| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is bug
Identifier: 94313960
GI number: 94313960
Start: 1724189
End: 1725235
Strand: Reverse
Name: bug
Synonym: Rmet_5038
Alternate gene names: NA
Gene position: 1725235-1724189 (Counterclockwise)
Preceding gene: 94313961
Following gene: 94313959
Centisome position: 66.87
GC content: 67.05
Gene sequence:
>1047_bases ATGCTGTTCCCTTGTTTCTCCTCGCGCCGGCAAACCACGCCGGCCGCTTCTGGCGGGATGCCGCGCGCGCAACGCGGCAG GCTTGCCGTCATCGCCGCGCTGTCCGCGCTGTGTCTGCCCGGCGGCATGTTGCCGACTTCCGCCTGGGCGGATAGTGGAA CGCCATTGAAGCTCGTCGTCACCTTCCCGCCCGGGGGCAGCACGGATATCGCCGCGCGCATCGTGCAGCCCAAGTTGGCG GAGGTGTTAGGGCGTCCCGTGGTGGTGGAGAACCGTCCCGGCGCCGCGAGTCAGGTCGCGACGCAGTACGTGGCGCGCTC CGCGCCGGACGGCAACACCTTGCTGATCAGCTTCGATACCCATGCGATCAATCCCATCGCGAAATCCCGGCTGCCGTATG ACACCTTCAAGGATTTCTCCGGTGTCACGCTGGCGCTGCGTTTCCCACTGGTGATCGGTGCCCATCCGTCGGTGCCCGGC AAGGACCTGCGCGGATTCCTGGATGCCGCGCGGCGCGCGCCCAATCAGTACAGCTACGCGTCCACCGGTCTTGGTTCGAT GAACCATCTCGTCGCGGAGGACTTGAAGCGTCAGGCCGGGGTGGAACTGCTGCACGTGCCTTACGCCGGCGGGGGGCCGG CTGTGCAGGCCGTGCTGGGGAACGTGTCGAGCCTGACGCTGCTGAGCTACGCCGCGCTCAAGGGCCAGATCGCTGCGGGG CGCATCAAGCCCCTCGCTGTGACCGGCGCCAACCGACTGCCTGATCTGCCCGATGTGCCGACGGTGGCGGAGTCCGGATT CCCGGGCTTCGAGGCGTACTCGTGGATTGGCGTGTTCGCGCCGTCCGGCACGCCACCGGCCGTGGCGCGCAAGCTGACCA GCGACTTCCAGGCCGCCCTTAATGATCCGGAGACCCACCGCAAGCTGACGCAGGCAGGGTTCGAGGTGATGGCCACCGAT GGTCCGGCGCTCGATCGTTACGCTCGCGAGCAGTATGAACGCTGGAAAGCCTTCGTCGTGAAGACCGGGCTGAAGCTGGA GGAGTAG
Upstream 100 bases:
>100_bases CGTCATCACGCAGGAGTTGCAGGATGCCGCGGCACCGGTCAGCCAGTGGATGGGCTGAGTCGATATCTGCTTTGCATCTG GATGACAGGAGGGCCGTACC
Downstream 100 bases:
>100_bases GAGTAGGAGTAGGAGTAGCGGAGCGGGGACGCTCCGGCTCGCCAGGCGGTTTCCATGCCACAATCCTGCGCACACTACAA CGCACAAAAGGAGACGGCAC
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLFPCFSSRRQTTPAASGGMPRAQRGRLAVIAALSALCLPGGMLPTSAWADSGTPLKLVVTFPPGGSTDIAARIVQPKLA EVLGRPVVVENRPGAASQVATQYVARSAPDGNTLLISFDTHAINPIAKSRLPYDTFKDFSGVTLALRFPLVIGAHPSVPG KDLRGFLDAARRAPNQYSYASTGLGSMNHLVAEDLKRQAGVELLHVPYAGGGPAVQAVLGNVSSLTLLSYAALKGQIAAG RIKPLAVTGANRLPDLPDVPTVAESGFPGFEAYSWIGVFAPSGTPPAVARKLTSDFQAALNDPETHRKLTQAGFEVMATD GPALDRYAREQYERWKAFVVKTGLKLEE
Sequences:
