELIARVNDPALRIVLYHIPAMSGVPISLSLIERLVQ
AFPTHIVGIKDSSGNWDNLVAMLERFPSLSIFPASELLMLRSLSLGAAGCISATNNINARAIAQAFADAADAARLQPAIA
AVRSTVERFPMVAAVKHTLAQQTSDPSWRHVRPPLVPLAADASTELLQALAGIPAMEARA
>Mature_299_residues
PTQQLRGVFTPVVTPFHEDLSINLPAFVAHCKRLIADGAGIAISGTNSEACSETFEERIALVDAAIDAGIPGERVLVGTG
CCAIDDAVVLTRHAIERGCAGVLVLPPFFFKNVSEDGVFAYYSELIARVNDPALRIVLYHIPAMSGVPISLSLIERLVQA
FPTHIVGIKDSSGNWDNLVAMLERFPSLSIFPASELLMLRSLSLGAAGCISATNNINARAIAQAFADAADAARLQPAIAA
VRSTVERFPMVAAVKHTLAQQTSDPSWRHVRPPLVPLAADASTELLQALAGIPAMEARA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI13540533, Length=230, Percent_Identity=25.6521739130435, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI31543060, Length=250, Percent_Identity=23.6, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87082415, Length=302, Percent_Identity=27.4834437086093, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786463, Length=290, Percent_Identity=27.9310344827586, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788823, Length=227, Percent_Identity=24.6696035242291, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789620, Length=237, Percent_Identity=24.8945147679325, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002220
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31842; Mature: 31711

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTQQLRGVFTPVVTPFHEDLSINLPAFVAHCKRLIADGAGIAISGTNSEACSETFEERI
CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
ALVDAAIDAGIPGERVLVGTGCCAIDDAVVLTRHAIERGCAGVLVLPPFFFKNVSEDGVF
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHH
AYYSELIARVNDPALRIVLYHIPAMSGVPISLSLIERLVQAFPTHIVGIKDSSGNWDNLV
HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHH
AMLERFPSLSIFPASELLMLRSLSLGAAGCISATNNINARAIAQAFADAADAARLQPAIA
HHHHHCCCCEECCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVRSTVERFPMVAAVKHTLAQQTSDPSWRHVRPPLVPLAADASTELLQALAGIPAMEARA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PTQQLRGVFTPVVTPFHEDLSINLPAFVAHCKRLIADGAGIAISGTNSEACSETFEERI
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
ALVDAAIDAGIPGERVLVGTGCCAIDDAVVLTRHAIERGCAGVLVLPPFFFKNVSEDGVF
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHH
AYYSELIARVNDPALRIVLYHIPAMSGVPISLSLIERLVQAFPTHIVGIKDSSGNWDNLV
HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHH
AMLERFPSLSIFPASELLMLRSLSLGAAGCISATNNINARAIAQAFADAADAARLQPAIA
HHHHHCCCCEECCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVRSTVERFPMVAAVKHTLAQQTSDPSWRHVRPPLVPLAADASTELLQALAGIPAMEARA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA