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The map label for this gene is ykvY [H]

Identifier: 94313976

GI number: 94313976

Start: 1744756

End: 1745949

Strand: Reverse

Name: ykvY [H]

Synonym: Rmet_5054

Alternate gene names: 94313976

Gene position: 1745949-1744756 (Counterclockwise)

Preceding gene: 94313977

Following gene: 94313975

Centisome position: 67.67

GC content: 64.32

Gene sequence:

>1194_bases
ATGCCACATCTGACCAAAGCCGTGCATGACTATCGCCTGGCCGCGATGCATCGCCTGATGGACCGCCTGCGCGTGGATGC
GCTGGTATTCGGCTCGCCGGACTTTTTCCAGTACGCGACCAATTTCCAGCTCGACGTGTGGCCATGGGAGCGTCCCGTGT
TCGTCGTTGTGCCGCGCAACGGCGAGACGTTCGCCGTGATGAACGAGCTATCGACCAACCACATGCGGTTTGCCACGGAG
AAGGGCACGGTATGGCTCTCGGACGTGACGTACTACGCCGAGCACCCCCGTGTGGCCAACCGGCTGGCGCTGCCGTCGCA
GTTGCCTGAAGTCGTGGCCGCATTGCTGGCCGCGAAAGGCCTCGGGATGTCGCGCATCGCCGTCGACGTTCAGCATCCGA
TCCTGACCGGCGCGCAGCGCTATCTTCCCGAGATGACGTTGCGTCCGGCAATGGCCGAGATGCGCAGCCTGCGCTGGGTC
AAGCACGCCGAGGAACTGCAGATCATGCGTGACCTCGCGGCCTTGACGGACTGGGTTCAGGACCGCTACCGAGAGAACAT
TCGTCCCGGCCGGCTGGTGCAGGAGCTCGATCACGCCATGGCGGCGTTGATGGTGGAAGAGGCTGCGCGACGTTTCGCGG
GAGAGGACTTCGAGATCATGAAATGCTGGACGCTCACGGGGGCTGCTTCGGCGTCCCCGCATGGCGACGGCGCAGCGTGC
GGCTCGCGCATCGCGAAGGGCGACACCATCGTCAACCTTGTATTGCCGAGATTGAACGGCCTTTACGTGGAGAACGAGCG
CACATGGTTCTGCGGTCAGCCCAGCGATGAGCAGGCCAGGTTCTACAGCGTTGCGGCGCGGGCCACGGATGCCGCCGTGG
CTGCGGCGGTGGTGGGGCGGCGTGTCTGCGACATGGATGCTGCCGCGCAGGCGGTGATCGAAAGCGCGGGGTGTGGCGAT
TACGTGTTCCACCGGACGGGCCATGCCGTGGGCCTGATGCTGCACGAGTATCCCGAGGATATGGCGTTCAACACCCGGCC
GCTGCTCGCTGGCGAAGTCTATTCGTCCGAGCCGGGACTGTATGTGTACGGCCTGGGTGGCTTCCGTCTGGACGATACCG
TCGTCGTTGGCGAGGTGCCGGAAGTCATCGTCAAAACGCCGAAGACGCTGAGCTACGCCACCGTGAGCCTGTAA

Upstream 100 bases:

>100_bases
GTGGAGCGCTACATGAAGCGCGACGCCGATGCCTGGGGGCCCGTCATCCGCCGTCTCAACATTTCTCTCTGATTACCCTG
ACCGCTCTGATAAGAAGACC

Downstream 100 bases:

>100_bases
CGAGCGTGGGCGCTGGCCGGGCGGCCCGGTCAGTGCCCTTCTGCACGCGATGCCGACCGCGGTTACACTACGCACCTTCA
ACCCATCACCGAGGTATTCG

Product: putative metalloprotease/Xaa-Pro dipeptidase type M24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MPHLTKAVHDYRLAAMHRLMDRLRVDALVFGSPDFFQYATNFQLDVWPWERPVFVVVPRNGETFAVMNELSTNHMRFATE
KGTVWLSDVTYYAEHPRVANRLALPSQLPEVVAALLAAKGLGMSRIAVDVQHPILTGAQRYLPEMTLRPAMAEMRSLRWV
KHAEELQIMRDLAALTDWVQDRYRENIRPGRLVQELDHAMAALMVEEAARRFAGEDFEIMKCWTLTGAASASPHGDGAAC
GSRIAKGDTIVNLVLPRLNGLYVENERTWFCGQPSDEQARFYSVAARATDAAVAAAVVGRRVCDMDAAAQAVIESAGCGD
YVFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSSEPGLYVYGLGGFRLDDTVVVGEVPEVIVKTPKTLSYATVSL

Sequences:

>Translated_397_residues
MPHLTKAVHDYRLAAMHRLMDRLRVDALVFGSPDFFQYATNFQLDVWPWERPVFVVVPRNGETFAVMNELSTNHMRFATE
KGTVWLSDVTYYAEHPRVANRLALPSQLPEVVAALLAAKGLGMSRIAVDVQHPILTGAQRYLPEMTLRPAMAEMRSLRWV
KHAEELQIMRDLAALTDWVQDRYRENIRPGRLVQELDHAMAALMVEEAARRFAGEDFEIMKCWTLTGAASASPHGDGAAC
GSRIAKGDTIVNLVLPRLNGLYVENERTWFCGQPSDEQARFYSVAARATDAAVAAAVVGRRVCDMDAAAQAVIESAGCGD
YVFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSSEPGLYVYGLGGFRLDDTVVVGEVPEVIVKTPKTLSYATVSL
>Mature_396_residues
PHLTKAVHDYRLAAMHRLMDRLRVDALVFGSPDFFQYATNFQLDVWPWERPVFVVVPRNGETFAVMNELSTNHMRFATEK
GTVWLSDVTYYAEHPRVANRLALPSQLPEVVAALLAAKGLGMSRIAVDVQHPILTGAQRYLPEMTLRPAMAEMRSLRWVK
HAEELQIMRDLAALTDWVQDRYRENIRPGRLVQELDHAMAALMVEEAARRFAGEDFEIMKCWTLTGAASASPHGDGAACG
SRIAKGDTIVNLVLPRLNGLYVENERTWFCGQPSDEQARFYSVAARATDAAVAAAVVGRRVCDMDAAAQAVIESAGCGDY
VFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSSEPGLYVYGLGGFRLDDTVVVGEVPEVIVKTPKTLSYATVSL

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Escherichia coli, GI1788728, Length=336, Percent_Identity=27.6785714285714, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 44085; Mature: 43954

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00491 PROLINE_PEPTIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLTKAVHDYRLAAMHRLMDRLRVDALVFGSPDFFQYATNFQLDVWPWERPVFVVVPRN
CCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCEEEECCCCCCEEEEECCC
GETFAVMNELSTNHMRFATEKGTVWLSDVTYYAEHPRVANRLALPSQLPEVVAALLAAKG
CCEEEEEECCCCCCEEEEECCCCEEEECEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCC
LGMSRIAVDVQHPILTGAQRYLPEMTLRPAMAEMRSLRWVKHAEELQIMRDLAALTDWVQ
CCHHHEEEEECCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRYRENIRPGRLVQELDHAMAALMVEEAARRFAGEDFEIMKCWTLTGAASASPHGDGAAC
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH
GSRIAKGDTIVNLVLPRLNGLYVENERTWFCGQPSDEQARFYSVAARATDAAVAAAVVGR
HHHHCCCCCEEEEHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVCDMDAAAQAVIESAGCGDYVFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSSEPGL
HHHCHHHHHHHHHHHCCCCCHHHHCCCCCEEHHHHHCCCCCCCCCCCCEECCCCCCCCCE
YVYGLGGFRLDDTVVVGEVPEVIVKTPKTLSYATVSL
EEEECCCEEECCEEEECCCCHHHHCCCCCCCEEEECC
>Mature Secondary Structure 
PHLTKAVHDYRLAAMHRLMDRLRVDALVFGSPDFFQYATNFQLDVWPWERPVFVVVPRN
CCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCEEEECCCCCCEEEEECCC
GETFAVMNELSTNHMRFATEKGTVWLSDVTYYAEHPRVANRLALPSQLPEVVAALLAAKG
CCEEEEEECCCCCCEEEEECCCCEEEECEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCC
LGMSRIAVDVQHPILTGAQRYLPEMTLRPAMAEMRSLRWVKHAEELQIMRDLAALTDWVQ
CCHHHEEEEECCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRYRENIRPGRLVQELDHAMAALMVEEAARRFAGEDFEIMKCWTLTGAASASPHGDGAAC
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH
GSRIAKGDTIVNLVLPRLNGLYVENERTWFCGQPSDEQARFYSVAARATDAAVAAAVVGR
HHHHCCCCCEEEEHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVCDMDAAAQAVIESAGCGDYVFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSSEPGL
HHHCHHHHHHHHHHHCCCCCHHHHCCCCCEEHHHHHCCCCCCCCCCCCEECCCCCCCCCE
YVYGLGGFRLDDTVVVGEVPEVIVKTPKTLSYATVSL
EEEECCCEEECCEEEECCCCHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]