| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313917
Identifier: 94313917
GI number: 94313917
Start: 1674947
End: 1675591
Strand: Direct
Name: 94313917
Synonym: Rmet_4995
Alternate gene names: NA
Gene position: 1674947-1675591 (Clockwise)
Preceding gene: 94313916
Following gene: 94313926
Centisome position: 64.92
GC content: 57.36
Gene sequence:
>645_bases TTGTCTCAGCCCTTGCGGTGGCCGACGGCGGCCACCGTTCTTTTTTTGGGGGCTCTTCGTCGATTTGCGGGGCCAGGGAG TGACTCAGAACAAGCCACAAGAGACCGTCACCATGGCGGAAAGCGGACATCCAGCCTGGAGGCTCACAGATCTGAAGCGT CAGTCAATTTGCGTTGCGCGGCGGCATATAATCCCGGGGCACAATTAGGAGGTGAAATGACCGTACCGTGTTCCGTGCAG TGCCTGTGTGGCGCCGTCAATATCAAGCTGAATGGCCAACCTCAGGCAAGGGCTAATTGCCACTGTCGGTCGTGCCAGGA TTTCTACGGGACTTCAATGTTGTCGGCGACTGCGTGGCTAGCTGAACAAGTCACCGTCGCCAGTGGTAGCGTGTCGAGCT TTTCGCACCCGTCAAAAGACTTGTCGCGAACATTCTGCTCCGGTTGCGGTGAGACGGTGTTTGGCACGAACCGGCTCGGC ATGCGCGTCCTTCCTAATACCATTTTCGCCCGAGCCGCTGGCGGTGAAGTGCCCGAGGAAATGCGACCGACGATGCATCT TTTTTACCGGCATCGGATTATCGACATACAGGACGAGTTGCCGAAGTACCTCGACGGATGGGACGGCCCGACTTACCAAG CTTAG
Upstream 100 bases:
>100_bases CACGGCCTATGCCTTCAAGTACCCGACCATGACCGGACAGCAGAACATGATCGGGGTGACGGTAGGCATCCGGCAGATCT TCTGACCAAAACCCTGTTCC
Downstream 100 bases:
>100_bases TTATGCAACGAACCTCGACGTGCCTTCGGAACTCGGCGCCGAGTGTGAGCGACTTGCGACACGTTCGCGAAAGATCGCAA TGGCCGGCTATCGACGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>_residues
Sequences:
>Translated_214_residues MSQPLRWPTAATVLFLGALRRFAGPGSDSEQATRDRHHGGKRTSSLEAHRSEASVNLRCAAAYNPGAQLGGEMTVPCSVQ CLCGAVNIKLNGQPQARANCHCRSCQDFYGTSMLSATAWLAEQVTVASGSVSSFSHPSKDLSRTFCSGCGETVFGTNRLG MRVLPNTIFARAAGGEVPEEMRPTMHLFYRHRIIDIQDELPKYLDGWDGPTYQA >Mature_213_residues SQPLRWPTAATVLFLGALRRFAGPGSDSEQATRDRHHGGKRTSSLEAHRSEASVNLRCAAAYNPGAQLGGEMTVPCSVQC LCGAVNIKLNGQPQARANCHCRSCQDFYGTSMLSATAWLAEQVTVASGSVSSFSHPSKDLSRTFCSGCGETVFGTNRLGM RVLPNTIFARAAGGEVPEEMRPTMHLFYRHRIIDIQDELPKYLDGWDGPTYQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23225; Mature: 23094
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPLRWPTAATVLFLGALRRFAGPGSDSEQATRDRHHGGKRTSSLEAHRSEASVNLRCA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEE AAYNPGAQLGGEMTVPCSVQCLCGAVNIKLNGQPQARANCHCRSCQDFYGTSMLSATAWL EECCCHHHCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEQVTVASGSVSSFSHPSKDLSRTFCSGCGETVFGTNRLGMRVLPNTIFARAAGGEVPEE HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCCCCCHH MRPTMHLFYRHRIIDIQDELPKYLDGWDGPTYQA HHHHHHHHHHHHEECCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQPLRWPTAATVLFLGALRRFAGPGSDSEQATRDRHHGGKRTSSLEAHRSEASVNLRCA CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEE AAYNPGAQLGGEMTVPCSVQCLCGAVNIKLNGQPQARANCHCRSCQDFYGTSMLSATAWL EECCCHHHCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEQVTVASGSVSSFSHPSKDLSRTFCSGCGETVFGTNRLGMRVLPNTIFARAAGGEVPEE HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCCCCCHH MRPTMHLFYRHRIIDIQDELPKYLDGWDGPTYQA HHHHHHHHHHHHEECCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA