| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is bugT
Identifier: 94314068
GI number: 94314068
Start: 1847569
End: 1848555
Strand: Direct
Name: bugT
Synonym: Rmet_5149
Alternate gene names: NA
Gene position: 1847569-1848555 (Clockwise)
Preceding gene: 94314055
Following gene: 94314069
Centisome position: 71.61
GC content: 63.83
Gene sequence:
>987_bases ATGAAACTCACATCAGCCACGCGCCGGTGGGCCATGCTGTGCGCGCTCGTGGTGACGATTGGCGGCGCACTGACGCCGAT GGACGCCAGAAGCGAATACCCGGACAAGCCCATCAAGCTGGTAGTGTCCTTTCCGCCGGGGAGCGGCACGGACTCCAACG CCCGATATCTCGCACGCAAGATGGAGGAACGGCTGGGAAAGCCGGTCGTCGTCGAGAACCGTCCGGGTGGCAACAGCTTT ATCGCCGCGCAAACGGTGACCCGCGCCGAACCCGACGGATATACGCTGCTGCTGGCCAGCAACTCGCCGGTGGCGACCAA TGTCGCGATGTTCCGCAAGCTCCCCTATGACCCCGTCAGCGAACTCGCACCCATTGCCCGTCTGGGAGTCGGCGCCATGG CGCTGGTCGTGAGCGCGACGTCTCGCTACCAAACCGTCGACGCGCTGTTGAGTGCGGCACGCGAACACCCCGGCACTCTC AACTATGGCGCGGGCAGCGCCTCGTACCAGATCGCGACCGAGCTCTTTCTGGCAATGGGTCACATCAAGGCCAACCATGT GCCATACAAGGGCGCGGCGCCTGCGCTGACCGATCTGGCTGCAGGACAGGTGGATTTCGTGTTTGCCGACTATGGCGCGG TACTTCCGCTCCTGAACGGCGGCAAGCTCCGGCTGCTCGCGGTCACCAGCGACAAGCGGCTCGGCAGCCAGCCCAACACG CCCACGCTTCAGGAAAGCGGATTCCCCGGCTACTTCATGGTGAACTGGACCGCCGCGTTCGCACCGGCGAATACGCCAAA GCCGGTCATCGCCAAGCTGGAAATGCTGATGCTGGACATCTACCGGACACCAGAAACCAGCGAATTCCTGTCGCGCACCA GTTGGGACGTCTTTGTCGGCGACGCGAAAGCGCTGAGGACCTTCCAGCTCGCGGAGATCAAGAAGTGGTCGGACGCCGCC GAGCGCGCAGGCGTGCCGAAACAGTAG
Upstream 100 bases:
>100_bases CGAAAATCGTCGTTTCTATATTGGACAGCGCCATAGCGCTGCGCATAGTCTCTGCTGACGCTTCGCGTACTAGACGAAGC CGGATAACACGGAGACAGGA
Downstream 100 bases:
>100_bases ACGCAACGATAGACGAACCGATCCATCCAATCCCGGAGACCTACCATGTCGAACTTCCTGTCCTACGAACAAGACGGGCA CGTCGTCACGTTGACGATGT
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKLTSATRRWAMLCALVVTIGGALTPMDARSEYPDKPIKLVVSFPPGSGTDSNARYLARKMEERLGKPVVVENRPGGNSF IAAQTVTRAEPDGYTLLLASNSPVATNVAMFRKLPYDPVSELAPIARLGVGAMALVVSATSRYQTVDALLSAAREHPGTL NYGAGSASYQIATELFLAMGHIKANHVPYKGAAPALTDLAAGQVDFVFADYGAVLPLLNGGKLRLLAVTSDKRLGSQPNT PTLQESGFPGYFMVNWTAAFAPANTPKPVIAKLEMLMLDIYRTPETSEFLSRTSWDVFVGDAKALRTFQLAEIKKWSDAA ERAGVPKQ
Sequences:
>Translated_328_residues MKLTSATRRWAMLCALVVTIGGALTPMDARSEYPDKPIKLVVSFPPGSGTDSNARYLARKMEERLGKPVVVENRPGGNSF IAAQTVTRAEPDGYTLLLASNSPVATNVAMFRKLPYDPVSELAPIARLGVGAMALVVSATSRYQTVDALLSAAREHPGTL NYGAGSASYQIATELFLAMGHIKANHVPYKGAAPALTDLAAGQVDFVFADYGAVLPLLNGGKLRLLAVTSDKRLGSQPNT PTLQESGFPGYFMVNWTAAFAPANTPKPVIAKLEMLMLDIYRTPETSEFLSRTSWDVFVGDAKALRTFQLAEIKKWSDAA ERAGVPKQ >Mature_328_residues MKLTSATRRWAMLCALVVTIGGALTPMDARSEYPDKPIKLVVSFPPGSGTDSNARYLARKMEERLGKPVVVENRPGGNSF IAAQTVTRAEPDGYTLLLASNSPVATNVAMFRKLPYDPVSELAPIARLGVGAMALVVSATSRYQTVDALLSAAREHPGTL NYGAGSASYQIATELFLAMGHIKANHVPYKGAAPALTDLAAGQVDFVFADYGAVLPLLNGGKLRLLAVTSDKRLGSQPNT PTLQESGFPGYFMVNWTAAFAPANTPKPVIAKLEMLMLDIYRTPETSEFLSRTSWDVFVGDAKALRTFQLAEIKKWSDAA ERAGVPKQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35222; Mature: 35222
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTSATRRWAMLCALVVTIGGALTPMDARSEYPDKPIKLVVSFPPGSGTDSNARYLARK CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH MEERLGKPVVVENRPGGNSFIAAQTVTRAEPDGYTLLLASNSPVATNVAMFRKLPYDPVS HHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHH ELAPIARLGVGAMALVVSATSRYQTVDALLSAAREHPGTLNYGAGSASYQIATELFLAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHH HIKANHVPYKGAAPALTDLAAGQVDFVFADYGAVLPLLNGGKLRLLAVTSDKRLGSQPNT HHCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCHHEEECCCCEEEEEEECCCCCCCCCCC PTLQESGFPGYFMVNWTAAFAPANTPKPVIAKLEMLMLDIYRTPETSEFLSRTSWDVFVG CCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEC DAKALRTFQLAEIKKWSDAAERAGVPKQ CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLTSATRRWAMLCALVVTIGGALTPMDARSEYPDKPIKLVVSFPPGSGTDSNARYLARK CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH MEERLGKPVVVENRPGGNSFIAAQTVTRAEPDGYTLLLASNSPVATNVAMFRKLPYDPVS HHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHH ELAPIARLGVGAMALVVSATSRYQTVDALLSAAREHPGTLNYGAGSASYQIATELFLAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHH HIKANHVPYKGAAPALTDLAAGQVDFVFADYGAVLPLLNGGKLRLLAVTSDKRLGSQPNT HHCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCHHEEECCCCEEEEEEECCCCCCCCCCC PTLQESGFPGYFMVNWTAAFAPANTPKPVIAKLEMLMLDIYRTPETSEFLSRTSWDVFVG CCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEC DAKALRTFQLAEIKKWSDAAERAGVPKQ CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]