>Translated_348_residues MLFPCFSSRRQTTPAASGGMPRAQRGRLAVIAALSALCLPGGMLPTSAWADSGTPLKLVVTFPPGGSTDIAARIVQPKLA EVLGRPVVVENRPGAASQVATQYVARSAPDGNTLLISFDTHAINPIAKSRLPYDTFKDFSGVTLALRFPLVIGAHPSVPG KDLRGFLDAARRAPNQYSYASTGLGSMNHLVAEDLKRQAGVELLHVPYAGGGPAVQAVLGNVSSLTLLSYAALKGQIAAG RIKPLAVTGANRLPDLPDVPTVAESGFPGFEAYSWIGVFAPSGTPPAVARKLTSDFQAALNDPETHRKLTQAGFEVMATD GPALDRYAREQYERWKAFVVKTGLKLEE >Mature_348_residues MLFPCFSSRRQTTPAASGGMPRAQRGRLAVIAALSALCLPGGMLPTSAWADSGTPLKLVVTFPPGGSTDIAARIVQPKLA EVLGRPVVVENRPGAASQVATQYVARSAPDGNTLLISFDTHAINPIAKSRLPYDTFKDFSGVTLALRFPLVIGAHPSVPG KDLRGFLDAARRAPNQYSYASTGLGSMNHLVAEDLKRQAGVELLHVPYAGGGPAVQAVLGNVSSLTLLSYAALKGQIAAG RIKPLAVTGANRLPDLPDVPTVAESGFPGFEAYSWIGVFAPSGTPPAVARKLTSDFQAALNDPETHRKLTQAGFEVMATD GPALDRYAREQYERWKAFVVKTGLKLEE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36754; Mature: 36754
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPCFSSRRQTTPAASGGMPRAQRGRLAVIAALSALCLPGGMLPTSAWADSGTPLKLVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TFPPGGSTDIAARIVQPKLAEVLGRPVVVENRPGAASQVATQYVARSAPDGNTLLISFDT EECCCCCHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECC HAINPIAKSRLPYDTFKDFSGVTLALRFPLVIGAHPSVPGKDLRGFLDAARRAPNQYSYA HHCCHHHHHCCCCHHHHCCCCCEEEEEECEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH STGLGSMNHLVAEDLKRQAGVELLHVPYAGGGPAVQAVLGNVSSLTLLSYAALKGQIAAG HCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC RIKPLAVTGANRLPDLPDVPTVAESGFPGFEAYSWIGVFAPSGTPPAVARKLTSDFQAAL CCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHH NDPETHRKLTQAGFEVMATDGPALDRYAREQYERWKAFVVKTGLKLEE CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLFPCFSSRRQTTPAASGGMPRAQRGRLAVIAALSALCLPGGMLPTSAWADSGTPLKLVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TFPPGGSTDIAARIVQPKLAEVLGRPVVVENRPGAASQVATQYVARSAPDGNTLLISFDT EECCCCCHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECC HAINPIAKSRLPYDTFKDFSGVTLALRFPLVIGAHPSVPGKDLRGFLDAARRAPNQYSYA HHCCHHHHHCCCCHHHHCCCCCEEEEEECEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH STGLGSMNHLVAEDLKRQAGVELLHVPYAGGGPAVQAVLGNVSSLTLLSYAALKGQIAAG HCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC RIKPLAVTGANRLPDLPDVPTVAESGFPGFEAYSWIGVFAPSGTPPAVARKLTSDFQAAL CCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHH NDPETHRKLTQAGFEVMATDGPALDRYAREQYERWKAFVVKTGLKLEE CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]