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The map label for this gene is amnD [H]

Identifier: 94314122

GI number: 94314122

Start: 1898011

End: 1898454

Strand: Direct

Name: amnD [H]

Synonym: Rmet_5203

Alternate gene names: 94314122

Gene position: 1898011-1898454 (Clockwise)

Preceding gene: 94314121

Following gene: 94314123

Centisome position: 73.56

GC content: 67.57

Gene sequence:

>444_bases
ATGAATCCGCCGCCACTTGCGGCGTACTCGCCTGCGCGCCGGGCCGGTGGCCATGTCCACCTGGCCGGCATGAGCCCGCG
CACGCACGATGGATGCGCGGGCGTGTCGACCGGCGCCAACGGCGAGCGTGTCTATGACCTCGCCGCGCAGACCGAGTGCG
TGCTCGACAAGATCGATCGTGCCTTACAGGCGGAAGGACTCGAACTGGTCAACTGCGTGACGATGACTTGCTATCTGGTC
GACATGCGCGACTACGCCGCATTCAATGCGGCCTACGATGCCATCTGCATGCGCCGCTTTTCCAGCGCGGGCCAGCCCTT
GCCGGCGCGTACTTGTGTGGCTGTGGCCGCGCTGCCGCACCCTGACATGCGCGTGGAGATCACCGCGACGGCCTGGGGGC
CGGACACGCCGGACAGCCCAAGCAACGCACGGGGTGCCGCATGA

Upstream 100 bases:

>100_bases
GCTGGCGTCACGTGCGCCCACCCCTTGTGCCGCTGGCGGCGGATGCCTCCACCGAGTTGCTGCAGGCACTGGCCGGCATT
CCCGCCATGGAGGCGCGCGC

Downstream 100 bases:

>100_bases
GTGCGCCAGTCGCATCCGATGTGCTCGACACCCTGTTCCTGACGGCCCGCAGCCACAACGGCTGGCTCGACGGGGACGTC
TCCGACGCCACATTGACCCG

Product: putative 2-aminomuconate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNPPPLAAYSPARRAGGHVHLAGMSPRTHDGCAGVSTGANGERVYDLAAQTECVLDKIDRALQAEGLELVNCVTMTCYLV
DMRDYAAFNAAYDAICMRRFSSAGQPLPARTCVAVAALPHPDMRVEITATAWGPDTPDSPSNARGAA

Sequences:

>Translated_147_residues
MNPPPLAAYSPARRAGGHVHLAGMSPRTHDGCAGVSTGANGERVYDLAAQTECVLDKIDRALQAEGLELVNCVTMTCYLV
DMRDYAAFNAAYDAICMRRFSSAGQPLPARTCVAVAALPHPDMRVEITATAWGPDTPDSPSNARGAA
>Mature_147_residues
MNPPPLAAYSPARRAGGHVHLAGMSPRTHDGCAGVSTGANGERVYDLAAQTECVLDKIDRALQAEGLELVNCVTMTCYLV
DMRDYAAFNAAYDAICMRRFSSAGQPLPARTCVAVAALPHPDMRVEITATAWGPDTPDSPSNARGAA

Specific function: Involved in the modified meta-cleavage pathway for the 2-aminophenol catabolism. Only active toward 2-aminomuconic acid [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2-aminomuconate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI87082396, Length=91, Percent_Identity=38.4615384615385, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: =3.5.99.5 [H]

Molecular weight: Translated: 15490; Mature: 15490

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPPLAAYSPARRAGGHVHLAGMSPRTHDGCAGVSTGANGERVYDLAAQTECVLDKIDR
CCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
ALQAEGLELVNCVTMTCYLVDMRDYAAFNAAYDAICMRRFSSAGQPLPARTCVAVAALPH
HHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCC
PDMRVEITATAWGPDTPDSPSNARGAA
CCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPPPLAAYSPARRAGGHVHLAGMSPRTHDGCAGVSTGANGERVYDLAAQTECVLDKIDR
CCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
ALQAEGLELVNCVTMTCYLVDMRDYAAFNAAYDAICMRRFSSAGQPLPARTCVAVAALPH
HHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCC
PDMRVEITATAWGPDTPDSPSNARGAA
CCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9169437; 11081795 [H]